RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ZNF772Q68DY9 489 aaPredicted RBP22.91■■□□□ 1.26
CCM2-214ENST00000481194 TNNQ9UQP3 1299 aa22.91■■□□□ 1.26
CCM2-214ENST00000481194 GNPATO15228 680 aa22.91■■□□□ 1.26
CCM2-214ENST00000481194 RAD21O60216 631 aa22.91■■□□□ 1.26
CCM2-214ENST00000481194 ABCF2Q9UG63 623 aa22.91■■□□□ 1.26
CCM2-214ENST00000481194 PIP4K2AP48426 406 aaPredicted RBP22.9■■□□□ 1.26
CCM2-214ENST00000481194 ATP2B3Q16720 1220 aa22.9■■□□□ 1.26
CCM2-214ENST00000481194 CDKL5O76039 1030 aa22.9■■□□□ 1.26
CCM2-214ENST00000481194 PDE1AP54750 535 aa22.9■■□□□ 1.26
CCM2-214ENST00000481194 KIF13AQ9H1H9 1805 aa22.9■■□□□ 1.26
CCM2-214ENST00000481194 CHAF1AQ13111 956 aaPredicted RBP22.9■■□□□ 1.26
CCM2-214ENST00000481194 JAKMIP1Q96N16 626 aaKnown RBP22.9■■□□□ 1.26
CCM2-214ENST00000481194 LDHCP07864 332 aa22.9■■□□□ 1.26
CCM2-214ENST00000481194 DZIP1Q86YF9 867 aaKnown RBP22.9■■□□□ 1.26
CCM2-214ENST00000481194 CCDC69A6NI79 296 aa22.89■■□□□ 1.26
CCM2-214ENST00000481194 NBPF14Q5TI25 921 aa22.89■■□□□ 1.26
CCM2-214ENST00000481194 RRP12Q5JTH9 1297 aaKnown RBP22.89■■□□□ 1.26
CCM2-214ENST00000481194 DNAJC10Q8IXB1 793 aa22.89■■□□□ 1.26
CCM2-214ENST00000481194 TMOD2Q9NZR1 351 aa22.89■■□□□ 1.26
CCM2-214ENST00000481194 HOOK1Q9UJC3 728 aaKnown RBP22.89■■□□□ 1.25
CCM2-214ENST00000481194 ANKRD2Q9GZV1 360 aa22.89■■□□□ 1.25
CCM2-214ENST00000481194 ZGPATQ8N5A5 531 aaKnown RBP22.89■■□□□ 1.25
CCM2-214ENST00000481194 CIZ1Q9ULV3 898 aaPredicted RBP22.88■■□□□ 1.25
CCM2-214ENST00000481194 GZF1Q9H116 711 aaPredicted RBP22.88■■□□□ 1.25
CCM2-214ENST00000481194 BICC1Q9H694 974 aaKnown RBP22.88■■□□□ 1.25
CCM2-214ENST00000481194 C3P01024 1663 aa22.88■■□□□ 1.25
CCM2-214ENST00000481194 TFCP2L1Q9NZI6 479 aa22.88■■□□□ 1.25
CCM2-214ENST00000481194 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
CCM2-214ENST00000481194 DRC7Q8IY82 874 aa22.88■■□□□ 1.25
CCM2-214ENST00000481194 AOX1Q06278 1338 aa22.87■■□□□ 1.25
CCM2-214ENST00000481194 SH3TC1Q8TE82 1336 aa22.87■■□□□ 1.25
CCM2-214ENST00000481194 PARP3Q9Y6F1 533 aa22.87■■□□□ 1.25
CCM2-214ENST00000481194 GSTO1P78417 241 aa22.87■■□□□ 1.25
CCM2-214ENST00000481194 HMG20BQ9P0W2 317 aa22.87■■□□□ 1.25
CCM2-214ENST00000481194 VPS53Q5VIR6 699 aa22.86■■□□□ 1.25
CCM2-214ENST00000481194 TBC1D9Q6ZT07 1266 aa22.86■■□□□ 1.25
CCM2-214ENST00000481194 TRIM22Q8IYM9 498 aa22.86■■□□□ 1.25
CCM2-214ENST00000481194 UBAC1Q9BSL1 405 aa22.86■■□□□ 1.25
CCM2-214ENST00000481194 PDE8AO60658 829 aa22.86■■□□□ 1.25
CCM2-214ENST00000481194 JARID2Q92833 1246 aaPredicted RBP22.86■■□□□ 1.25
CCM2-214ENST00000481194 RNF41Q9H4P4 317 aaPredicted RBP22.86■■□□□ 1.25
CCM2-214ENST00000481194 RBM5P52756 815 aaKnown RBP eCLIP22.86■■□□□ 1.25
CCM2-214ENST00000481194 GCKRQ14397 625 aa22.85■■□□□ 1.25
CCM2-214ENST00000481194 A1BGP04217 495 aa22.85■■□□□ 1.25
CCM2-214ENST00000481194 LRRC7Q96NW7 1537 aa22.85■■□□□ 1.25
CCM2-214ENST00000481194 GOLIM4O00461 696 aa22.84■■□□□ 1.25
CCM2-214ENST00000481194 NAPBQ9H115 298 aa22.84■■□□□ 1.25
CCM2-214ENST00000481194 STK32BQ9NY57 414 aa22.84■■□□□ 1.25
CCM2-214ENST00000481194 JCADQ9P266 1359 aa22.84■■□□□ 1.25
CCM2-214ENST00000481194 CRB1P82279 1406 aa22.83■■□□□ 1.25
CCM2-214ENST00000481194 WDR33Q9C0J8 1336 aaKnown RBP22.83■■□□□ 1.24
CCM2-214ENST00000481194 CCDC47Q96A33 483 aaKnown RBP22.83■■□□□ 1.24
CCM2-214ENST00000481194 ZNF396Q96N95 335 aaPredicted RBP22.83■■□□□ 1.24
CCM2-214ENST00000481194 C6orf229H3BNL8 230 aa22.83■■□□□ 1.24
CCM2-214ENST00000481194 SH2B1Q9NRF2 756 aaPredicted RBP22.83■■□□□ 1.24
CCM2-214ENST00000481194 PRPF40BQ6NWY9 871 aaKnown RBP22.82■■□□□ 1.24
CCM2-214ENST00000481194 USP5P45974 858 aa22.82■■□□□ 1.24
CCM2-214ENST00000481194 TCIRG1Q13488 830 aa22.82■■□□□ 1.24
CCM2-214ENST00000481194 FLAD1Q8NFF5 587 aa22.82■■□□□ 1.24
CCM2-214ENST00000481194 CASTP20810 708 aaKnown RBP22.82■■□□□ 1.24
CCM2-214ENST00000481194 WASF1Q92558 559 aa22.82■■□□□ 1.24
CCM2-214ENST00000481194 RBM17Q96I25 401 aaKnown RBP22.82■■□□□ 1.24
CCM2-214ENST00000481194 VSIG10Q8N0Z9 540 aa22.81■■□□□ 1.24
CCM2-214ENST00000481194 KCNQ3O43525 872 aa22.81■■□□□ 1.24
CCM2-214ENST00000481194 SDSP20132 328 aa22.81■■□□□ 1.24
CCM2-214ENST00000481194 BAG3O95817 575 aa22.81■■□□□ 1.24
CCM2-214ENST00000481194 ZNF804AQ7Z570 1209 aa22.81■■□□□ 1.24
CCM2-214ENST00000481194 QTRT2Q9H974 415 aaKnown RBP22.81■■□□□ 1.24
CCM2-214ENST00000481194 BICD2Q8TD16 824 aa22.81■■□□□ 1.24
CCM2-214ENST00000481194 NEURL1BA8MQ27 555 aa22.8■■□□□ 1.24
CCM2-214ENST00000481194 EYA2O00167 538 aa22.8■■□□□ 1.24
CCM2-214ENST00000481194 CNBD1Q8NA66 436 aa22.8■■□□□ 1.24
CCM2-214ENST00000481194 RAD50Q92878 1312 aa22.8■■□□□ 1.24
CCM2-214ENST00000481194 CCDC73Q6ZRK6 1079 aa22.8■■□□□ 1.24
CCM2-214ENST00000481194 FAM196AQ6ZSG2 479 aa22.79■■□□□ 1.24
CCM2-214ENST00000481194 KIF20BQ96Q89 1820 aa22.79■■□□□ 1.24
CCM2-214ENST00000481194 ZNF213O14771 459 aa22.79■■□□□ 1.24
CCM2-214ENST00000481194 ZNF622Q969S3 477 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCM2-214ENST00000481194 PA2G4Q9UQ80 394 aaKnown RBP22.79■■□□□ 1.24
CCM2-214ENST00000481194 HEG1Q9ULI3 1381 aa22.79■■□□□ 1.24
CCM2-214ENST00000481194 SPATA31A6Q5VVP1 1343 aa22.78■■□□□ 1.24
CCM2-214ENST00000481194 OVOS2A0A0G2JMS6 1433 aa22.78■■□□□ 1.24
CCM2-214ENST00000481194 SIGLEC1Q9BZZ2 1709 aa22.78■■□□□ 1.24
CCM2-214ENST00000481194 TULP1O00294 542 aaPredicted RBP22.78■■□□□ 1.24
CCM2-214ENST00000481194 DNTTIP2Q5QJE6 756 aaKnown RBP22.78■■□□□ 1.24
CCM2-214ENST00000481194 CERKQ8TCT0 537 aa22.78■■□□□ 1.24
CCM2-214ENST00000481194 TCEAL9Q9UHQ7 104 aa22.78■■□□□ 1.24
CCM2-214ENST00000481194 POLD1P28340 1107 aa22.77■■□□□ 1.24
CCM2-214ENST00000481194 IL6STP40189 918 aaPredicted RBP22.77■■□□□ 1.24
CCM2-214ENST00000481194 KDM2BQ8NHM5 1336 aa22.77■■□□□ 1.24
CCM2-214ENST00000481194 MBD3O95983 291 aa22.77■■□□□ 1.24
CCM2-214ENST00000481194 ANAPC15P60006 121 aa22.77■■□□□ 1.24
CCM2-214ENST00000481194 TFCP2Q12800 502 aa22.77■■□□□ 1.23
CCM2-214ENST00000481194 LOC102724428A0A0B4J2F2 783 aa22.76■■□□□ 1.23
CCM2-214ENST00000481194 POLR3DP05423 398 aaPredicted RBP22.76■■□□□ 1.23
CCM2-214ENST00000481194 MSNP26038 577 aaKnown RBP22.76■■□□□ 1.23
CCM2-214ENST00000481194 SIK1P57059 783 aa22.76■■□□□ 1.23
CCM2-214ENST00000481194 SUCLG2Q96I99 432 aa22.76■■□□□ 1.23
CCM2-214ENST00000481194 AXIN2Q9Y2T1 843 aa22.76■■□□□ 1.23
CCM2-214ENST00000481194 USP16Q9Y5T5 823 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms