RNA–Protein interactions for RNA: ENST00000482243.1

TRAIP-207, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-207ENST00000482243 SURF6O75683 361 aaKnown RBP17.42■□□□□ 0.38
TRAIP-207ENST00000482243 PCCAP05165 728 aaPredicted RBP17.42■□□□□ 0.38
TRAIP-207ENST00000482243 AK7Q96M32 723 aa17.42■□□□□ 0.38
TRAIP-207ENST00000482243 C4BP0C0L5 1744 aa17.41■□□□□ 0.38
TRAIP-207ENST00000482243 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
TRAIP-207ENST00000482243 APBA3O96018 575 aa17.41■□□□□ 0.38
TRAIP-207ENST00000482243 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
TRAIP-207ENST00000482243 EPHA10Q5JZY3 1008 aa17.41■□□□□ 0.38
TRAIP-207ENST00000482243 ZNF34Q8IZ26 560 aa17.41■□□□□ 0.38
TRAIP-207ENST00000482243 ZBTB38Q8NAP3 1195 aaPredicted RBP17.41■□□□□ 0.38
TRAIP-207ENST00000482243 LRRC4BQ9NT99 713 aa17.41■□□□□ 0.38
TRAIP-207ENST00000482243 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
TRAIP-207ENST00000482243 BCL11AQ9H165 835 aa17.4■□□□□ 0.38
TRAIP-207ENST00000482243 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
TRAIP-207ENST00000482243 SMARCA5O60264 1052 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-207ENST00000482243 FOXO4P98177 505 aa17.39■□□□□ 0.37
TRAIP-207ENST00000482243 OS9Q13438 667 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-207ENST00000482243 TXNRD1Q16881 649 aa17.39■□□□□ 0.37
TRAIP-207ENST00000482243 RABL6Q3YEC7 729 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-207ENST00000482243 CLEC4GQ6UXB4 293 aa17.39■□□□□ 0.37
TRAIP-207ENST00000482243 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
TRAIP-207ENST00000482243 TRMT112Q9UI30 125 aaKnown RBP17.39■□□□□ 0.37
TRAIP-207ENST00000482243 PLSCR1O15162 318 aa17.38■□□□□ 0.37
TRAIP-207ENST00000482243 RGL2O15211 777 aa17.38■□□□□ 0.37
TRAIP-207ENST00000482243 ZPR1O75312 459 aa17.38■□□□□ 0.37
TRAIP-207ENST00000482243 PARP10Q53GL7 1025 aa17.38■□□□□ 0.37
TRAIP-207ENST00000482243 LMBR1LQ6UX01 489 aa17.38■□□□□ 0.37
TRAIP-207ENST00000482243 SMIM5Q71RC9 77 aa17.38■□□□□ 0.37
TRAIP-207ENST00000482243 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
TRAIP-207ENST00000482243 NOP58Q9Y2X3 529 aaKnown RBP17.38■□□□□ 0.37
TRAIP-207ENST00000482243 TRAPPC3LQ5T215 181 aa17.37■□□□□ 0.37
TRAIP-207ENST00000482243 TSHZ2Q9NRE2 1034 aa17.37■□□□□ 0.37
TRAIP-207ENST00000482243 PA2G4Q9UQ80 394 aaKnown RBP17.37■□□□□ 0.37
TRAIP-207ENST00000482243 NIP7Q9Y221 180 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRAIP-207ENST00000482243 CHMP3Q9Y3E7 222 aa17.37■□□□□ 0.37
TRAIP-207ENST00000482243 UBN2Q6ZU65 1347 aa17.37■□□□□ 0.37
TRAIP-207ENST00000482243 CDHR2Q9BYE9 1310 aa17.37■□□□□ 0.37
TRAIP-207ENST00000482243 PHF14O94880 888 aa17.36■□□□□ 0.37
TRAIP-207ENST00000482243 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRAIP-207ENST00000482243 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
TRAIP-207ENST00000482243 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
TRAIP-207ENST00000482243 ERC1Q8IUD2 1116 aa17.36■□□□□ 0.37
TRAIP-207ENST00000482243 ARHGEF1Q92888 912 aaKnown RBP17.36■□□□□ 0.37
TRAIP-207ENST00000482243 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
TRAIP-207ENST00000482243 UTP14AQ9BVJ6 771 aaKnown RBP17.36■□□□□ 0.37
TRAIP-207ENST00000482243 PLA2G12BQ9BX93 195 aa17.36■□□□□ 0.37
TRAIP-207ENST00000482243 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
TRAIP-207ENST00000482243 ADRA2BP18089 450 aa17.35■□□□□ 0.37
TRAIP-207ENST00000482243 RFC4P35249 363 aa17.35■□□□□ 0.37
TRAIP-207ENST00000482243 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
TRAIP-207ENST00000482243 PROM2Q8N271 834 aa17.35■□□□□ 0.37
TRAIP-207ENST00000482243 RHPN1Q8TCX5 695 aa17.35■□□□□ 0.37
TRAIP-207ENST00000482243 SRP68Q9UHB9 627 aaKnown RBP17.35■□□□□ 0.37
TRAIP-207ENST00000482243 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
TRAIP-207ENST00000482243 IRS4O14654 1257 aaPredicted RBP17.34■□□□□ 0.37
TRAIP-207ENST00000482243 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
TRAIP-207ENST00000482243 SYNE4Q8N205 404 aa17.34■□□□□ 0.37
TRAIP-207ENST00000482243 TNS1Q9HBL0 1735 aaKnown RBP17.34■□□□□ 0.37
TRAIP-207ENST00000482243 SH3TC1Q8TE82 1336 aa17.33■□□□□ 0.36
TRAIP-207ENST00000482243 RFX5P48382 616 aaPredicted RBP17.33■□□□□ 0.36
TRAIP-207ENST00000482243 AMIGO3Q86WK7 504 aa17.33■□□□□ 0.36
TRAIP-207ENST00000482243 PLEKHM2Q8IWE5 1019 aa17.33■□□□□ 0.36
TRAIP-207ENST00000482243 BCL2L12Q9HB09 334 aa17.33■□□□□ 0.36
TRAIP-207ENST00000482243 COPRSQ9NQ92 184 aa17.33■□□□□ 0.36
TRAIP-207ENST00000482243 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.36
TRAIP-207ENST00000482243 MYH3P11055 1940 aa17.32■□□□□ 0.36
TRAIP-207ENST00000482243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.32■□□□□ 0.36
TRAIP-207ENST00000482243 PDE8AO60658 829 aa17.32■□□□□ 0.36
TRAIP-207ENST00000482243 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
TRAIP-207ENST00000482243 PTPN12Q05209 780 aaKnown RBP17.32■□□□□ 0.36
TRAIP-207ENST00000482243 BICDL1Q6ZP65 573 aa17.32■□□□□ 0.36
TRAIP-207ENST00000482243 SIL1Q9H173 461 aa17.32■□□□□ 0.36
TRAIP-207ENST00000482243 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
TRAIP-207ENST00000482243 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
TRAIP-207ENST00000482243 C4AP0C0L4 1744 aa17.31■□□□□ 0.36
TRAIP-207ENST00000482243 CSF1RP07333 972 aa17.31■□□□□ 0.36
TRAIP-207ENST00000482243 SSFA2P28290 1259 aa17.31■□□□□ 0.36
TRAIP-207ENST00000482243 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
TRAIP-207ENST00000482243 TBC1D9BQ66K14 1250 aa17.31■□□□□ 0.36
TRAIP-207ENST00000482243 KLHDC4Q8TBB5 520 aa17.31■□□□□ 0.36
TRAIP-207ENST00000482243 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
TRAIP-207ENST00000482243 SETDB2Q96T68 719 aa17.31■□□□□ 0.36
TRAIP-207ENST00000482243 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
TRAIP-207ENST00000482243 NTSR2O95665 410 aa17.3■□□□□ 0.36
TRAIP-207ENST00000482243 CTSWP56202 376 aa17.3■□□□□ 0.36
TRAIP-207ENST00000482243 CLASRPQ8N2M8 674 aaKnown RBP17.3■□□□□ 0.36
TRAIP-207ENST00000482243 HCLS1P14317 486 aaPredicted RBP17.29■□□□□ 0.36
TRAIP-207ENST00000482243 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
TRAIP-207ENST00000482243 TAF7LQ5H9L4 462 aa17.29■□□□□ 0.36
TRAIP-207ENST00000482243 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
TRAIP-207ENST00000482243 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
TRAIP-207ENST00000482243 NYXQ9GZU5 481 aa17.29■□□□□ 0.36
TRAIP-207ENST00000482243 RGPD3A6NKT7 1758 aaPredicted RBP17.29■□□□□ 0.36
TRAIP-207ENST00000482243 RGPD4Q7Z3J3 1758 aa17.29■□□□□ 0.36
TRAIP-207ENST00000482243 SASH1O94885 1247 aa17.28■□□□□ 0.36
TRAIP-207ENST00000482243 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
TRAIP-207ENST00000482243 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
TRAIP-207ENST00000482243 BMP2KLQ5H9B9 411 aa17.28■□□□□ 0.36
TRAIP-207ENST00000482243 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
TRAIP-207ENST00000482243 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms