RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 FMR1NBQ8N0W7 255 aaPredicted RBP9.5□□□□□ -0.89
RGPD6-209ENST00000480894 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
RGPD6-209ENST00000480894 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
RGPD6-209ENST00000480894 NUDT8Q8WV74 236 aa9.5□□□□□ -0.89
RGPD6-209ENST00000480894 USP21Q9UK80 565 aa9.5□□□□□ -0.89
RGPD6-209ENST00000480894 AFF1P51825 1210 aaKnown RBP9.49□□□□□ -0.89
RGPD6-209ENST00000480894 SUSD3Q96L08 255 aa9.49□□□□□ -0.89
RGPD6-209ENST00000480894 PHACTR1Q9C0D0 580 aa9.49□□□□□ -0.89
RGPD6-209ENST00000480894 HCN4Q9Y3Q4 1203 aa9.49□□□□□ -0.89
RGPD6-209ENST00000480894 TSPAN10Q9H1Z9 355 aaPredicted RBP9.47□□□□□ -0.89
RGPD6-209ENST00000480894 IGFLR1Q9H665 355 aa9.47□□□□□ -0.89
RGPD6-209ENST00000480894 PSAPL1Q6NUJ1 521 aa9.46□□□□□ -0.9
RGPD6-209ENST00000480894 DMRTC2Q8IXT2 367 aaPredicted RBP9.46□□□□□ -0.9
RGPD6-209ENST00000480894 NAGPAQ9UK23 515 aa9.46□□□□□ -0.9
RGPD6-209ENST00000480894 RNF112Q9ULX5 631 aa9.46□□□□□ -0.9
RGPD6-209ENST00000480894 CHMP3Q9Y3E7 222 aa9.46□□□□□ -0.9
RGPD6-209ENST00000480894 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
RGPD6-209ENST00000480894 DEPDC4Q8N2C3 294 aa9.45□□□□□ -0.9
RGPD6-209ENST00000480894 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
RGPD6-209ENST00000480894 ALG2Q9H553 416 aa9.45□□□□□ -0.9
RGPD6-209ENST00000480894 EFCC1Q9HA90 598 aa9.45□□□□□ -0.9
RGPD6-209ENST00000480894 DNAJB12Q9NXW2 375 aaKnown RBP9.45□□□□□ -0.9
RGPD6-209ENST00000480894 MCTP1Q6DN14 999 aa9.44□□□□□ -0.9
RGPD6-209ENST00000480894 KIAA1024Q9UPX6 916 aa9.44□□□□□ -0.9
RGPD6-209ENST00000480894 ZBTB7BO15156 539 aaPredicted RBP9.43□□□□□ -0.9
RGPD6-209ENST00000480894 BTLAQ7Z6A9 289 aa9.43□□□□□ -0.9
RGPD6-209ENST00000480894 TRIM50Q86XT4 487 aa9.43□□□□□ -0.9
RGPD6-209ENST00000480894 WFDC12Q8WWY7 111 aa9.43□□□□□ -0.9
RGPD6-209ENST00000480894 RGS9O75916 674 aaPredicted RBP9.42□□□□□ -0.9
RGPD6-209ENST00000480894 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
RGPD6-209ENST00000480894 MSL1Q68DK7 614 aa9.41□□□□□ -0.9
RGPD6-209ENST00000480894 DTWD1Q8N5C7 304 aa9.41□□□□□ -0.9
RGPD6-209ENST00000480894 GSX2Q9BZM3 304 aa9.41□□□□□ -0.9
RGPD6-209ENST00000480894 NOS3P29474 1203 aa9.4□□□□□ -0.9
RGPD6-209ENST00000480894 IREB2P48200 963 aaKnown RBP9.4□□□□□ -0.9
RGPD6-209ENST00000480894 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
RGPD6-209ENST00000480894 M0R2N6 131 aa9.39□□□□□ -0.91
RGPD6-209ENST00000480894 ATP1A2P50993 1020 aa9.39□□□□□ -0.91
RGPD6-209ENST00000480894 CLDN10P78369 228 aa9.39□□□□□ -0.91
RGPD6-209ENST00000480894 MCM6Q14566 821 aa9.39□□□□□ -0.91
RGPD6-209ENST00000480894 ALDH16A1Q8IZ83 802 aa9.39□□□□□ -0.91
RGPD6-209ENST00000480894 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.39□□□□□ -0.91
RGPD6-209ENST00000480894 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
RGPD6-209ENST00000480894 HIF1AQ16665 826 aa9.38□□□□□ -0.91
RGPD6-209ENST00000480894 MEGF10Q96KG7 1140 aa9.38□□□□□ -0.91
RGPD6-209ENST00000480894 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
RGPD6-209ENST00000480894 C21orf2O43822 256 aa9.37□□□□□ -0.91
RGPD6-209ENST00000480894 NFKB1P19838 968 aa9.37□□□□□ -0.91
RGPD6-209ENST00000480894 CCINQ13939 588 aa9.37□□□□□ -0.91
RGPD6-209ENST00000480894 GRIK5Q16478 980 aa9.37□□□□□ -0.91
RGPD6-209ENST00000480894 PRR23CQ6ZRP0 262 aa9.37□□□□□ -0.91
RGPD6-209ENST00000480894 COG6Q9Y2V7 657 aa9.37□□□□□ -0.91
RGPD6-209ENST00000480894 FAM35AQ86V20 835 aa9.36□□□□□ -0.91
RGPD6-209ENST00000480894 PLEKHM2Q8IWE5 1019 aa9.36□□□□□ -0.91
RGPD6-209ENST00000480894 TSEN2Q8NCE0 465 aaKnown RBP9.36□□□□□ -0.91
RGPD6-209ENST00000480894 LPIN3Q9BQK8 851 aa9.36□□□□□ -0.91
RGPD6-209ENST00000480894 FRRS1LQ9P0K9 344 aa9.36□□□□□ -0.91
RGPD6-209ENST00000480894 COL17A1Q9UMD9 1497 aaPredicted RBP9.35□□□□□ -0.91
RGPD6-209ENST00000480894 IER5Q5VY09 327 aa9.35□□□□□ -0.91
RGPD6-209ENST00000480894 IGF2-ASQ6U949 168 aa9.35□□□□□ -0.91
RGPD6-209ENST00000480894 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
RGPD6-209ENST00000480894 PCMTD2Q9NV79 361 aa9.35□□□□□ -0.91
RGPD6-209ENST00000480894 USP17L3A6NCW0 530 aa9.34□□□□□ -0.91
RGPD6-209ENST00000480894 USP17L4A6NCW7 530 aa9.34□□□□□ -0.91
RGPD6-209ENST00000480894 CPB1P15086 417 aa9.34□□□□□ -0.91
RGPD6-209ENST00000480894 PCSK7Q16549 785 aa9.34□□□□□ -0.91
RGPD6-209ENST00000480894 USP17L2Q6R6M4 530 aa9.34□□□□□ -0.91
RGPD6-209ENST00000480894 USP17L1Q7RTZ2 530 aa9.34□□□□□ -0.91
RGPD6-209ENST00000480894 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
RGPD6-209ENST00000480894 C2orf49Q9BVC5 232 aaPredicted RBP9.34□□□□□ -0.91
RGPD6-209ENST00000480894 PERM1Q5SV97 790 aa9.33□□□□□ -0.92
RGPD6-209ENST00000480894 WFDC8Q8IUA0 241 aa9.33□□□□□ -0.92
RGPD6-209ENST00000480894 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
RGPD6-209ENST00000480894 ARXQ96QS3 562 aa9.33□□□□□ -0.92
RGPD6-209ENST00000480894 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
RGPD6-209ENST00000480894 PAX4O43316 350 aa9.32□□□□□ -0.92
RGPD6-209ENST00000480894 PLAURQ03405 335 aa9.32□□□□□ -0.92
RGPD6-209ENST00000480894 SIX5Q8N196 739 aa9.32□□□□□ -0.92
RGPD6-209ENST00000480894 NGLY1Q96IV0 654 aa9.32□□□□□ -0.92
RGPD6-209ENST00000480894 TGFBR3LH3BV60 316 aa9.31□□□□□ -0.92
RGPD6-209ENST00000480894 DEAF1O75398 565 aaPredicted RBP9.31□□□□□ -0.92
RGPD6-209ENST00000480894 DKK1O94907 266 aa9.31□□□□□ -0.92
RGPD6-209ENST00000480894 MAP3K6O95382 1288 aa9.31□□□□□ -0.92
RGPD6-209ENST00000480894 FSTP19883 344 aa9.31□□□□□ -0.92
RGPD6-209ENST00000480894 GRNP28799 593 aaKnown RBP9.31□□□□□ -0.92
RGPD6-209ENST00000480894 SLC51AQ86UW1 340 aa9.31□□□□□ -0.92
RGPD6-209ENST00000480894 TTC9Q92623 222 aa9.31□□□□□ -0.92
RGPD6-209ENST00000480894 DMGDHQ9UI17 866 aaKnown RBP9.31□□□□□ -0.92
RGPD6-209ENST00000480894 ATAD2Q6PL18 1390 aa9.31□□□□□ -0.92
RGPD6-209ENST00000480894 ZBTB42B2RXF5 422 aa9.3□□□□□ -0.92
RGPD6-209ENST00000480894 ELMSAN1Q6PJG2 1045 aa9.3□□□□□ -0.92
RGPD6-209ENST00000480894 DZIP1LQ8IYY4 767 aaKnown RBP9.3□□□□□ -0.92
RGPD6-209ENST00000480894 TRPM4Q8TD43 1214 aa9.3□□□□□ -0.92
RGPD6-209ENST00000480894 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
RGPD6-209ENST00000480894 SSTR4P31391 388 aa9.29□□□□□ -0.92
RGPD6-209ENST00000480894 CD97P48960 835 aa9.29□□□□□ -0.92
RGPD6-209ENST00000480894 RTN1Q16799 776 aa9.29□□□□□ -0.92
RGPD6-209ENST00000480894 DHX32Q7L7V1 743 aaKnown RBP9.29□□□□□ -0.92
RGPD6-209ENST00000480894 GAS2L2Q8NHY3 880 aa9.29□□□□□ -0.92
RGPD6-209ENST00000480894 SCG3Q8WXD2 468 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms