RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 ZPR1O75312 459 aa15.74■□□□□ 0.11
SIK3-209ENST00000480222 TRAPPC3LQ5T215 181 aa15.74■□□□□ 0.11
SIK3-209ENST00000480222 NLRP10Q86W26 655 aa15.74■□□□□ 0.11
SIK3-209ENST00000480222 ZNF34Q8IZ26 560 aa15.74■□□□□ 0.11
SIK3-209ENST00000480222 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
SIK3-209ENST00000480222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
SIK3-209ENST00000480222 RFC4P35249 363 aa15.73■□□□□ 0.11
SIK3-209ENST00000480222 MTX1Q13505 466 aa15.73■□□□□ 0.11
SIK3-209ENST00000480222 UBE3BQ7Z3V4 1068 aa15.73■□□□□ 0.11
SIK3-209ENST00000480222 FLAD1Q8NFF5 587 aa15.73■□□□□ 0.11
SIK3-209ENST00000480222 MYH3P11055 1940 aa15.72■□□□□ 0.11
SIK3-209ENST00000480222 UBN2Q6ZU65 1347 aa15.72■□□□□ 0.11
SIK3-209ENST00000480222 CDHR2Q9BYE9 1310 aa15.72■□□□□ 0.11
SIK3-209ENST00000480222 PSDA5PKW4 1024 aaPredicted RBP15.72■□□□□ 0.11
SIK3-209ENST00000480222 H7C1W4 665 aa15.72■□□□□ 0.11
SIK3-209ENST00000480222 PHF14O94880 888 aa15.72■□□□□ 0.11
SIK3-209ENST00000480222 PCCAP05165 728 aaPredicted RBP15.72■□□□□ 0.11
SIK3-209ENST00000480222 ZBTB38Q8NAP3 1195 aaPredicted RBP15.72■□□□□ 0.11
SIK3-209ENST00000480222 ARHGEF1Q92888 912 aaKnown RBP15.72■□□□□ 0.11
SIK3-209ENST00000480222 CASP7P55210 303 aa15.71■□□□□ 0.11
SIK3-209ENST00000480222 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
SIK3-209ENST00000480222 EZH2Q15910 746 aaKnown RBP15.71■□□□□ 0.11
SIK3-209ENST00000480222 ZNF827Q17R98 1081 aa15.71■□□□□ 0.11
SIK3-209ENST00000480222 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.11
SIK3-209ENST00000480222 AMIGO3Q86WK7 504 aa15.71■□□□□ 0.11
SIK3-209ENST00000480222 IGHDP01880 384 aa15.7■□□□□ 0.1
SIK3-209ENST00000480222 HSP90B1P14625 803 aaKnown RBP15.7■□□□□ 0.1
SIK3-209ENST00000480222 GPTP24298 496 aa15.7■□□□□ 0.1
SIK3-209ENST00000480222 SIRT2Q8IXJ6 389 aa15.7■□□□□ 0.1
SIK3-209ENST00000480222 GCC1Q96CN9 775 aa15.7■□□□□ 0.1
SIK3-209ENST00000480222 SUCLG2Q96I99 432 aa15.7■□□□□ 0.1
SIK3-209ENST00000480222 TFCP2L1Q9NZI6 479 aa15.7■□□□□ 0.1
SIK3-209ENST00000480222 NIP7Q9Y221 180 aaKnown RBP eCLIP15.7■□□□□ 0.1
SIK3-209ENST00000480222 DDX60Q8IY21 1712 aaKnown RBP15.69■□□□□ 0.1
SIK3-209ENST00000480222 ATP8B2P98198 1209 aa15.69■□□□□ 0.1
SIK3-209ENST00000480222 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
SIK3-209ENST00000480222 PPP1R42Q7Z4L9 355 aa15.69■□□□□ 0.1
SIK3-209ENST00000480222 SMC5Q8IY18 1101 aa15.69■□□□□ 0.1
SIK3-209ENST00000480222 PLA2G12BQ9BX93 195 aa15.69■□□□□ 0.1
SIK3-209ENST00000480222 BCL2L12Q9HB09 334 aa15.69■□□□□ 0.1
SIK3-209ENST00000480222 SRP68Q9UHB9 627 aaKnown RBP15.69■□□□□ 0.1
SIK3-209ENST00000480222 CARMIL3Q8ND23 1372 aa15.69■□□□□ 0.1
SIK3-209ENST00000480222 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
SIK3-209ENST00000480222 SSH3Q8TE77 659 aa15.68■□□□□ 0.1
SIK3-209ENST00000480222 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
SIK3-209ENST00000480222 UTP14AQ9BVJ6 771 aaKnown RBP15.68■□□□□ 0.1
SIK3-209ENST00000480222 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
SIK3-209ENST00000480222 STK32BQ9NY57 414 aa15.68■□□□□ 0.1
SIK3-209ENST00000480222 SRGAP3O43295 1099 aa15.67■□□□□ 0.1
SIK3-209ENST00000480222 NTSR2O95665 410 aa15.67■□□□□ 0.1
SIK3-209ENST00000480222 POLA2Q14181 598 aa15.67■□□□□ 0.1
SIK3-209ENST00000480222 NYXQ9GZU5 481 aa15.67■□□□□ 0.1
SIK3-209ENST00000480222 TRMT112Q9UI30 125 aaKnown RBP15.67■□□□□ 0.1
SIK3-209ENST00000480222 RIC1Q4ADV7 1423 aa15.67■□□□□ 0.1
SIK3-209ENST00000480222 PNMA6EA0A0J9YXQ4 647 aa15.66■□□□□ 0.1
SIK3-209ENST00000480222 SLC15A2Q16348 729 aa15.66■□□□□ 0.1
SIK3-209ENST00000480222 TBC1D9BQ66K14 1250 aa15.66■□□□□ 0.1
SIK3-209ENST00000480222 SETDB2Q96T68 719 aa15.66■□□□□ 0.1
SIK3-209ENST00000480222 DCTPP1Q9H773 170 aa15.66■□□□□ 0.1
SIK3-209ENST00000480222 ANO8Q9HCE9 1232 aaPredicted RBP15.66■□□□□ 0.1
SIK3-209ENST00000480222 CASZ1Q86V15 1759 aa15.66■□□□□ 0.1
SIK3-209ENST00000480222 PNPLA7Q6ZV29 1317 aa15.66■□□□□ 0.1
SIK3-209ENST00000480222 GYS1P13807 737 aa15.65■□□□□ 0.1
SIK3-209ENST00000480222 SUSD4Q5VX71 490 aa15.65■□□□□ 0.1
SIK3-209ENST00000480222 SMIM5Q71RC9 77 aa15.65■□□□□ 0.1
SIK3-209ENST00000480222 FAM89AQ96GI7 184 aa15.65■□□□□ 0.1
SIK3-209ENST00000480222 IRS4O14654 1257 aaPredicted RBP15.64■□□□□ 0.09
SIK3-209ENST00000480222 FOXO4P98177 505 aa15.64■□□□□ 0.09
SIK3-209ENST00000480222 R3HDM1Q15032 1099 aaKnown RBP15.64■□□□□ 0.09
SIK3-209ENST00000480222 EPHA10Q5JZY3 1008 aa15.64■□□□□ 0.09
SIK3-209ENST00000480222 NRXN2Q9P2S2 1712 aa15.64■□□□□ 0.09
SIK3-209ENST00000480222 PDE8AO60658 829 aa15.63■□□□□ 0.09
SIK3-209ENST00000480222 CTSWP56202 376 aa15.63■□□□□ 0.09
SIK3-209ENST00000480222 HSP90AB4PQ58FF6 505 aa15.63■□□□□ 0.09
SIK3-209ENST00000480222 COL23A1Q86Y22 540 aaPredicted RBP15.63■□□□□ 0.09
SIK3-209ENST00000480222 RTL9Q8NET4 1388 aa15.62■□□□□ 0.09
SIK3-209ENST00000480222 NFIXQ14938 502 aa15.62■□□□□ 0.09
SIK3-209ENST00000480222 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
SIK3-209ENST00000480222 LMBR1LQ6UX01 489 aa15.62■□□□□ 0.09
SIK3-209ENST00000480222 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
SIK3-209ENST00000480222 NBPF5PQ86XG9 351 aaPredicted RBP15.62■□□□□ 0.09
SIK3-209ENST00000480222 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
SIK3-209ENST00000480222 NLGN1Q8N2Q7 840 aa15.62■□□□□ 0.09
SIK3-209ENST00000480222 JARID2Q92833 1246 aaPredicted RBP15.62■□□□□ 0.09
SIK3-209ENST00000480222 NOP58Q9Y2X3 529 aaKnown RBP15.62■□□□□ 0.09
SIK3-209ENST00000480222 RAB11FIP3O75154 756 aa15.61■□□□□ 0.09
SIK3-209ENST00000480222 CSF1RP07333 972 aa15.61■□□□□ 0.09
SIK3-209ENST00000480222 NUCB1Q02818 461 aa15.61■□□□□ 0.09
SIK3-209ENST00000480222 TPTE2Q6XPS3 522 aa15.61■□□□□ 0.09
SIK3-209ENST00000480222 COPRSQ9NQ92 184 aa15.61■□□□□ 0.09
SIK3-209ENST00000480222 ABCC12Q96J65 1359 aa15.61■□□□□ 0.09
SIK3-209ENST00000480222 TNRC6CQ9HCJ0 1690 aaKnown RBP15.6■□□□□ 0.09
SIK3-209ENST00000480222 ERC1Q8IUD2 1116 aa15.6■□□□□ 0.09
SIK3-209ENST00000480222 ZBTB47Q9UFB7 747 aaPredicted RBP15.6■□□□□ 0.09
SIK3-209ENST00000480222 CHMP3Q9Y3E7 222 aa15.6■□□□□ 0.09
SIK3-209ENST00000480222 FAM177BA6PVY3 158 aa15.59■□□□□ 0.09
SIK3-209ENST00000480222 MSH5O43196 834 aa15.59■□□□□ 0.09
SIK3-209ENST00000480222 GTF2E1P29083 439 aaPredicted RBP15.59■□□□□ 0.09
SIK3-209ENST00000480222 TM4SF1P30408 202 aa15.59■□□□□ 0.09
SIK3-209ENST00000480222 RFX5P48382 616 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms