RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 UBN2Q6ZU65 1347 aa24.56■■□□□ 1.52
SEMA4D-218ENST00000482128 NFIXQ14938 502 aa24.55■■□□□ 1.52
SEMA4D-218ENST00000482128 UTP14AQ9BVJ6 771 aaKnown RBP24.54■■□□□ 1.52
SEMA4D-218ENST00000482128 NYXQ9GZU5 481 aa24.54■■□□□ 1.52
SEMA4D-218ENST00000482128 PSDA5PKW4 1024 aaPredicted RBP24.53■■□□□ 1.52
SEMA4D-218ENST00000482128 GRM8O00222 908 aa24.53■■□□□ 1.52
SEMA4D-218ENST00000482128 GNAI3P08754 354 aa24.53■■□□□ 1.52
SEMA4D-218ENST00000482128 MSL1Q68DK7 614 aa24.53■■□□□ 1.52
SEMA4D-218ENST00000482128 CRBNQ96SW2 442 aa24.53■■□□□ 1.52
SEMA4D-218ENST00000482128 TRMT112Q9UI30 125 aaKnown RBP24.53■■□□□ 1.52
SEMA4D-218ENST00000482128 HDAC5Q9UQL6 1122 aa24.53■■□□□ 1.52
SEMA4D-218ENST00000482128 TM4SF1P30408 202 aa24.52■■□□□ 1.52
SEMA4D-218ENST00000482128 NBPF5PQ86XG9 351 aaPredicted RBP24.52■■□□□ 1.52
SEMA4D-218ENST00000482128 PDGFDQ9GZP0 370 aaPredicted RBP24.52■■□□□ 1.52
SEMA4D-218ENST00000482128 NPHP1O15259 732 aa24.51■■□□□ 1.51
SEMA4D-218ENST00000482128 PCCAP05165 728 aaPredicted RBP24.51■■□□□ 1.51
SEMA4D-218ENST00000482128 IRX6P78412 446 aaPredicted RBP24.51■■□□□ 1.51
SEMA4D-218ENST00000482128 SUSD4Q5VX71 490 aa24.51■■□□□ 1.51
SEMA4D-218ENST00000482128 ZBTB38Q8NAP3 1195 aaPredicted RBP24.51■■□□□ 1.51
SEMA4D-218ENST00000482128 MTFR1LQ9H019 292 aa24.51■■□□□ 1.51
SEMA4D-218ENST00000482128 CASZ1Q86V15 1759 aa24.51■■□□□ 1.51
SEMA4D-218ENST00000482128 AFDNP55196 1824 aaKnown RBP24.51■■□□□ 1.51
SEMA4D-218ENST00000482128 FAM177BA6PVY3 158 aa24.5■■□□□ 1.51
SEMA4D-218ENST00000482128 MMP10P09238 476 aa24.5■■□□□ 1.51
SEMA4D-218ENST00000482128 UBTFL1P0CB47 393 aaPredicted RBP24.5■■□□□ 1.51
SEMA4D-218ENST00000482128 HSP90B1P14625 803 aaKnown RBP24.5■■□□□ 1.51
SEMA4D-218ENST00000482128 GTF2E1P29083 439 aaPredicted RBP24.5■■□□□ 1.51
SEMA4D-218ENST00000482128 TPTE2Q6XPS3 522 aa24.5■■□□□ 1.51
SEMA4D-218ENST00000482128 USP44Q9H0E7 712 aa24.5■■□□□ 1.51
SEMA4D-218ENST00000482128 PARP3Q9Y6F1 533 aa24.5■■□□□ 1.51
SEMA4D-218ENST00000482128 ZBTB7BO15156 539 aaPredicted RBP24.49■■□□□ 1.51
SEMA4D-218ENST00000482128 NTSR2O95665 410 aa24.49■■□□□ 1.51
SEMA4D-218ENST00000482128 UBE3BQ7Z3V4 1068 aa24.49■■□□□ 1.51
SEMA4D-218ENST00000482128 MEIS3Q99687 375 aa24.49■■□□□ 1.51
SEMA4D-218ENST00000482128 UTYO14607 1347 aa24.49■■□□□ 1.51
SEMA4D-218ENST00000482128 SH3TC1Q8TE82 1336 aa24.49■■□□□ 1.51
SEMA4D-218ENST00000482128 COL24A1Q17RW2 1714 aa24.49■■□□□ 1.51
SEMA4D-218ENST00000482128 H7C1W4 665 aa24.48■■□□□ 1.51
SEMA4D-218ENST00000482128 POLRMTO00411 1230 aaKnown RBP24.48■■□□□ 1.51
SEMA4D-218ENST00000482128 ZBTB7AO95365 584 aa24.48■■□□□ 1.51
SEMA4D-218ENST00000482128 SERPINB2P05120 415 aa24.48■■□□□ 1.51
SEMA4D-218ENST00000482128 DDR1Q08345 913 aa24.48■■□□□ 1.51
SEMA4D-218ENST00000482128 AAMPQ13685 434 aa24.48■■□□□ 1.51
SEMA4D-218ENST00000482128 CNBD1Q8NA66 436 aa24.48■■□□□ 1.51
SEMA4D-218ENST00000482128 CDHR2Q9BYE9 1310 aa24.47■■□□□ 1.51
SEMA4D-218ENST00000482128 NBPF7P0C2Y1 421 aaPredicted RBP24.46■■□□□ 1.51
SEMA4D-218ENST00000482128 POLD1P28340 1107 aa24.46■■□□□ 1.51
SEMA4D-218ENST00000482128 FAM89AQ96GI7 184 aa24.46■■□□□ 1.51
SEMA4D-218ENST00000482128 GNAI2P04899 355 aa24.45■■□□□ 1.5
SEMA4D-218ENST00000482128 ST5P78524 1137 aa24.45■■□□□ 1.5
SEMA4D-218ENST00000482128 RTL5Q5HYW3 569 aaPredicted RBP24.45■■□□□ 1.5
SEMA4D-218ENST00000482128 EXOC6Q8TAG9 804 aa24.45■■□□□ 1.5
SEMA4D-218ENST00000482128 ZBTB40Q9NUA8 1239 aa24.44■■□□□ 1.5
SEMA4D-218ENST00000482128 IRS4O14654 1257 aaPredicted RBP24.43■■□□□ 1.5
SEMA4D-218ENST00000482128 CASP7P55210 303 aa24.43■■□□□ 1.5
SEMA4D-218ENST00000482128 NUTM1Q86Y26 1132 aa24.43■■□□□ 1.5
SEMA4D-218ENST00000482128 ERFEQ4G0M1 354 aa24.42■■□□□ 1.5
SEMA4D-218ENST00000482128 PRR5LQ6MZQ0 368 aa24.42■■□□□ 1.5
SEMA4D-218ENST00000482128 JARID2Q92833 1246 aaPredicted RBP24.42■■□□□ 1.5
SEMA4D-218ENST00000482128 ATF5Q9Y2D1 282 aaPredicted RBP24.42■■□□□ 1.5
SEMA4D-218ENST00000482128 SUCLG2Q96I99 432 aa24.41■■□□□ 1.5
SEMA4D-218ENST00000482128 PLA2G12BQ9BX93 195 aa24.41■■□□□ 1.5
SEMA4D-218ENST00000482128 LRRFIP2Q9Y608 721 aaKnown RBP24.41■■□□□ 1.5
SEMA4D-218ENST00000482128 PDE8AO60658 829 aa24.4■■□□□ 1.5
SEMA4D-218ENST00000482128 SLC10A5Q5PT55 438 aa24.4■■□□□ 1.5
SEMA4D-218ENST00000482128 RIC1Q4ADV7 1423 aa24.39■■□□□ 1.5
SEMA4D-218ENST00000482128 ERICH6BQ5W0A0 696 aa24.39■■□□□ 1.49
SEMA4D-218ENST00000482128 ABCC12Q96J65 1359 aa24.39■■□□□ 1.49
SEMA4D-218ENST00000482128 HCLS1P14317 486 aaPredicted RBP24.38■■□□□ 1.49
SEMA4D-218ENST00000482128 SYNE4Q8N205 404 aa24.38■■□□□ 1.49
SEMA4D-218ENST00000482128 C1orf115Q9H7X2 142 aa24.38■■□□□ 1.49
SEMA4D-218ENST00000482128 SPON1Q9HCB6 807 aa24.38■■□□□ 1.49
SEMA4D-218ENST00000482128 NRXN2Q9P2S2 1712 aa24.38■■□□□ 1.49
SEMA4D-218ENST00000482128 NLRP3Q96P20 1036 aa24.37■■□□□ 1.49
SEMA4D-218ENST00000482128 BICC1Q9H694 974 aaKnown RBP24.37■■□□□ 1.49
SEMA4D-218ENST00000482128 CTSWP56202 376 aa24.36■■□□□ 1.49
SEMA4D-218ENST00000482128 CCDC24Q8N4L8 307 aa24.35■■□□□ 1.49
SEMA4D-218ENST00000482128 BRIP1Q9BX63 1249 aa24.35■■□□□ 1.49
SEMA4D-218ENST00000482128 LAMB2P55268 1798 aa24.34■■□□□ 1.49
SEMA4D-218ENST00000482128 FOXO4P98177 505 aa24.34■■□□□ 1.49
SEMA4D-218ENST00000482128 RABL6Q3YEC7 729 aaPredicted RBP24.34■■□□□ 1.49
SEMA4D-218ENST00000482128 RPAP2Q8IXW5 612 aaPredicted RBP24.34■■□□□ 1.49
SEMA4D-218ENST00000482128 KAZALD1Q96I82 304 aa24.34■■□□□ 1.49
SEMA4D-218ENST00000482128 PDE6BP35913 854 aa24.33■■□□□ 1.49
SEMA4D-218ENST00000482128 CCDC152Q4G0S7 254 aa24.33■■□□□ 1.49
SEMA4D-218ENST00000482128 EPHA10Q5JZY3 1008 aa24.33■■□□□ 1.49
SEMA4D-218ENST00000482128 ANKRD44Q8N8A2 993 aa24.33■■□□□ 1.49
SEMA4D-218ENST00000482128 SGIP1Q9BQI5 828 aa24.33■■□□□ 1.49
SEMA4D-218ENST00000482128 PTGER2P43116 358 aa24.32■■□□□ 1.48
SEMA4D-218ENST00000482128 MTX1Q13505 466 aa24.32■■□□□ 1.48
SEMA4D-218ENST00000482128 CEP85Q6P2H3 762 aa24.32■■□□□ 1.48
SEMA4D-218ENST00000482128 LMBR1LQ6UX01 489 aa24.32■■□□□ 1.48
SEMA4D-218ENST00000482128 PDZRN3Q9UPQ7 1066 aa24.32■■□□□ 1.48
SEMA4D-218ENST00000482128 CHMP3Q9Y3E7 222 aa24.32■■□□□ 1.48
SEMA4D-218ENST00000482128 C10orf71Q711Q0 1435 aa24.32■■□□□ 1.48
SEMA4D-218ENST00000482128 HMMRO75330 724 aa24.31■■□□□ 1.48
SEMA4D-218ENST00000482128 CSF1RP07333 972 aa24.31■■□□□ 1.48
SEMA4D-218ENST00000482128 SF3B3Q15393 1217 aaKnown RBP24.31■■□□□ 1.48
SEMA4D-218ENST00000482128 DDX60Q8IY21 1712 aaKnown RBP24.31■■□□□ 1.48
SEMA4D-218ENST00000482128 TTLL11Q8NHH1 800 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms