RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
COL13A1-208ENST00000479733 NPHP1O15259 732 aa24.5■■□□□ 1.51
COL13A1-208ENST00000479733 AACSQ86V21 672 aa24.5■■□□□ 1.51
COL13A1-208ENST00000479733 CEP170BQ9Y4F5 1589 aaPredicted RBP24.5■■□□□ 1.51
COL13A1-208ENST00000479733 MAP3K5Q99683 1374 aa24.5■■□□□ 1.51
COL13A1-208ENST00000479733 NMIQ13287 307 aaPredicted RBP24.5■■□□□ 1.51
COL13A1-208ENST00000479733 DNAAF4Q8WXU2 420 aa24.5■■□□□ 1.51
COL13A1-208ENST00000479733 CLSTN2Q9H4D0 955 aa24.5■■□□□ 1.51
COL13A1-208ENST00000479733 TRMT1Q9NXH9 659 aaKnown RBP24.5■■□□□ 1.51
COL13A1-208ENST00000479733 PDCP20941 246 aa24.49■■□□□ 1.51
COL13A1-208ENST00000479733 PGBD1Q96JS3 809 aa24.49■■□□□ 1.51
COL13A1-208ENST00000479733 TTC41PQ6P2S7 1318 aa24.49■■□□□ 1.51
COL13A1-208ENST00000479733 FOSBP53539 338 aa24.49■■□□□ 1.51
COL13A1-208ENST00000479733 HSP90AB4PQ58FF6 505 aa24.49■■□□□ 1.51
COL13A1-208ENST00000479733 BLOC1S2Q6QNY1 142 aa24.49■■□□□ 1.51
COL13A1-208ENST00000479733 FBXW7Q969H0 707 aa24.49■■□□□ 1.51
COL13A1-208ENST00000479733 DDX19AQ9NUU7 478 aaKnown RBP24.49■■□□□ 1.51
COL13A1-208ENST00000479733 NPHP3Q7Z494 1330 aa24.49■■□□□ 1.51
COL13A1-208ENST00000479733 SLC27A2O14975 620 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 PAXBP1Q9Y5B6 917 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 ELP1O95163 1332 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 IGSF1Q8N6C5 1336 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 TTC21AQ8NDW8 1320 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 XRN1Q8IZH2 1706 aaKnown RBP24.48■■□□□ 1.51
COL13A1-208ENST00000479733 FLT4P35916 1363 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 BEND3Q5T5X7 828 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 FILIP1Q7Z7B0 1213 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 TDRD7Q8NHU6 1098 aaKnown RBP24.48■■□□□ 1.51
COL13A1-208ENST00000479733 CCDC8Q9H0W5 538 aaPredicted RBP24.48■■□□□ 1.51
COL13A1-208ENST00000479733 JAK2O60674 1132 aa24.48■■□□□ 1.51
COL13A1-208ENST00000479733 DDX41Q9UJV9 622 aaKnown RBP24.48■■□□□ 1.51
COL13A1-208ENST00000479733 USP6P35125 1406 aa24.47■■□□□ 1.51
COL13A1-208ENST00000479733 GOLGA6L19H0YKK7 550 aa24.47■■□□□ 1.51
COL13A1-208ENST00000479733 NGDNQ8NEJ9 315 aaKnown RBP24.47■■□□□ 1.51
COL13A1-208ENST00000479733 GPATCH3Q96I76 525 aa24.46■■□□□ 1.51
COL13A1-208ENST00000479733 ZNF215Q9UL58 517 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-208ENST00000479733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.46■■□□□ 1.51
COL13A1-208ENST00000479733 ITSN1Q15811 1721 aa24.46■■□□□ 1.51
COL13A1-208ENST00000479733 PLEKHG3A1L390 1219 aa24.46■■□□□ 1.51
COL13A1-208ENST00000479733 EVI5LQ96CN4 794 aa24.46■■□□□ 1.51
COL13A1-208ENST00000479733 KDRP35968 1356 aa24.46■■□□□ 1.51
COL13A1-208ENST00000479733 PSMA5P28066 241 aa24.45■■□□□ 1.51
COL13A1-208ENST00000479733 BOLA2Q9H3K6 86 aa24.45■■□□□ 1.51
COL13A1-208ENST00000479733 C9orf78Q9NZ63 289 aaPredicted RBP24.45■■□□□ 1.51
COL13A1-208ENST00000479733 USP16Q9Y5T5 823 aa24.45■■□□□ 1.51
COL13A1-208ENST00000479733 KCNQ3O43525 872 aa24.45■■□□□ 1.5
COL13A1-208ENST00000479733 HTATSF1O43719 755 aaKnown RBP24.45■■□□□ 1.5
COL13A1-208ENST00000479733 MAP4K1Q92918 833 aa24.45■■□□□ 1.5
COL13A1-208ENST00000479733 SBNO1A3KN83 1393 aa24.45■■□□□ 1.5
COL13A1-208ENST00000479733 A0A0D9SFI3 127 aa24.45■■□□□ 1.5
COL13A1-208ENST00000479733 LRRC8AQ8IWT6 810 aa24.45■■□□□ 1.5
COL13A1-208ENST00000479733 KIF18AQ8NI77 898 aa24.45■■□□□ 1.5
COL13A1-208ENST00000479733 USP31Q70CQ4 1352 aa24.44■■□□□ 1.5
COL13A1-208ENST00000479733 NLRP6P59044 892 aa24.44■■□□□ 1.5
COL13A1-208ENST00000479733 C11orf57Q6ZUT1 292 aaPredicted RBP24.44■■□□□ 1.5
COL13A1-208ENST00000479733 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.44■■□□□ 1.5
COL13A1-208ENST00000479733 KLHL34Q8N239 644 aa24.44■■□□□ 1.5
COL13A1-208ENST00000479733 KCNB2Q92953 911 aa24.44■■□□□ 1.5
COL13A1-208ENST00000479733 SETD1AO15047 1707 aaKnown RBP24.43■■□□□ 1.5
COL13A1-208ENST00000479733 SKILP12757 684 aa24.43■■□□□ 1.5
COL13A1-208ENST00000479733 TOB2Q14106 344 aaPredicted RBP24.43■■□□□ 1.5
COL13A1-208ENST00000479733 PTPN14Q15678 1187 aa24.43■■□□□ 1.5
COL13A1-208ENST00000479733 AKAP12Q02952 1782 aa24.43■■□□□ 1.5
COL13A1-208ENST00000479733 KMT5BQ4FZB7 885 aa24.43■■□□□ 1.5
COL13A1-208ENST00000479733 ERCC4Q92889 916 aaPredicted RBP24.43■■□□□ 1.5
COL13A1-208ENST00000479733 FSD1Q9BTV5 496 aa24.43■■□□□ 1.5
COL13A1-208ENST00000479733 PPFIA3O75145 1194 aa24.42■■□□□ 1.5
COL13A1-208ENST00000479733 SYCP1Q15431 976 aa24.42■■□□□ 1.5
COL13A1-208ENST00000479733 SIL1Q9H173 461 aa24.42■■□□□ 1.5
COL13A1-208ENST00000479733 RGPD1P0DJD0 1748 aa24.42■■□□□ 1.5
COL13A1-208ENST00000479733 H3BQV1 296 aa24.42■■□□□ 1.5
COL13A1-208ENST00000479733 IFFO2Q5TF58 517 aa24.42■■□□□ 1.5
COL13A1-208ENST00000479733 TLR7Q9NYK1 1049 aaKnown RBP24.42■■□□□ 1.5
COL13A1-208ENST00000479733 USP42Q9H9J4 1324 aaKnown RBP24.42■■□□□ 1.5
COL13A1-208ENST00000479733 RPS6KB1P23443 525 aa24.41■■□□□ 1.5
COL13A1-208ENST00000479733 BRF1Q92994 677 aa24.41■■□□□ 1.5
COL13A1-208ENST00000479733 SYTL4Q96C24 671 aaPredicted RBP24.41■■□□□ 1.5
COL13A1-208ENST00000479733 LGR6Q9HBX8 967 aa24.41■■□□□ 1.5
COL13A1-208ENST00000479733 SLFN14P0C7P3 912 aa24.41■■□□□ 1.5
COL13A1-208ENST00000479733 FTOQ9C0B1 505 aaKnown RBP eCLIP24.41■■□□□ 1.5
COL13A1-208ENST00000479733 ZBTB22O15209 634 aa24.41■■□□□ 1.5
COL13A1-208ENST00000479733 CWF19L2Q2TBE0 894 aaKnown RBP24.41■■□□□ 1.5
COL13A1-208ENST00000479733 RBM43Q6ZSC3 357 aaKnown RBP24.41■■□□□ 1.5
COL13A1-208ENST00000479733 BECN2A8MW95 431 aa24.4■■□□□ 1.5
COL13A1-208ENST00000479733 ELF2Q15723 593 aa24.4■■□□□ 1.5
COL13A1-208ENST00000479733 EDC3Q96F86 508 aaKnown RBP24.4■■□□□ 1.5
COL13A1-208ENST00000479733 FAM208AQ9UK61 1670 aaKnown RBP24.4■■□□□ 1.5
COL13A1-208ENST00000479733 HSP90B1P14625 803 aaKnown RBP24.4■■□□□ 1.5
COL13A1-208ENST00000479733 RNF20Q5VTR2 975 aa24.4■■□□□ 1.5
COL13A1-208ENST00000479733 ZNF589Q86UQ0 364 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-208ENST00000479733 EAF2Q96CJ1 260 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-208ENST00000479733 SIRT1Q96EB6 747 aa24.4■■□□□ 1.5
COL13A1-208ENST00000479733 LRRC2Q9BYS8 371 aa24.39■■□□□ 1.5
COL13A1-208ENST00000479733 MORC2Q9Y6X9 1032 aaPredicted RBP24.39■■□□□ 1.5
COL13A1-208ENST00000479733 ANKRD1Q15327 319 aa24.39■■□□□ 1.49
COL13A1-208ENST00000479733 SLC26A8Q96RN1 970 aa24.39■■□□□ 1.49
COL13A1-208ENST00000479733 ST7Q9NRC1 585 aa24.39■■□□□ 1.49
COL13A1-208ENST00000479733 CCDC69A6NI79 296 aa24.38■■□□□ 1.49
COL13A1-208ENST00000479733 GABPB1Q06547 395 aaPredicted RBP24.38■■□□□ 1.49
COL13A1-208ENST00000479733 IQCB1Q15051 598 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms