RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PDE3AQ14432 1141 aa14.63□□□□□ -0.07
HPS4-212ENST00000481910 CWF19L2Q2TBE0 894 aaKnown RBP14.63□□□□□ -0.07
HPS4-212ENST00000481910 C20orf194Q5TEA3 1177 aa14.63□□□□□ -0.07
HPS4-212ENST00000481910 TBC1D9BQ66K14 1250 aa14.63□□□□□ -0.07
HPS4-212ENST00000481910 NLGN1Q8N2Q7 840 aa14.63□□□□□ -0.07
HPS4-212ENST00000481910 SCN7AQ01118 1682 aa14.63□□□□□ -0.07
HPS4-212ENST00000481910 CCT4P50991 539 aaKnown RBP14.62□□□□□ -0.07
HPS4-212ENST00000481910 ZNF34Q8IZ26 560 aa14.62□□□□□ -0.07
HPS4-212ENST00000481910 TMEM57Q8N5G2 664 aa14.62□□□□□ -0.07
HPS4-212ENST00000481910 IGKV5-2P06315 115 aa14.62□□□□□ -0.07
HPS4-212ENST00000481910 INTS3Q68E01 1043 aaKnown RBP14.62□□□□□ -0.07
HPS4-212ENST00000481910 SLC16A10Q8TF71 515 aa14.62□□□□□ -0.07
HPS4-212ENST00000481910 SETDB2Q96T68 719 aa14.62□□□□□ -0.07
HPS4-212ENST00000481910 NEURL1BA8MQ27 555 aa14.61□□□□□ -0.07
HPS4-212ENST00000481910 MSL1Q68DK7 614 aa14.61□□□□□ -0.07
HPS4-212ENST00000481910 ITPRIPQ8IWB1 547 aa14.61□□□□□ -0.07
HPS4-212ENST00000481910 ISCA1Q9BUE6 129 aa14.61□□□□□ -0.07
HPS4-212ENST00000481910 COG6Q9Y2V7 657 aa14.61□□□□□ -0.07
HPS4-212ENST00000481910 ATP10DQ9P241 1426 aa14.61□□□□□ -0.07
HPS4-212ENST00000481910 PXDNLA1KZ92 1463 aa14.61□□□□□ -0.07
HPS4-212ENST00000481910 ALDH1L1O75891 902 aa14.6□□□□□ -0.07
HPS4-212ENST00000481910 TRIM28Q13263 835 aaKnown RBP14.6□□□□□ -0.07
HPS4-212ENST00000481910 AAMPQ13685 434 aa14.6□□□□□ -0.07
HPS4-212ENST00000481910 NFIXQ14938 502 aa14.6□□□□□ -0.07
HPS4-212ENST00000481910 CCDC191Q8NCU4 936 aa14.6□□□□□ -0.07
HPS4-212ENST00000481910 ANKRD36CQ5JPF3 1778 aa14.6□□□□□ -0.07
HPS4-212ENST00000481910 PARP10Q53GL7 1025 aa14.6□□□□□ -0.07
HPS4-212ENST00000481910 NLRP10Q86W26 655 aa14.6□□□□□ -0.07
HPS4-212ENST00000481910 CWC25Q9NXE8 425 aaPredicted RBP14.6□□□□□ -0.07
HPS4-212ENST00000481910 UBN2Q6ZU65 1347 aa14.6□□□□□ -0.07
HPS4-212ENST00000481910 AFDNP55196 1824 aaKnown RBP14.59□□□□□ -0.07
HPS4-212ENST00000481910 FAM177BA6PVY3 158 aa14.59□□□□□ -0.07
HPS4-212ENST00000481910 TM4SF1P30408 202 aa14.59□□□□□ -0.07
HPS4-212ENST00000481910 GCKRQ14397 625 aa14.59□□□□□ -0.07
HPS4-212ENST00000481910 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
HPS4-212ENST00000481910 ZBTB7AO95365 584 aa14.58□□□□□ -0.07
HPS4-212ENST00000481910 MVPQ14764 893 aaKnown RBP14.58□□□□□ -0.07
HPS4-212ENST00000481910 SUSD4Q5VX71 490 aa14.58□□□□□ -0.07
HPS4-212ENST00000481910 PPP1R42Q7Z4L9 355 aa14.58□□□□□ -0.07
HPS4-212ENST00000481910 C9orf78Q9NZ63 289 aaPredicted RBP14.58□□□□□ -0.07
HPS4-212ENST00000481910 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.08
HPS4-212ENST00000481910 TRMT112Q9UI30 125 aaKnown RBP14.58□□□□□ -0.08
HPS4-212ENST00000481910 CARMIL3Q8ND23 1372 aa14.57□□□□□ -0.08
HPS4-212ENST00000481910 CASZ1Q86V15 1759 aa14.57□□□□□ -0.08
HPS4-212ENST00000481910 NPHP1O15259 732 aa14.57□□□□□ -0.08
HPS4-212ENST00000481910 MMP10P09238 476 aa14.57□□□□□ -0.08
HPS4-212ENST00000481910 RTL5Q5HYW3 569 aaPredicted RBP14.57□□□□□ -0.08
HPS4-212ENST00000481910 NBPF5PQ86XG9 351 aaPredicted RBP14.57□□□□□ -0.08
HPS4-212ENST00000481910 UTP14AQ9BVJ6 771 aaKnown RBP14.57□□□□□ -0.08
HPS4-212ENST00000481910 MTFR1LQ9H019 292 aa14.57□□□□□ -0.08
HPS4-212ENST00000481910 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
HPS4-212ENST00000481910 SERPINB2P05120 415 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
HPS4-212ENST00000481910 TPTE2Q6XPS3 522 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 JARID2Q92833 1246 aaPredicted RBP14.56□□□□□ -0.08
HPS4-212ENST00000481910 USP44Q9H0E7 712 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 DDX19BQ9UMR2 479 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 PARP3Q9Y6F1 533 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 N4BP2Q86UW6 1770 aaPredicted RBP14.56□□□□□ -0.08
HPS4-212ENST00000481910 GRM8O00222 908 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 POLRMTO00411 1230 aaKnown RBP14.56□□□□□ -0.08
HPS4-212ENST00000481910 DDR1Q08345 913 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 ZBTB38Q8NAP3 1195 aaPredicted RBP14.56□□□□□ -0.08
HPS4-212ENST00000481910 FAM89AQ96GI7 184 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 NYXQ9GZU5 481 aa14.56□□□□□ -0.08
HPS4-212ENST00000481910 ZBTB7BO15156 539 aaPredicted RBP14.55□□□□□ -0.08
HPS4-212ENST00000481910 NBPF7P0C2Y1 421 aaPredicted RBP14.55□□□□□ -0.08
HPS4-212ENST00000481910 UBE3BQ7Z3V4 1068 aa14.55□□□□□ -0.08
HPS4-212ENST00000481910 CRBNQ96SW2 442 aa14.55□□□□□ -0.08
HPS4-212ENST00000481910 H7C1W4 665 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 NTSR2O95665 410 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 PCCAP05165 728 aaPredicted RBP14.54□□□□□ -0.08
HPS4-212ENST00000481910 NUTM1Q86Y26 1132 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 MEIS3Q99687 375 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 SH3TC1Q8TE82 1336 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 GNAI3P08754 354 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 UBTFL1P0CB47 393 aaPredicted RBP14.54□□□□□ -0.08
HPS4-212ENST00000481910 TMEM132AQ24JP5 1023 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 SYNE4Q8N205 404 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 CNBD1Q8NA66 436 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 CCDC136Q96JN2 1154 aa14.54□□□□□ -0.08
HPS4-212ENST00000481910 CHMP4BQ9H444 224 aaKnown RBP14.54□□□□□ -0.08
HPS4-212ENST00000481910 IBTKQ9P2D0 1353 aaPredicted RBP14.54□□□□□ -0.08
HPS4-212ENST00000481910 POLD1P28340 1107 aa14.53□□□□□ -0.08
HPS4-212ENST00000481910 COL24A1Q17RW2 1714 aa14.53□□□□□ -0.08
HPS4-212ENST00000481910 UTYO14607 1347 aa14.53□□□□□ -0.08
HPS4-212ENST00000481910 ERFEQ4G0M1 354 aa14.53□□□□□ -0.08
HPS4-212ENST00000481910 CCDC24Q8N4L8 307 aa14.53□□□□□ -0.08
HPS4-212ENST00000481910 IRS4O14654 1257 aaPredicted RBP14.52□□□□□ -0.09
HPS4-212ENST00000481910 PRR5LQ6MZQ0 368 aa14.52□□□□□ -0.09
HPS4-212ENST00000481910 HDAC5Q9UQL6 1122 aa14.52□□□□□ -0.09
HPS4-212ENST00000481910 CASP7P55210 303 aa14.51□□□□□ -0.09
HPS4-212ENST00000481910 ST5P78524 1137 aa14.51□□□□□ -0.09
HPS4-212ENST00000481910 EXOC6Q8TAG9 804 aa14.51□□□□□ -0.09
HPS4-212ENST00000481910 SPON1Q9HCB6 807 aa14.51□□□□□ -0.09
HPS4-212ENST00000481910 CDHR2Q9BYE9 1310 aa14.51□□□□□ -0.09
HPS4-212ENST00000481910 HCLS1P14317 486 aaPredicted RBP14.51□□□□□ -0.09
HPS4-212ENST00000481910 ZBTB40Q9NUA8 1239 aa14.51□□□□□ -0.09
HPS4-212ENST00000481910 HSP90B1P14625 803 aaKnown RBP14.5□□□□□ -0.09
HPS4-212ENST00000481910 SUCLG2Q96I99 432 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms