RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 NPR1P16066 1061 aa13.74□□□□□ -0.21
DDX39B-220ENST00000482195 GTF2E1P29083 439 aaPredicted RBP13.74□□□□□ -0.21
DDX39B-220ENST00000482195 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
DDX39B-220ENST00000482195 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
DDX39B-220ENST00000482195 ZNF541Q9H0D2 1346 aa13.73□□□□□ -0.21
DDX39B-220ENST00000482195 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
DDX39B-220ENST00000482195 FKBP4Q02790 459 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX39B-220ENST00000482195 CLEC4GQ6UXB4 293 aa13.73□□□□□ -0.21
DDX39B-220ENST00000482195 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
DDX39B-220ENST00000482195 OLFM4Q6UX06 510 aa13.72□□□□□ -0.21
DDX39B-220ENST00000482195 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
DDX39B-220ENST00000482195 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-220ENST00000482195 CNTNAP1P78357 1384 aa13.71□□□□□ -0.21
DDX39B-220ENST00000482195 NGEFQ8N5V2 710 aa13.71□□□□□ -0.21
DDX39B-220ENST00000482195 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
DDX39B-220ENST00000482195 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
DDX39B-220ENST00000482195 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.21
DDX39B-220ENST00000482195 HACL1Q9UJ83 578 aa13.71□□□□□ -0.21
DDX39B-220ENST00000482195 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
DDX39B-220ENST00000482195 NBPF10Q6P3W6 841 aaKnown RBP13.7□□□□□ -0.22
DDX39B-220ENST00000482195 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
DDX39B-220ENST00000482195 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
DDX39B-220ENST00000482195 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
DDX39B-220ENST00000482195 ADAMTSL1Q8N6G6 1762 aa13.7□□□□□ -0.22
DDX39B-220ENST00000482195 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 PASKQ96RG2 1323 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 NEFMP07197 916 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 CHRM1P11229 460 aaPredicted RBP13.69□□□□□ -0.22
DDX39B-220ENST00000482195 PPP2R1AP30153 589 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
DDX39B-220ENST00000482195 HLFQ16534 295 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 ABCC12Q96J65 1359 aa13.69□□□□□ -0.22
DDX39B-220ENST00000482195 TMEM88BA6NKF7 163 aa13.68□□□□□ -0.22
DDX39B-220ENST00000482195 FOXN1O15353 648 aa13.68□□□□□ -0.22
DDX39B-220ENST00000482195 ALDH1B1P30837 517 aa13.68□□□□□ -0.22
DDX39B-220ENST00000482195 EPHX2P34913 555 aa13.68□□□□□ -0.22
DDX39B-220ENST00000482195 KIF6Q6ZMV9 814 aa13.68□□□□□ -0.22
DDX39B-220ENST00000482195 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
DDX39B-220ENST00000482195 SYNE4Q8N205 404 aa13.68□□□□□ -0.22
DDX39B-220ENST00000482195 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
DDX39B-220ENST00000482195 JDP2Q8WYK2 163 aa13.67□□□□□ -0.22
DDX39B-220ENST00000482195 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
DDX39B-220ENST00000482195 NYXQ9GZU5 481 aa13.67□□□□□ -0.22
DDX39B-220ENST00000482195 GJA3Q9Y6H8 435 aa13.67□□□□□ -0.22
DDX39B-220ENST00000482195 TRPM7Q96QT4 1865 aa13.67□□□□□ -0.22
DDX39B-220ENST00000482195 KLRG2A4D1S0 409 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-220ENST00000482195 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
DDX39B-220ENST00000482195 PRKCSHP14314 528 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-220ENST00000482195 GPTP24298 496 aa13.66□□□□□ -0.22
DDX39B-220ENST00000482195 VEGFBP49765 207 aa13.66□□□□□ -0.22
DDX39B-220ENST00000482195 MAP1SQ66K74 1059 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-220ENST00000482195 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
DDX39B-220ENST00000482195 LTBP1Q14766 1721 aa13.65□□□□□ -0.22
DDX39B-220ENST00000482195 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
DDX39B-220ENST00000482195 TCERG1O14776 1098 aaKnown RBP13.65□□□□□ -0.22
DDX39B-220ENST00000482195 MYL6BP14649 208 aa13.65□□□□□ -0.22
DDX39B-220ENST00000482195 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-220ENST00000482195 EIF6P56537 245 aaKnown RBP13.65□□□□□ -0.22
DDX39B-220ENST00000482195 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-220ENST00000482195 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
DDX39B-220ENST00000482195 ABT1Q9ULW3 272 aaKnown RBP13.65□□□□□ -0.22
DDX39B-220ENST00000482195 MAP3K15Q6ZN16 1313 aa13.64□□□□□ -0.23
DDX39B-220ENST00000482195 ANKRD36CQ5JPF3 1778 aa13.64□□□□□ -0.23
DDX39B-220ENST00000482195 COL4A5P29400 1685 aa13.64□□□□□ -0.23
DDX39B-220ENST00000482195 FZD9O00144 591 aa13.64□□□□□ -0.23
DDX39B-220ENST00000482195 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-220ENST00000482195 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
DDX39B-220ENST00000482195 GPC2Q8N158 579 aa13.64□□□□□ -0.23
DDX39B-220ENST00000482195 PNISRQ8TF01 805 aaKnown RBP13.64□□□□□ -0.23
DDX39B-220ENST00000482195 ITGBL1O95965 494 aaPredicted RBP13.63□□□□□ -0.23
DDX39B-220ENST00000482195 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
DDX39B-220ENST00000482195 LARGE2Q8N3Y3 721 aa13.63□□□□□ -0.23
DDX39B-220ENST00000482195 PSMD1Q99460 953 aa13.63□□□□□ -0.23
DDX39B-220ENST00000482195 LAMB2P55268 1798 aa13.63□□□□□ -0.23
DDX39B-220ENST00000482195 MAPK8IP3Q9UPT6 1336 aa13.63□□□□□ -0.23
DDX39B-220ENST00000482195 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
DDX39B-220ENST00000482195 PPEF1O14829 653 aaPredicted RBP13.62□□□□□ -0.23
DDX39B-220ENST00000482195 GRM1Q13255 1194 aa13.62□□□□□ -0.23
DDX39B-220ENST00000482195 RBM17Q96I25 401 aaKnown RBP13.62□□□□□ -0.23
DDX39B-220ENST00000482195 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
DDX39B-220ENST00000482195 PRDM10Q9NQV6 1147 aa13.62□□□□□ -0.23
DDX39B-220ENST00000482195 SNED1Q8TER0 1413 aa13.62□□□□□ -0.23
DDX39B-220ENST00000482195 UBN2Q6ZU65 1347 aa13.62□□□□□ -0.23
DDX39B-220ENST00000482195 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
DDX39B-220ENST00000482195 LBX1P52954 281 aa13.61□□□□□ -0.23
DDX39B-220ENST00000482195 DEFB115Q30KQ5 88 aa13.61□□□□□ -0.23
DDX39B-220ENST00000482195 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
DDX39B-220ENST00000482195 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
DDX39B-220ENST00000482195 NIM1KQ8IY84 436 aa13.61□□□□□ -0.23
DDX39B-220ENST00000482195 TMX4Q9H1E5 349 aaPredicted RBP13.61□□□□□ -0.23
DDX39B-220ENST00000482195 RIC1Q4ADV7 1423 aa13.61□□□□□ -0.23
DDX39B-220ENST00000482195 GTPBP6O43824 516 aaPredicted RBP13.6□□□□□ -0.23
DDX39B-220ENST00000482195 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
DDX39B-220ENST00000482195 SUSD4Q5VX71 490 aa13.6□□□□□ -0.23
DDX39B-220ENST00000482195 CC2D2BQ6DHV5 1058 aa13.6□□□□□ -0.23
DDX39B-220ENST00000482195 THSD7BQ9C0I4 1608 aa13.6□□□□□ -0.23
DDX39B-220ENST00000482195 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms