RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 GNAI2P04899 355 aa21.17■□□□□ 0.98
SCAMP3-207ENST00000480219 NBPF7P0C2Y1 421 aaPredicted RBP21.17■□□□□ 0.98
SCAMP3-207ENST00000480219 ARXQ96QS3 562 aa21.17■□□□□ 0.98
SCAMP3-207ENST00000480219 STK32BQ9NY57 414 aa21.17■□□□□ 0.98
SCAMP3-207ENST00000480219 HDAC5Q9UQL6 1122 aa21.17■□□□□ 0.98
SCAMP3-207ENST00000480219 PCDHB15Q9Y5E8 787 aa21.17■□□□□ 0.98
SCAMP3-207ENST00000480219 PHF14O94880 888 aa21.16■□□□□ 0.98
SCAMP3-207ENST00000480219 UBTFL1P0CB47 393 aaPredicted RBP21.16■□□□□ 0.98
SCAMP3-207ENST00000480219 GYS1P13807 737 aa21.16■□□□□ 0.98
SCAMP3-207ENST00000480219 C9orf78Q9NZ63 289 aaPredicted RBP21.16■□□□□ 0.98
SCAMP3-207ENST00000480219 PCCAP05165 728 aaPredicted RBP21.15■□□□□ 0.98
SCAMP3-207ENST00000480219 COL23A1Q86Y22 540 aaPredicted RBP21.15■□□□□ 0.98
SCAMP3-207ENST00000480219 ZBTB38Q8NAP3 1195 aaPredicted RBP21.15■□□□□ 0.98
SCAMP3-207ENST00000480219 CDHR2Q9BYE9 1310 aa21.14■□□□□ 0.97
SCAMP3-207ENST00000480219 RPAP2Q8IXW5 612 aaPredicted RBP21.14■□□□□ 0.97
SCAMP3-207ENST00000480219 GPTP24298 496 aa21.13■□□□□ 0.97
SCAMP3-207ENST00000480219 MTX1Q13505 466 aa21.13■□□□□ 0.97
SCAMP3-207ENST00000480219 TBC1D9BQ66K14 1250 aa21.13■□□□□ 0.97
SCAMP3-207ENST00000480219 ILDR2Q71H61 639 aa21.13■□□□□ 0.97
SCAMP3-207ENST00000480219 ANKRD44Q8N8A2 993 aa21.13■□□□□ 0.97
SCAMP3-207ENST00000480219 KAZALD1Q96I82 304 aa21.13■□□□□ 0.97
SCAMP3-207ENST00000480219 PLA2G12BQ9BX93 195 aa21.13■□□□□ 0.97
SCAMP3-207ENST00000480219 NIP7Q9Y221 180 aaKnown RBP eCLIP21.13■□□□□ 0.97
SCAMP3-207ENST00000480219 NTSR2O95665 410 aa21.12■□□□□ 0.97
SCAMP3-207ENST00000480219 HDAC1Q13547 482 aaPredicted RBP21.12■□□□□ 0.97
SCAMP3-207ENST00000480219 CEP85Q6P2H3 762 aa21.12■□□□□ 0.97
SCAMP3-207ENST00000480219 LAMB2P55268 1798 aa21.11■□□□□ 0.97
SCAMP3-207ENST00000480219 TM4SF1P30408 202 aa21.11■□□□□ 0.97
SCAMP3-207ENST00000480219 RABL6Q3YEC7 729 aaPredicted RBP21.11■□□□□ 0.97
SCAMP3-207ENST00000480219 SUSD4Q5VX71 490 aa21.11■□□□□ 0.97
SCAMP3-207ENST00000480219 PPP1R42Q7Z4L9 355 aa21.11■□□□□ 0.97
SCAMP3-207ENST00000480219 SIRT2Q8IXJ6 389 aa21.11■□□□□ 0.97
SCAMP3-207ENST00000480219 SUCLG2Q96I99 432 aa21.11■□□□□ 0.97
SCAMP3-207ENST00000480219 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
SCAMP3-207ENST00000480219 UBE3BQ7Z3V4 1068 aa21.1■□□□□ 0.97
SCAMP3-207ENST00000480219 C1orf115Q9H7X2 142 aa21.1■□□□□ 0.97
SCAMP3-207ENST00000480219 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
SCAMP3-207ENST00000480219 NFIXQ14938 502 aa21.09■□□□□ 0.97
SCAMP3-207ENST00000480219 NLGN1Q8N2Q7 840 aa21.09■□□□□ 0.97
SCAMP3-207ENST00000480219 SETDB2Q96T68 719 aa21.09■□□□□ 0.97
SCAMP3-207ENST00000480219 UTP14AQ9BVJ6 771 aaKnown RBP21.09■□□□□ 0.97
SCAMP3-207ENST00000480219 RIC1Q4ADV7 1423 aa21.09■□□□□ 0.97
SCAMP3-207ENST00000480219 KDM2BQ8NHM5 1336 aa21.08■□□□□ 0.97
SCAMP3-207ENST00000480219 ATP8B2P98198 1209 aa21.08■□□□□ 0.97
SCAMP3-207ENST00000480219 CCDC136Q96JN2 1154 aa21.08■□□□□ 0.97
SCAMP3-207ENST00000480219 NYXQ9GZU5 481 aa21.08■□□□□ 0.97
SCAMP3-207ENST00000480219 NRXN2Q9P2S2 1712 aa21.08■□□□□ 0.97
SCAMP3-207ENST00000480219 TRMT112Q9UI30 125 aaKnown RBP21.08■□□□□ 0.97
SCAMP3-207ENST00000480219 SH3TC1Q8TE82 1336 aa21.07■□□□□ 0.96
SCAMP3-207ENST00000480219 FOXO4P98177 505 aa21.07■□□□□ 0.96
SCAMP3-207ENST00000480219 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
SCAMP3-207ENST00000480219 SSH3Q8TE77 659 aa21.07■□□□□ 0.96
SCAMP3-207ENST00000480219 FAM89AQ96GI7 184 aa21.07■□□□□ 0.96
SCAMP3-207ENST00000480219 DDX60Q8IY21 1712 aaKnown RBP21.07■□□□□ 0.96
SCAMP3-207ENST00000480219 POLA2Q14181 598 aa21.06■□□□□ 0.96
SCAMP3-207ENST00000480219 EPHA10Q5JZY3 1008 aa21.06■□□□□ 0.96
SCAMP3-207ENST00000480219 SLC16A10Q8TF71 515 aa21.06■□□□□ 0.96
SCAMP3-207ENST00000480219 BICC1Q9H694 974 aaKnown RBP21.06■□□□□ 0.96
SCAMP3-207ENST00000480219 CASZ1Q86V15 1759 aa21.05■□□□□ 0.96
SCAMP3-207ENST00000480219 CSF1RP07333 972 aa21.05■□□□□ 0.96
SCAMP3-207ENST00000480219 HSP90B1P14625 803 aaKnown RBP21.05■□□□□ 0.96
SCAMP3-207ENST00000480219 RWDD1Q9H446 243 aaPredicted RBP21.05■□□□□ 0.96
SCAMP3-207ENST00000480219 IRS4O14654 1257 aaPredicted RBP21.04■□□□□ 0.96
SCAMP3-207ENST00000480219 IGHDP01880 384 aa21.04■□□□□ 0.96
SCAMP3-207ENST00000480219 B4GALNT3Q6L9W6 998 aa21.04■□□□□ 0.96
SCAMP3-207ENST00000480219 PNMA6EA0A0J9YXQ4 647 aa21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 POLRMTO00411 1230 aaKnown RBP21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 PDE8AO60658 829 aa21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 HMMRO75330 724 aa21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 DDR1Q08345 913 aa21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 TPTE2Q6XPS3 522 aa21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 CENPQQ7L2Z9 268 aaPredicted RBP21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 SYNE4Q8N205 404 aa21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 JARID2Q92833 1246 aaPredicted RBP21.03■□□□□ 0.96
SCAMP3-207ENST00000480219 MYH3P11055 1940 aa21.02■□□□□ 0.96
SCAMP3-207ENST00000480219 RTL9Q8NET4 1388 aa21.02■□□□□ 0.96
SCAMP3-207ENST00000480219 SMC5Q8IY18 1101 aa21.02■□□□□ 0.96
SCAMP3-207ENST00000480219 BICDL1Q6ZP65 573 aa21.01■□□□□ 0.95
SCAMP3-207ENST00000480219 NBPF5PQ86XG9 351 aaPredicted RBP21.01■□□□□ 0.95
SCAMP3-207ENST00000480219 ABCC12Q96J65 1359 aa21■□□□□ 0.95
SCAMP3-207ENST00000480219 CTSWP56202 376 aa21■□□□□ 0.95
SCAMP3-207ENST00000480219 ERFEQ4G0M1 354 aa21■□□□□ 0.95
SCAMP3-207ENST00000480219 RTL5Q5HYW3 569 aaPredicted RBP21■□□□□ 0.95
SCAMP3-207ENST00000480219 DCTPP1Q9H773 170 aa21■□□□□ 0.95
SCAMP3-207ENST00000480219 MSH5O43196 834 aa20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 SRGAP3O43295 1099 aa20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 SERPINB2P05120 415 aa20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 RFX5P48382 616 aaPredicted RBP20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 PRR5LQ6MZQ0 368 aa20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 LMBR1LQ6UX01 489 aa20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 NUTM1Q86Y26 1132 aa20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 TTLL11Q8NHH1 800 aa20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 GCC1Q96CN9 775 aa20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 NOP58Q9Y2X3 529 aaKnown RBP20.99■□□□□ 0.95
SCAMP3-207ENST00000480219 SF3B3Q15393 1217 aaKnown RBP20.98■□□□□ 0.95
SCAMP3-207ENST00000480219 FAM177BA6PVY3 158 aa20.97■□□□□ 0.95
SCAMP3-207ENST00000480219 HCLS1P14317 486 aaPredicted RBP20.97■□□□□ 0.95
SCAMP3-207ENST00000480219 CNBD1Q8NA66 436 aa20.97■□□□□ 0.95
SCAMP3-207ENST00000480219 PDGFDQ9GZP0 370 aaPredicted RBP20.97■□□□□ 0.95
SCAMP3-207ENST00000480219 COPRSQ9NQ92 184 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms