RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 TEAD4Q15561 434 aa4.83□□□□□ -1.64
USH2A-204ENST00000481786 GRIK5Q16478 980 aa4.83□□□□□ -1.64
USH2A-204ENST00000481786 TMEM132AQ24JP5 1023 aa4.83□□□□□ -1.64
USH2A-204ENST00000481786 PLPP7Q8NBV4 271 aa4.83□□□□□ -1.64
USH2A-204ENST00000481786 DNAJB12Q9NXW2 375 aaKnown RBP4.83□□□□□ -1.64
USH2A-204ENST00000481786 TBC1D2BQ9UPU7 963 aa4.83□□□□□ -1.64
USH2A-204ENST00000481786 KCNH4Q9UQ05 1017 aa4.83□□□□□ -1.64
USH2A-204ENST00000481786 TGFB1P01137 390 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 JAG1P78504 1218 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 NEUROD1Q13562 356 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 MSL1Q68DK7 614 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 FBXO11Q86XK2 927 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 TNS4Q8IZW8 715 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 RHPN1Q8TCX5 695 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 ZNF358Q9NW07 568 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 ZNF232Q9UNY5 417 aa4.82□□□□□ -1.64
USH2A-204ENST00000481786 APBB1O00213 710 aa4.81□□□□□ -1.64
USH2A-204ENST00000481786 DEAF1O75398 565 aaPredicted RBP4.81□□□□□ -1.64
USH2A-204ENST00000481786 EPHA4P54764 986 aa4.81□□□□□ -1.64
USH2A-204ENST00000481786 KCNQ4P56696 695 aa4.81□□□□□ -1.64
USH2A-204ENST00000481786 EIF4G2P78344 907 aaKnown RBP eCLIP4.81□□□□□ -1.64
USH2A-204ENST00000481786 TYRO3Q06418 890 aa4.81□□□□□ -1.64
USH2A-204ENST00000481786 SLC9A9Q8IVB4 645 aa4.81□□□□□ -1.64
USH2A-204ENST00000481786 DZIP1LQ8IYY4 767 aaKnown RBP4.81□□□□□ -1.64
USH2A-204ENST00000481786 HCN4Q9Y3Q4 1203 aa4.81□□□□□ -1.64
USH2A-204ENST00000481786 KIAA1324LA8MWY0 1029 aaPredicted RBP4.8□□□□□ -1.64
USH2A-204ENST00000481786 PIK3CDO00329 1044 aa4.8□□□□□ -1.64
USH2A-204ENST00000481786 RGS9O75916 674 aaPredicted RBP4.8□□□□□ -1.64
USH2A-204ENST00000481786 VAC14Q08AM6 782 aa4.8□□□□□ -1.64
USH2A-204ENST00000481786 MCM6Q14566 821 aa4.8□□□□□ -1.64
USH2A-204ENST00000481786 SUSD3Q96L08 255 aa4.79□□□□□ -1.64
USH2A-204ENST00000481786 LPIN3Q9BQK8 851 aa4.79□□□□□ -1.64
USH2A-204ENST00000481786 SERTM1A2A2V5 107 aa4.78□□□□□ -1.64
USH2A-204ENST00000481786 ZBTB42B2RXF5 422 aa4.78□□□□□ -1.64
USH2A-204ENST00000481786 CPB1P15086 417 aa4.78□□□□□ -1.64
USH2A-204ENST00000481786 MAP7D1Q3KQU3 841 aa4.78□□□□□ -1.64
USH2A-204ENST00000481786 IGF2-ASQ6U949 168 aa4.78□□□□□ -1.64
USH2A-204ENST00000481786 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
USH2A-204ENST00000481786 BACH1O14867 736 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 NFKB1P19838 968 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 MLLT1Q03111 559 aaPredicted RBP4.77□□□□□ -1.65
USH2A-204ENST00000481786 PERM1Q5SV97 790 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 FAM35AQ86V20 835 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 AGGF1Q8N302 714 aaeCLIP4.77□□□□□ -1.65
USH2A-204ENST00000481786 GSX2Q9BZM3 304 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 PHACTR1Q9C0D0 580 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 AKTIPQ9H8T0 292 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 GDPD2Q9HCC8 539 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 PRM3Q9NNZ6 103 aa4.77□□□□□ -1.65
USH2A-204ENST00000481786 DLL1O00548 723 aa4.76□□□□□ -1.65
USH2A-204ENST00000481786 SPINK2P20155 84 aa4.76□□□□□ -1.65
USH2A-204ENST00000481786 GRNP28799 593 aaKnown RBP4.76□□□□□ -1.65
USH2A-204ENST00000481786 WFDC8Q8IUA0 241 aa4.76□□□□□ -1.65
USH2A-204ENST00000481786 GPC6Q9Y625 555 aaPredicted RBP4.76□□□□□ -1.65
USH2A-204ENST00000481786 F8W735 103 aaPredicted RBP4.75□□□□□ -1.65
USH2A-204ENST00000481786 IGLV1-40P01703 118 aa4.75□□□□□ -1.65
USH2A-204ENST00000481786 ABL2P42684 1182 aa4.75□□□□□ -1.65
USH2A-204ENST00000481786 GTF2IP78347 998 aa4.75□□□□□ -1.65
USH2A-204ENST00000481786 FLIIQ13045 1269 aa4.75□□□□□ -1.65
USH2A-204ENST00000481786 DTWD1Q8N5C7 304 aa4.75□□□□□ -1.65
USH2A-204ENST00000481786 TSPAN10Q9H1Z9 355 aaPredicted RBP4.75□□□□□ -1.65
USH2A-204ENST00000481786 ADGRE2Q9UHX3 823 aa4.75□□□□□ -1.65
USH2A-204ENST00000481786 COG6Q9Y2V7 657 aa4.75□□□□□ -1.65
USH2A-204ENST00000481786 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.75□□□□□ -1.65
USH2A-204ENST00000481786 PSME1Q06323 249 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 OGFOD2Q6N063 350 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 HFE2Q6ZVN8 426 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 BTLAQ7Z6A9 289 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 SLC51AQ86UW1 340 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 ZDHHC13Q8IUH4 622 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 POM121Q96HA1 1249 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 UBL7Q96S82 380 aaPredicted RBP4.74□□□□□ -1.65
USH2A-204ENST00000481786 ZFATQ9P243 1243 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 RAXQ9Y2V3 346 aa4.74□□□□□ -1.65
USH2A-204ENST00000481786 C1orf53Q5VUE5 145 aa4.73□□□□□ -1.65
USH2A-204ENST00000481786 KRT25Q7Z3Z0 450 aa4.73□□□□□ -1.65
USH2A-204ENST00000481786 KRTAP4-5Q9BYR2 181 aa4.73□□□□□ -1.65
USH2A-204ENST00000481786 ANKIB1Q9P2G1 1089 aa4.73□□□□□ -1.65
USH2A-204ENST00000481786 PRR19A6NJB7 356 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 PTCD1O75127 700 aaKnown RBP4.72□□□□□ -1.65
USH2A-204ENST00000481786 C8AP07357 584 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 CCINQ13939 588 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 WASHC4Q2M389 1173 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 ELMSAN1Q6PJG2 1045 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 DEPDC4Q8N2C3 294 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 PNMA5Q96PV4 448 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 KRTAP17-1Q9BYP8 105 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 SMG9Q9H0W8 520 aaKnown RBP4.72□□□□□ -1.65
USH2A-204ENST00000481786 KIAA1024Q9UPX6 916 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 NOD1Q9Y239 953 aa4.72□□□□□ -1.65
USH2A-204ENST00000481786 GLB1P16278 677 aa4.71□□□□□ -1.66
USH2A-204ENST00000481786 UBTFP17480 764 aaKnown RBP4.71□□□□□ -1.66
USH2A-204ENST00000481786 TARSP26639 723 aaKnown RBP4.71□□□□□ -1.66
USH2A-204ENST00000481786 POTEAQ6S8J7 498 aa4.71□□□□□ -1.66
USH2A-204ENST00000481786 Q6ZS46 218 aa4.71□□□□□ -1.66
USH2A-204ENST00000481786 DTX1Q86Y01 620 aa4.71□□□□□ -1.66
USH2A-204ENST00000481786 ARMC10Q8N2F6 343 aa4.71□□□□□ -1.66
USH2A-204ENST00000481786 TMEM130Q8N3G9 435 aa4.71□□□□□ -1.66
USH2A-204ENST00000481786 STOML1Q9UBI4 398 aa4.71□□□□□ -1.66
USH2A-204ENST00000481786 BCS1LQ9Y276 419 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms