RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 ANKRD44Q8N8A2 993 aa16.53■□□□□ 0.24
COL4A2-206ENST00000480609 ZBTB38Q8NAP3 1195 aaPredicted RBP16.53■□□□□ 0.24
COL4A2-206ENST00000480609 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
COL4A2-206ENST00000480609 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
COL4A2-206ENST00000480609 COL24A1Q17RW2 1714 aa16.52■□□□□ 0.24
COL4A2-206ENST00000480609 PNPLA7Q6ZV29 1317 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 GYS1P13807 737 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
COL4A2-206ENST00000480609 USPL1Q5W0Q7 1092 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 CEP85Q6P2H3 762 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 KAZALD1Q96I82 304 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 TFCP2L1Q9NZI6 479 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 AFDNP55196 1824 aaKnown RBP16.51■□□□□ 0.23
COL4A2-206ENST00000480609 TUBGCP6Q96RT7 1819 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
COL4A2-206ENST00000480609 KDM2BQ8NHM5 1336 aa16.5■□□□□ 0.23
COL4A2-206ENST00000480609 ATP8B2P98198 1209 aa16.5■□□□□ 0.23
COL4A2-206ENST00000480609 PPP1R42Q7Z4L9 355 aa16.5■□□□□ 0.23
COL4A2-206ENST00000480609 ANO8Q9HCE9 1232 aaPredicted RBP16.5■□□□□ 0.23
COL4A2-206ENST00000480609 NTSR2O95665 410 aa16.49■□□□□ 0.23
COL4A2-206ENST00000480609 TM4SF1P30408 202 aa16.49■□□□□ 0.23
COL4A2-206ENST00000480609 SLC10A5Q5PT55 438 aa16.49■□□□□ 0.23
COL4A2-206ENST00000480609 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
COL4A2-206ENST00000480609 SSH3Q8TE77 659 aa16.49■□□□□ 0.23
COL4A2-206ENST00000480609 RWDD1Q9H446 243 aaPredicted RBP16.49■□□□□ 0.23
COL4A2-206ENST00000480609 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
COL4A2-206ENST00000480609 POLA2Q14181 598 aa16.48■□□□□ 0.23
COL4A2-206ENST00000480609 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
COL4A2-206ENST00000480609 COL23A1Q86Y22 540 aaPredicted RBP16.48■□□□□ 0.23
COL4A2-206ENST00000480609 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
COL4A2-206ENST00000480609 CCDC136Q96JN2 1154 aa16.48■□□□□ 0.23
COL4A2-206ENST00000480609 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
COL4A2-206ENST00000480609 NYXQ9GZU5 481 aa16.48■□□□□ 0.23
COL4A2-206ENST00000480609 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
COL4A2-206ENST00000480609 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
COL4A2-206ENST00000480609 CARMIL3Q8ND23 1372 aa16.48■□□□□ 0.23
COL4A2-206ENST00000480609 SH3TC1Q8TE82 1336 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 HMMRO75330 724 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 CSF1RP07333 972 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 SUSD4Q5VX71 490 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 TBC1D9BQ66K14 1250 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 SMC5Q8IY18 1101 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 SLC16A10Q8TF71 515 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 SUCLG2Q96I99 432 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 ARXQ96QS3 562 aa16.47■□□□□ 0.23
COL4A2-206ENST00000480609 PHF14O94880 888 aa16.46■□□□□ 0.23
COL4A2-206ENST00000480609 SETDB2Q96T68 719 aa16.46■□□□□ 0.23
COL4A2-206ENST00000480609 GPTP24298 496 aa16.45■□□□□ 0.22
COL4A2-206ENST00000480609 FOXO4P98177 505 aa16.45■□□□□ 0.22
COL4A2-206ENST00000480609 NFIXQ14938 502 aa16.45■□□□□ 0.22
COL4A2-206ENST00000480609 GCC1Q96CN9 775 aa16.45■□□□□ 0.22
COL4A2-206ENST00000480609 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
COL4A2-206ENST00000480609 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
COL4A2-206ENST00000480609 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
COL4A2-206ENST00000480609 LAMB2P55268 1798 aa16.44■□□□□ 0.22
COL4A2-206ENST00000480609 PDE8AO60658 829 aa16.44■□□□□ 0.22
COL4A2-206ENST00000480609 TPTE2Q6XPS3 522 aa16.44■□□□□ 0.22
COL4A2-206ENST00000480609 SMIM5Q71RC9 77 aa16.44■□□□□ 0.22
COL4A2-206ENST00000480609 BICC1Q9H694 974 aaKnown RBP16.44■□□□□ 0.22
COL4A2-206ENST00000480609 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
COL4A2-206ENST00000480609 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
COL4A2-206ENST00000480609 NOP58Q9Y2X3 529 aaKnown RBP16.44■□□□□ 0.22
COL4A2-206ENST00000480609 NRXN2Q9P2S2 1712 aa16.44■□□□□ 0.22
COL4A2-206ENST00000480609 IGHDP01880 384 aa16.43■□□□□ 0.22
COL4A2-206ENST00000480609 EPHA10Q5JZY3 1008 aa16.43■□□□□ 0.22
COL4A2-206ENST00000480609 B4GALNT3Q6L9W6 998 aa16.43■□□□□ 0.22
COL4A2-206ENST00000480609 FAM89AQ96GI7 184 aa16.43■□□□□ 0.22
COL4A2-206ENST00000480609 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
COL4A2-206ENST00000480609 IRS4O14654 1257 aaPredicted RBP16.42■□□□□ 0.22
COL4A2-206ENST00000480609 SF3B3Q15393 1217 aaKnown RBP16.42■□□□□ 0.22
COL4A2-206ENST00000480609 COPRSQ9NQ92 184 aa16.42■□□□□ 0.22
COL4A2-206ENST00000480609 KLRG2A4D1S0 409 aaPredicted RBP16.41■□□□□ 0.22
COL4A2-206ENST00000480609 POLRMTO00411 1230 aaKnown RBP16.41■□□□□ 0.22
COL4A2-206ENST00000480609 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
COL4A2-206ENST00000480609 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
COL4A2-206ENST00000480609 CTSWP56202 376 aa16.4■□□□□ 0.22
COL4A2-206ENST00000480609 HSP90AB4PQ58FF6 505 aa16.4■□□□□ 0.22
COL4A2-206ENST00000480609 NBPF5PQ86XG9 351 aaPredicted RBP16.4■□□□□ 0.22
COL4A2-206ENST00000480609 TTLL11Q8NHH1 800 aa16.4■□□□□ 0.22
COL4A2-206ENST00000480609 MYH3P11055 1940 aa16.4■□□□□ 0.22
COL4A2-206ENST00000480609 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
COL4A2-206ENST00000480609 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
COL4A2-206ENST00000480609 ILDR2Q71H61 639 aa16.39■□□□□ 0.21
COL4A2-206ENST00000480609 RAB11FIP3O75154 756 aa16.38■□□□□ 0.21
COL4A2-206ENST00000480609 SERPINB2P05120 415 aa16.38■□□□□ 0.21
COL4A2-206ENST00000480609 PTPN12Q05209 780 aaKnown RBP16.38■□□□□ 0.21
COL4A2-206ENST00000480609 DDR1Q08345 913 aa16.38■□□□□ 0.21
COL4A2-206ENST00000480609 CASZ1Q86V15 1759 aa16.37■□□□□ 0.21
COL4A2-206ENST00000480609 PRR5LQ6MZQ0 368 aa16.37■□□□□ 0.21
COL4A2-206ENST00000480609 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
COL4A2-206ENST00000480609 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
COL4A2-206ENST00000480609 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
COL4A2-206ENST00000480609 CIAO1O76071 339 aa16.36■□□□□ 0.21
COL4A2-206ENST00000480609 NUCB1Q02818 461 aa16.36■□□□□ 0.21
COL4A2-206ENST00000480609 CRY2Q49AN0 593 aa16.36■□□□□ 0.21
COL4A2-206ENST00000480609 ERFEQ4G0M1 354 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms