RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 RFC4P35249 363 aa11.33□□□□□ -0.6
NUDCD3-208ENST00000480209 TBC1D9BQ66K14 1250 aa11.33□□□□□ -0.6
NUDCD3-208ENST00000480209 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
NUDCD3-208ENST00000480209 JARID2Q92833 1246 aaPredicted RBP11.33□□□□□ -0.6
NUDCD3-208ENST00000480209 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
NUDCD3-208ENST00000480209 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
NUDCD3-208ENST00000480209 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
NUDCD3-208ENST00000480209 TAF1P21675 1872 aa11.33□□□□□ -0.6
NUDCD3-208ENST00000480209 ABCC12Q96J65 1359 aa11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 RGL2O15211 777 aa11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 CASP7P55210 303 aa11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 GCKRQ14397 625 aa11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 GTF3C3Q9Y5Q9 886 aa11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 UTYO14607 1347 aa11.32□□□□□ -0.6
NUDCD3-208ENST00000480209 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 GRM8O00222 908 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 ZPR1O75312 459 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 NTSR2O95665 410 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 NEXNQ0ZGT2 675 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 HSP90AB3PQ58FF7 597 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 CLEC4GQ6UXB4 293 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 CCDC191Q8NCU4 936 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 KAZALD1Q96I82 304 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 CWC25Q9NXE8 425 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 NIP7Q9Y221 180 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 ZNF652Q9Y2D9 606 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 CACNA1SQ13698 1873 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 LRP5O75197 1615 aa11.31□□□□□ -0.6
NUDCD3-208ENST00000480209 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 CARMIL3Q8ND23 1372 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 KIAA1551Q9HCM1 1747 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 DDR1Q08345 913 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 TRIM28Q13263 835 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 NFIXQ14938 502 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 SUSD4Q5VX71 490 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 MSL1Q68DK7 614 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 BICDL1Q6ZP65 573 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 UBE3BQ7Z3V4 1068 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
NUDCD3-208ENST00000480209 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
NUDCD3-208ENST00000480209 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
NUDCD3-208ENST00000480209 H7C1W4 665 aa11.29□□□□□ -0.6
NUDCD3-208ENST00000480209 EPHA10Q5JZY3 1008 aa11.29□□□□□ -0.6
NUDCD3-208ENST00000480209 FLAD1Q8NFF5 587 aa11.29□□□□□ -0.6
NUDCD3-208ENST00000480209 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-208ENST00000480209 PCCAP05165 728 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 HMGB2P26583 209 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 TM4SF1P30408 202 aa11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 ANKRD44Q8N8A2 993 aa11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 FAM89AQ96GI7 184 aa11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 C9orf78Q9NZ63 289 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-208ENST00000480209 PSDA5PKW4 1024 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-208ENST00000480209 POLRMTO00411 1230 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-208ENST00000480209 GNAI3P08754 354 aa11.27□□□□□ -0.61
NUDCD3-208ENST00000480209 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
NUDCD3-208ENST00000480209 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-208ENST00000480209 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-208ENST00000480209 TRMT112Q9UI30 125 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-208ENST00000480209 CDHR2Q9BYE9 1310 aa11.27□□□□□ -0.61
NUDCD3-208ENST00000480209 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 GNAI2P04899 355 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 FOXO4P98177 505 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 ERFEQ4G0M1 354 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 CEP85Q6P2H3 762 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 CCDC24Q8N4L8 307 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 SETDB2Q96T68 719 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 UTP14AQ9BVJ6 771 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 SH3TC1Q8TE82 1336 aa11.26□□□□□ -0.61
NUDCD3-208ENST00000480209 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
NUDCD3-208ENST00000480209 HCLS1P14317 486 aaPredicted RBP11.25□□□□□ -0.61
NUDCD3-208ENST00000480209 HOXD11P31277 338 aaPredicted RBP11.25□□□□□ -0.61
NUDCD3-208ENST00000480209 PRR5LQ6MZQ0 368 aa11.25□□□□□ -0.61
NUDCD3-208ENST00000480209 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
NUDCD3-208ENST00000480209 IRS4O14654 1257 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-208ENST00000480209 IGHDP01880 384 aa11.24□□□□□ -0.61
NUDCD3-208ENST00000480209 MMP10P09238 476 aa11.24□□□□□ -0.61
NUDCD3-208ENST00000480209 RABL6Q3YEC7 729 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-208ENST00000480209 ERICH6BQ5W0A0 696 aa11.24□□□□□ -0.61
NUDCD3-208ENST00000480209 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
NUDCD3-208ENST00000480209 PPP1R42Q7Z4L9 355 aa11.24□□□□□ -0.61
NUDCD3-208ENST00000480209 PLA2G12BQ9BX93 195 aa11.24□□□□□ -0.61
NUDCD3-208ENST00000480209 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
NUDCD3-208ENST00000480209 ZBTB7AO95365 584 aa11.23□□□□□ -0.61
NUDCD3-208ENST00000480209 SERPINB2P05120 415 aa11.23□□□□□ -0.61
NUDCD3-208ENST00000480209 MTX1Q13505 466 aa11.23□□□□□ -0.61
NUDCD3-208ENST00000480209 AAMPQ13685 434 aa11.23□□□□□ -0.61
NUDCD3-208ENST00000480209 NBPF5PQ86XG9 351 aaPredicted RBP11.23□□□□□ -0.61
NUDCD3-208ENST00000480209 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
NUDCD3-208ENST00000480209 CNBD1Q8NA66 436 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms