RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 ANXA1P04083 346 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 INTS3Q68E01 1043 aaKnown RBP7.16□□□□□ -1.26
CPS1-207ENST00000479988 ZGPATQ8N5A5 531 aaKnown RBP7.16□□□□□ -1.26
CPS1-207ENST00000479988 MRPL50Q8N5N7 158 aaKnown RBP7.16□□□□□ -1.26
CPS1-207ENST00000479988 AIDAQ96BJ3 306 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 FEZ1Q99689 392 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 FSD1Q9BTV5 496 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 CDK12Q9NYV4 1490 aaPredicted RBP7.16□□□□□ -1.26
CPS1-207ENST00000479988 PI4KAP2A4QPH2 592 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 PIP4K2AP48426 406 aaPredicted RBP7.16□□□□□ -1.26
CPS1-207ENST00000479988 FKBP4Q02790 459 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPS1-207ENST00000479988 SART3Q15020 963 aaKnown RBP7.16□□□□□ -1.26
CPS1-207ENST00000479988 PI4KAP1Q8N8J0 262 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 ZBTB40Q9NUA8 1239 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 DIP2AQ14689 1571 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 RIMBP2O15034 1052 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 USP5P45974 858 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 TCIRG1Q13488 830 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 RNF20Q5VTR2 975 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 IL27Q8NEV9 243 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 HOOK2Q96ED9 719 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 VEZTQ9HBM0 779 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 CHPF2Q9P2E5 772 aa7.16□□□□□ -1.26
CPS1-207ENST00000479988 IDH1O75874 414 aaKnown RBP7.15□□□□□ -1.26
CPS1-207ENST00000479988 BAG3O95817 575 aa7.15□□□□□ -1.26
CPS1-207ENST00000479988 ZKSCAN1P17029 563 aaPredicted RBP7.15□□□□□ -1.26
CPS1-207ENST00000479988 C8orf34Q49A92 452 aa7.15□□□□□ -1.26
CPS1-207ENST00000479988 TECPR2O15040 1411 aa7.15□□□□□ -1.26
CPS1-207ENST00000479988 ST18O60284 1047 aa7.15□□□□□ -1.26
CPS1-207ENST00000479988 RLBP1P12271 317 aa7.15□□□□□ -1.26
CPS1-207ENST00000479988 CRKLP46109 303 aaKnown RBP7.15□□□□□ -1.26
CPS1-207ENST00000479988 USPL1Q5W0Q7 1092 aa7.15□□□□□ -1.26
CPS1-207ENST00000479988 CC2D2BQ6DHV5 1058 aa7.15□□□□□ -1.26
CPS1-207ENST00000479988 DDX21Q9NR30 783 aaKnown RBP eCLIP7.15□□□□□ -1.26
CPS1-207ENST00000479988 A1BGP04217 495 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 MPNDQ8N594 471 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 GGA1Q9UJY5 639 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 ASAP1Q9ULH1 1129 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 KIF13AQ9H1H9 1805 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 SERPINB2P05120 415 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 POLR3DP05423 398 aaPredicted RBP7.15□□□□□ -1.27
CPS1-207ENST00000479988 HLA-DOAP06340 250 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 BMP2KLQ5H9B9 411 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 NFXL1Q6ZNB6 911 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 ZNF496Q96IT1 587 aaPredicted RBP7.15□□□□□ -1.27
CPS1-207ENST00000479988 PHACTR3Q96KR7 559 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 CCDC43Q96MW1 224 aaKnown RBP7.15□□□□□ -1.27
CPS1-207ENST00000479988 SLKQ9H2G2 1235 aaPredicted RBP7.15□□□□□ -1.27
CPS1-207ENST00000479988 MTMR7Q9Y216 660 aa7.15□□□□□ -1.27
CPS1-207ENST00000479988 DDX11L8A8MPP1 907 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 UFL1O94874 794 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 GSTO1P78417 241 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 CPSF1Q10570 1443 aaKnown RBP7.14□□□□□ -1.27
CPS1-207ENST00000479988 TTLL6Q8N841 843 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 RASSF8Q8NHQ8 419 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 GPBP1L1Q9HC44 474 aaPredicted RBP7.14□□□□□ -1.27
CPS1-207ENST00000479988 NUCB1Q02818 461 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 MAP3K12Q12852 859 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 EZH2Q15910 746 aaKnown RBP7.14□□□□□ -1.27
CPS1-207ENST00000479988 CCDC93Q567U6 631 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 KSR2Q6VAB6 950 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 CABP5Q9NP86 173 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 ARHGEF6Q15052 776 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 NFKBIBQ15653 356 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 MYOM1P52179 1685 aa7.14□□□□□ -1.27
CPS1-207ENST00000479988 CHL1O00533 1208 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 IL6STP40189 918 aaPredicted RBP7.13□□□□□ -1.27
CPS1-207ENST00000479988 ARHGEF28Q8N1W1 1705 aaKnown RBP7.13□□□□□ -1.27
CPS1-207ENST00000479988 MPHOSPH10O00566 681 aaKnown RBP7.13□□□□□ -1.27
CPS1-207ENST00000479988 RPS6KA4O75676 772 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 KCNQ4P56696 695 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 GSE1Q14687 1217 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 CCDC34Q96HJ3 373 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 F8W031 263 aaPredicted RBP7.13□□□□□ -1.27
CPS1-207ENST00000479988 HIP1O00291 1037 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 HOXB7P09629 217 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 SSFA2P28290 1259 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 TNIP1Q15025 636 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 SKOR2Q2VWA4 1001 aaPredicted RBP7.13□□□□□ -1.27
CPS1-207ENST00000479988 SULF1Q8IWU6 871 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 LGR6Q9HBX8 967 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 BIN2Q9UBW5 565 aaPredicted RBP7.13□□□□□ -1.27
CPS1-207ENST00000479988 CIZ1Q9ULV3 898 aaPredicted RBP7.13□□□□□ -1.27
CPS1-207ENST00000479988 LRRFIP2Q9Y608 721 aaKnown RBP7.13□□□□□ -1.27
CPS1-207ENST00000479988 LRRC7Q96NW7 1537 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 GOLGA6L4A6NEF3 574 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 TBC1D32Q96NH3 1257 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 MTFR1LQ9H019 292 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 MST1RQ04912 1400 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 SSH2Q76I76 1423 aa7.13□□□□□ -1.27
CPS1-207ENST00000479988 ERBB4Q15303 1308 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 TDO2P48775 406 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 SLC15A2Q16348 729 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 TMC4Q7Z404 712 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 AACSQ86V21 672 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 CNTROBQ8N137 903 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 LINS1Q8NG48 757 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 PLBD2Q8NHP8 589 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 CPLX1O14810 134 aa7.12□□□□□ -1.27
CPS1-207ENST00000479988 ALDH1L1O75891 902 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms