RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 MUM1L1Q5H9M0 696 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 SLF2Q8IX21 1173 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 KRT222Q8N1A0 295 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 RDH13Q8NBN7 331 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 TSC1Q92574 1164 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 SPATA32Q96LK8 384 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 PANK3Q9H999 370 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 USP25Q9UHP3 1055 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 HDAC5Q9UQL6 1122 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 EID1Q9Y6B2 187 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 DIP2AQ14689 1571 aa8.61□□□□□ -1.03
PKP4-211ENST00000481115 KIAA1210Q9ULL0 1709 aa8.61□□□□□ -1.03
PKP4-211ENST00000481115 REC8O95072 547 aa8.61□□□□□ -1.03
PKP4-211ENST00000481115 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
PKP4-211ENST00000481115 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
PKP4-211ENST00000481115 CTNNA3Q9UI47 895 aa8.61□□□□□ -1.03
PKP4-211ENST00000481115 PAXBP1Q9Y5B6 917 aa8.61□□□□□ -1.03
PKP4-211ENST00000481115 NPHP4O75161 1426 aaPredicted RBP8.61□□□□□ -1.03
PKP4-211ENST00000481115 ADAMTS13Q76LX8 1427 aa8.61□□□□□ -1.03
PKP4-211ENST00000481115 ADGRF5Q8IZF2 1346 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 FAM196BA6NMK8 535 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
PKP4-211ENST00000481115 KIF1CO43896 1103 aaKnown RBP8.6□□□□□ -1.03
PKP4-211ENST00000481115 SMARCA5O60264 1052 aaPredicted RBP8.6□□□□□ -1.03
PKP4-211ENST00000481115 GCGRP47871 477 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 HDAC1Q13547 482 aaPredicted RBP8.6□□□□□ -1.03
PKP4-211ENST00000481115 POTEGQ6S5H5 508 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 SKAP1Q86WV1 359 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 PLEKHM2Q8IWE5 1019 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 ZNF454Q8N9F8 522 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 UBXN4Q92575 508 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 MYCBPQ99417 103 aaPredicted RBP8.6□□□□□ -1.03
PKP4-211ENST00000481115 RBSNQ9H1K0 784 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 LMBRD1Q9NUN5 540 aa8.6□□□□□ -1.03
PKP4-211ENST00000481115 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
PKP4-211ENST00000481115 CHD2O14647 1828 aaKnown RBP8.59□□□□□ -1.03
PKP4-211ENST00000481115 ALKQ9UM73 1620 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 VGLL3A8MV65 326 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 CFAP99D6REC4 459 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 MCCP23508 829 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 SERPINB4P48594 390 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 GRIPAP1Q4V328 841 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 CC2D1BQ5T0F9 858 aaKnown RBP8.59□□□□□ -1.03
PKP4-211ENST00000481115 USP17L2Q6R6M4 530 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 NUDT18Q6ZVK8 323 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 MNS1Q8NEH6 495 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 NCAPGQ9BPX3 1015 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 SLAIN2Q9P270 581 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 PDZRN3Q9UPQ7 1066 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 ANKRD36BQ8N2N9 1353 aa8.59□□□□□ -1.03
PKP4-211ENST00000481115 SMTNL1A8MU46 457 aa8.58□□□□□ -1.04
PKP4-211ENST00000481115 APPP05067 770 aa8.58□□□□□ -1.04
PKP4-211ENST00000481115 NR1H3Q13133 447 aa8.58□□□□□ -1.04
PKP4-211ENST00000481115 WDR43Q15061 677 aaKnown RBP eCLIP8.58□□□□□ -1.04
PKP4-211ENST00000481115 NR6A1Q15406 480 aa8.58□□□□□ -1.04
PKP4-211ENST00000481115 SF3A1Q15459 793 aaKnown RBP8.58□□□□□ -1.04
PKP4-211ENST00000481115 SLC26A8Q96RN1 970 aa8.58□□□□□ -1.04
PKP4-211ENST00000481115 TACO1Q9BSH4 297 aaKnown RBP8.58□□□□□ -1.04
PKP4-211ENST00000481115 FEZ2Q9UHY8 353 aaPredicted RBP8.58□□□□□ -1.04
PKP4-211ENST00000481115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■□□□□ 8.8
PKP4-211ENST00000481115 ASXL1Q8IXJ9 1541 aa8.58□□□□□ -1.04
PKP4-211ENST00000481115 NWD1Q149M9 1564 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L15C9J2P7 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L13C9JLJ4 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L12C9JPN9 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L11C9JVI0 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L21D6R901 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L18D6R9N7 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L22D6RA61 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L17D6RBQ6 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L19D6RCP7 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L20D6RJB6 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 PIK3CDO00329 1044 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 ATP8B1O43520 1251 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 CYP2C19P33261 490 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 USP17L24Q0WX57 530 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 ASTLQ6HA08 431 aaPredicted RBP8.57□□□□□ -1.04
PKP4-211ENST00000481115 TXLNBQ8N3L3 684 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 GOLGA6L1Q8N7Z2 621 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 FAM200AQ8TCP9 573 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 CDCA7Q9BWT1 371 aaPredicted RBP8.57□□□□□ -1.04
PKP4-211ENST00000481115 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 CWC15Q9P013 229 aaKnown RBP8.57□□□□□ -1.04
PKP4-211ENST00000481115 V9GYY5 206 aaPredicted RBP8.57□□□□□ -1.04
PKP4-211ENST00000481115 STRCP1A6NGW2 1772 aa8.57□□□□□ -1.04
PKP4-211ENST00000481115 ADGRB1O14514 1584 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 USP17L5A8MUK1 530 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 TUBB4AP04350 444 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 SKIP12755 728 aa8.56□□□□□ -1.04
PKP4-211ENST00000481115 ATP2B4P23634 1241 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms