RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 TFCP2L1Q9NZI6 479 aa17.77■□□□□ 0.44
RPP40-205ENST00000479782 HDAC1Q13547 482 aaPredicted RBP17.76■□□□□ 0.43
RPP40-205ENST00000479782 ZNF827Q17R98 1081 aa17.76■□□□□ 0.43
RPP40-205ENST00000479782 NLRP10Q86W26 655 aa17.76■□□□□ 0.43
RPP40-205ENST00000479782 LRRFIP2Q9Y608 721 aaKnown RBP17.76■□□□□ 0.43
RPP40-205ENST00000479782 H7C1W4 665 aa17.75■□□□□ 0.43
RPP40-205ENST00000479782 USPL1Q5W0Q7 1092 aa17.75■□□□□ 0.43
RPP40-205ENST00000479782 ANKRD44Q8N8A2 993 aa17.75■□□□□ 0.43
RPP40-205ENST00000479782 COL24A1Q17RW2 1714 aa17.75■□□□□ 0.43
RPP40-205ENST00000479782 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
RPP40-205ENST00000479782 PCCAP05165 728 aaPredicted RBP17.74■□□□□ 0.43
RPP40-205ENST00000479782 GPTP24298 496 aa17.74■□□□□ 0.43
RPP40-205ENST00000479782 CEP85Q6P2H3 762 aa17.74■□□□□ 0.43
RPP40-205ENST00000479782 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
RPP40-205ENST00000479782 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
RPP40-205ENST00000479782 UBE3BQ7Z3V4 1068 aa17.74■□□□□ 0.43
RPP40-205ENST00000479782 ZBTB38Q8NAP3 1195 aaPredicted RBP17.74■□□□□ 0.43
RPP40-205ENST00000479782 BCL2L12Q9HB09 334 aa17.74■□□□□ 0.43
RPP40-205ENST00000479782 SRP68Q9UHB9 627 aaKnown RBP17.74■□□□□ 0.43
RPP40-205ENST00000479782 NIP7Q9Y221 180 aaKnown RBP eCLIP17.74■□□□□ 0.43
RPP40-205ENST00000479782 HMMRO75330 724 aa17.73■□□□□ 0.43
RPP40-205ENST00000479782 CASP7P55210 303 aa17.73■□□□□ 0.43
RPP40-205ENST00000479782 PPP1R42Q7Z4L9 355 aa17.73■□□□□ 0.43
RPP40-205ENST00000479782 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
RPP40-205ENST00000479782 STK32BQ9NY57 414 aa17.73■□□□□ 0.43
RPP40-205ENST00000479782 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
RPP40-205ENST00000479782 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
RPP40-205ENST00000479782 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
RPP40-205ENST00000479782 IGHDP01880 384 aa17.71■□□□□ 0.43
RPP40-205ENST00000479782 ATP8B2P98198 1209 aa17.71■□□□□ 0.43
RPP40-205ENST00000479782 MTX1Q13505 466 aa17.71■□□□□ 0.43
RPP40-205ENST00000479782 SUCLG2Q96I99 432 aa17.71■□□□□ 0.43
RPP40-205ENST00000479782 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
RPP40-205ENST00000479782 LAMB2P55268 1798 aa17.71■□□□□ 0.43
RPP40-205ENST00000479782 GYS1P13807 737 aa17.7■□□□□ 0.42
RPP40-205ENST00000479782 TBC1D9BQ66K14 1250 aa17.7■□□□□ 0.42
RPP40-205ENST00000479782 SIRT2Q8IXJ6 389 aa17.7■□□□□ 0.42
RPP40-205ENST00000479782 UPF1Q92900 1129 aaKnown RBP eCLIP17.7■□□□□ 0.42
RPP40-205ENST00000479782 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
RPP40-205ENST00000479782 UTP14AQ9BVJ6 771 aaKnown RBP17.7■□□□□ 0.42
RPP40-205ENST00000479782 ANO8Q9HCE9 1232 aaPredicted RBP17.7■□□□□ 0.42
RPP40-205ENST00000479782 PNPLA7Q6ZV29 1317 aa17.7■□□□□ 0.42
RPP40-205ENST00000479782 HSP90B1P14625 803 aaKnown RBP17.69■□□□□ 0.42
RPP40-205ENST00000479782 SUSD4Q5VX71 490 aa17.69■□□□□ 0.42
RPP40-205ENST00000479782 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
RPP40-205ENST00000479782 KAZALD1Q96I82 304 aa17.69■□□□□ 0.42
RPP40-205ENST00000479782 PLA2G12BQ9BX93 195 aa17.69■□□□□ 0.42
RPP40-205ENST00000479782 NYXQ9GZU5 481 aa17.69■□□□□ 0.42
RPP40-205ENST00000479782 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
RPP40-205ENST00000479782 SH3TC1Q8TE82 1336 aa17.69■□□□□ 0.42
RPP40-205ENST00000479782 CARMIL3Q8ND23 1372 aa17.68■□□□□ 0.42
RPP40-205ENST00000479782 NTSR2O95665 410 aa17.68■□□□□ 0.42
RPP40-205ENST00000479782 RABL6Q3YEC7 729 aaPredicted RBP17.68■□□□□ 0.42
RPP40-205ENST00000479782 COL23A1Q86Y22 540 aaPredicted RBP17.68■□□□□ 0.42
RPP40-205ENST00000479782 SSH3Q8TE77 659 aa17.68■□□□□ 0.42
RPP40-205ENST00000479782 GCC1Q96CN9 775 aa17.68■□□□□ 0.42
RPP40-205ENST00000479782 MYH3P11055 1940 aa17.68■□□□□ 0.42
RPP40-205ENST00000479782 POLA2Q14181 598 aa17.67■□□□□ 0.42
RPP40-205ENST00000479782 JARID2Q92833 1246 aaPredicted RBP17.67■□□□□ 0.42
RPP40-205ENST00000479782 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
RPP40-205ENST00000479782 PNMA6EA0A0J9YXQ4 647 aa17.66■□□□□ 0.42
RPP40-205ENST00000479782 IRS4O14654 1257 aaPredicted RBP17.66■□□□□ 0.42
RPP40-205ENST00000479782 SRGAP3O43295 1099 aa17.66■□□□□ 0.42
RPP40-205ENST00000479782 FOXO4P98177 505 aa17.66■□□□□ 0.42
RPP40-205ENST00000479782 RTL5Q5HYW3 569 aaPredicted RBP17.66■□□□□ 0.42
RPP40-205ENST00000479782 BICDL1Q6ZP65 573 aa17.66■□□□□ 0.42
RPP40-205ENST00000479782 SMC5Q8IY18 1101 aa17.66■□□□□ 0.42
RPP40-205ENST00000479782 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
RPP40-205ENST00000479782 PDE8AO60658 829 aa17.65■□□□□ 0.42
RPP40-205ENST00000479782 NFIXQ14938 502 aa17.65■□□□□ 0.42
RPP40-205ENST00000479782 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
RPP40-205ENST00000479782 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
RPP40-205ENST00000479782 DCTPP1Q9H773 170 aa17.65■□□□□ 0.42
RPP40-205ENST00000479782 TM4SF1P30408 202 aa17.64■□□□□ 0.41
RPP40-205ENST00000479782 NBPF5PQ86XG9 351 aaPredicted RBP17.64■□□□□ 0.41
RPP40-205ENST00000479782 FAM177BA6PVY3 158 aa17.63■□□□□ 0.41
RPP40-205ENST00000479782 GTF2E1P29083 439 aaPredicted RBP17.63■□□□□ 0.41
RPP40-205ENST00000479782 LMBR1LQ6UX01 489 aa17.63■□□□□ 0.41
RPP40-205ENST00000479782 CSF1RP07333 972 aa17.62■□□□□ 0.41
RPP40-205ENST00000479782 CTSWP56202 376 aa17.62■□□□□ 0.41
RPP40-205ENST00000479782 SLC10A5Q5PT55 438 aa17.62■□□□□ 0.41
RPP40-205ENST00000479782 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
RPP40-205ENST00000479782 RIC1Q4ADV7 1423 aa17.62■□□□□ 0.41
RPP40-205ENST00000479782 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
RPP40-205ENST00000479782 CASZ1Q86V15 1759 aa17.61■□□□□ 0.41
RPP40-205ENST00000479782 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
RPP40-205ENST00000479782 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
RPP40-205ENST00000479782 NUTM1Q86Y26 1132 aa17.61■□□□□ 0.41
RPP40-205ENST00000479782 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
RPP40-205ENST00000479782 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
RPP40-205ENST00000479782 NOP58Q9Y2X3 529 aaKnown RBP17.6■□□□□ 0.41
RPP40-205ENST00000479782 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
RPP40-205ENST00000479782 RTL9Q8NET4 1388 aa17.59■□□□□ 0.41
RPP40-205ENST00000479782 POLRMTO00411 1230 aaKnown RBP17.59■□□□□ 0.41
RPP40-205ENST00000479782 NPHP1O15259 732 aa17.59■□□□□ 0.41
RPP40-205ENST00000479782 RAB11FIP3O75154 756 aa17.59■□□□□ 0.41
RPP40-205ENST00000479782 SERPINB2P05120 415 aa17.59■□□□□ 0.41
RPP40-205ENST00000479782 HCLS1P14317 486 aaPredicted RBP17.59■□□□□ 0.41
RPP40-205ENST00000479782 RFX5P48382 616 aaPredicted RBP17.59■□□□□ 0.41
RPP40-205ENST00000479782 SLC16A10Q8TF71 515 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms