RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 C1orf115Q9H7X2 142 aa15.66■□□□□ 0.1
IFT88-206ENST00000482172 SCN7AQ01118 1682 aa15.66■□□□□ 0.1
IFT88-206ENST00000482172 ZPR1O75312 459 aa15.65■□□□□ 0.1
IFT88-206ENST00000482172 RFC4P35249 363 aa15.65■□□□□ 0.1
IFT88-206ENST00000482172 CASP7P55210 303 aa15.65■□□□□ 0.1
IFT88-206ENST00000482172 PARP10Q53GL7 1025 aa15.65■□□□□ 0.1
IFT88-206ENST00000482172 CEP85Q6P2H3 762 aa15.65■□□□□ 0.1
IFT88-206ENST00000482172 NLRP10Q86W26 655 aa15.65■□□□□ 0.1
IFT88-206ENST00000482172 LRRFIP2Q9Y608 721 aaKnown RBP15.65■□□□□ 0.1
IFT88-206ENST00000482172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.64■□□□□ 0.09
IFT88-206ENST00000482172 HMMRO75330 724 aa15.64■□□□□ 0.09
IFT88-206ENST00000482172 IGHDP01880 384 aa15.64■□□□□ 0.09
IFT88-206ENST00000482172 PCCAP05165 728 aaPredicted RBP15.64■□□□□ 0.09
IFT88-206ENST00000482172 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
IFT88-206ENST00000482172 EN1Q05925 392 aaPredicted RBP15.64■□□□□ 0.09
IFT88-206ENST00000482172 MTX1Q13505 466 aa15.64■□□□□ 0.09
IFT88-206ENST00000482172 EZH2Q15910 746 aaKnown RBP15.64■□□□□ 0.09
IFT88-206ENST00000482172 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
IFT88-206ENST00000482172 FLAD1Q8NFF5 587 aa15.64■□□□□ 0.09
IFT88-206ENST00000482172 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
IFT88-206ENST00000482172 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
IFT88-206ENST00000482172 SIRT2Q8IXJ6 389 aa15.63■□□□□ 0.09
IFT88-206ENST00000482172 ZBTB38Q8NAP3 1195 aaPredicted RBP15.63■□□□□ 0.09
IFT88-206ENST00000482172 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
IFT88-206ENST00000482172 ZNF827Q17R98 1081 aa15.62■□□□□ 0.09
IFT88-206ENST00000482172 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
IFT88-206ENST00000482172 UBE3BQ7Z3V4 1068 aa15.62■□□□□ 0.09
IFT88-206ENST00000482172 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
IFT88-206ENST00000482172 UBN2Q6ZU65 1347 aa15.62■□□□□ 0.09
IFT88-206ENST00000482172 CDHR2Q9BYE9 1310 aa15.62■□□□□ 0.09
IFT88-206ENST00000482172 PHF14O94880 888 aa15.61■□□□□ 0.09
IFT88-206ENST00000482172 GPTP24298 496 aa15.61■□□□□ 0.09
IFT88-206ENST00000482172 PPP1R42Q7Z4L9 355 aa15.61■□□□□ 0.09
IFT88-206ENST00000482172 GCC1Q96CN9 775 aa15.61■□□□□ 0.09
IFT88-206ENST00000482172 KAZALD1Q96I82 304 aa15.61■□□□□ 0.09
IFT88-206ENST00000482172 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
IFT88-206ENST00000482172 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
IFT88-206ENST00000482172 NIP7Q9Y221 180 aaKnown RBP eCLIP15.61■□□□□ 0.09
IFT88-206ENST00000482172 POLA2Q14181 598 aa15.6■□□□□ 0.09
IFT88-206ENST00000482172 RABL6Q3YEC7 729 aaPredicted RBP15.6■□□□□ 0.09
IFT88-206ENST00000482172 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
IFT88-206ENST00000482172 SMC5Q8IY18 1101 aa15.6■□□□□ 0.09
IFT88-206ENST00000482172 SSH3Q8TE77 659 aa15.6■□□□□ 0.09
IFT88-206ENST00000482172 UTP14AQ9BVJ6 771 aaKnown RBP15.6■□□□□ 0.09
IFT88-206ENST00000482172 SRP68Q9UHB9 627 aaKnown RBP15.6■□□□□ 0.09
IFT88-206ENST00000482172 EP400Q96L91 3159 aa15.6■□□□□ 0.09
IFT88-206ENST00000482172 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
IFT88-206ENST00000482172 SUSD4Q5VX71 490 aa15.59■□□□□ 0.09
IFT88-206ENST00000482172 BICC1Q9H694 974 aaKnown RBP15.59■□□□□ 0.09
IFT88-206ENST00000482172 DCTPP1Q9H773 170 aa15.59■□□□□ 0.09
IFT88-206ENST00000482172 TRMT112Q9UI30 125 aaKnown RBP15.59■□□□□ 0.09
IFT88-206ENST00000482172 QSER1Q2KHR3 1735 aa15.58■□□□□ 0.08
IFT88-206ENST00000482172 SLC15A2Q16348 729 aa15.58■□□□□ 0.08
IFT88-206ENST00000482172 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
IFT88-206ENST00000482172 DEFB132Q7Z7B7 95 aa15.58■□□□□ 0.08
IFT88-206ENST00000482172 SETDB2Q96T68 719 aa15.58■□□□□ 0.08
IFT88-206ENST00000482172 STK32BQ9NY57 414 aa15.58■□□□□ 0.08
IFT88-206ENST00000482172 SH3TC1Q8TE82 1336 aa15.58■□□□□ 0.08
IFT88-206ENST00000482172 PNMA6EA0A0J9YXQ4 647 aa15.57■□□□□ 0.08
IFT88-206ENST00000482172 NTSR2O95665 410 aa15.57■□□□□ 0.08
IFT88-206ENST00000482172 GYS1P13807 737 aa15.57■□□□□ 0.08
IFT88-206ENST00000482172 FOXO4P98177 505 aa15.57■□□□□ 0.08
IFT88-206ENST00000482172 COL23A1Q86Y22 540 aaPredicted RBP15.57■□□□□ 0.08
IFT88-206ENST00000482172 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
IFT88-206ENST00000482172 NYXQ9GZU5 481 aa15.57■□□□□ 0.08
IFT88-206ENST00000482172 COL24A1Q17RW2 1714 aa15.57■□□□□ 0.08
IFT88-206ENST00000482172 IRS4O14654 1257 aaPredicted RBP15.56■□□□□ 0.08
IFT88-206ENST00000482172 SRGAP3O43295 1099 aa15.56■□□□□ 0.08
IFT88-206ENST00000482172 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
IFT88-206ENST00000482172 JARID2Q92833 1246 aaPredicted RBP15.56■□□□□ 0.08
IFT88-206ENST00000482172 PNPLA7Q6ZV29 1317 aa15.56■□□□□ 0.08
IFT88-206ENST00000482172 TUBGCP6Q96RT7 1819 aa15.56■□□□□ 0.08
IFT88-206ENST00000482172 PDE8AO60658 829 aa15.55■□□□□ 0.08
IFT88-206ENST00000482172 CSF1RP07333 972 aa15.55■□□□□ 0.08
IFT88-206ENST00000482172 NLGN1Q8N2Q7 840 aa15.55■□□□□ 0.08
IFT88-206ENST00000482172 UPF1Q92900 1129 aaKnown RBP eCLIP15.55■□□□□ 0.08
IFT88-206ENST00000482172 CARMIL3Q8ND23 1372 aa15.54■□□□□ 0.08
IFT88-206ENST00000482172 TM4SF1P30408 202 aa15.54■□□□□ 0.08
IFT88-206ENST00000482172 NFIXQ14938 502 aa15.54■□□□□ 0.08
IFT88-206ENST00000482172 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
IFT88-206ENST00000482172 SLC10A5Q5PT55 438 aa15.54■□□□□ 0.08
IFT88-206ENST00000482172 LMBR1LQ6UX01 489 aa15.54■□□□□ 0.08
IFT88-206ENST00000482172 TPTE2Q6XPS3 522 aa15.54■□□□□ 0.08
IFT88-206ENST00000482172 ANO8Q9HCE9 1232 aaPredicted RBP15.54■□□□□ 0.08
IFT88-206ENST00000482172 NOP58Q9Y2X3 529 aaKnown RBP15.54■□□□□ 0.08
IFT88-206ENST00000482172 NUCB1Q02818 461 aa15.53■□□□□ 0.08
IFT88-206ENST00000482172 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
IFT88-206ENST00000482172 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
IFT88-206ENST00000482172 LAMB2P55268 1798 aa15.53■□□□□ 0.08
IFT88-206ENST00000482172 RAB11FIP3O75154 756 aa15.52■□□□□ 0.08
IFT88-206ENST00000482172 RFX5P48382 616 aaPredicted RBP15.52■□□□□ 0.08
IFT88-206ENST00000482172 CTSWP56202 376 aa15.52■□□□□ 0.08
IFT88-206ENST00000482172 NBPF5PQ86XG9 351 aaPredicted RBP15.52■□□□□ 0.08
IFT88-206ENST00000482172 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
IFT88-206ENST00000482172 COPRSQ9NQ92 184 aa15.52■□□□□ 0.08
IFT88-206ENST00000482172 PDZRN3Q9UPQ7 1066 aa15.52■□□□□ 0.08
IFT88-206ENST00000482172 TTLL11Q8NHH1 800 aa15.51■□□□□ 0.07
IFT88-206ENST00000482172 RIC1Q4ADV7 1423 aa15.51■□□□□ 0.07
IFT88-206ENST00000482172 MYH3P11055 1940 aa15.51■□□□□ 0.07
IFT88-206ENST00000482172 FAM177BA6PVY3 158 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms