RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
CLDN18-203ENST00000479660 TBC1D32Q96NH3 1257 aa17.74■□□□□ 0.43
CLDN18-203ENST00000479660 QTRT2Q9H974 415 aaKnown RBP17.74■□□□□ 0.43
CLDN18-203ENST00000479660 TBC1D2BQ9UPU7 963 aa17.74■□□□□ 0.43
CLDN18-203ENST00000479660 ERVV-1B6SEH8 477 aa17.73■□□□□ 0.43
CLDN18-203ENST00000479660 FOXO4P98177 505 aa17.73■□□□□ 0.43
CLDN18-203ENST00000479660 LMBR1LQ6UX01 489 aa17.73■□□□□ 0.43
CLDN18-203ENST00000479660 SIL1Q9H173 461 aa17.73■□□□□ 0.43
CLDN18-203ENST00000479660 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
CLDN18-203ENST00000479660 SEPT12Q8IYM1 358 aa17.72■□□□□ 0.43
CLDN18-203ENST00000479660 COPRSQ9NQ92 184 aa17.72■□□□□ 0.43
CLDN18-203ENST00000479660 RFX5P48382 616 aaPredicted RBP17.72■□□□□ 0.43
CLDN18-203ENST00000479660 CHMP3Q9Y3E7 222 aa17.72■□□□□ 0.43
CLDN18-203ENST00000479660 SASH1O94885 1247 aa17.71■□□□□ 0.43
CLDN18-203ENST00000479660 GPTP24298 496 aa17.71■□□□□ 0.43
CLDN18-203ENST00000479660 PTPN12Q05209 780 aaKnown RBP17.71■□□□□ 0.43
CLDN18-203ENST00000479660 C22orf23Q9BZE7 217 aa17.71■□□□□ 0.43
CLDN18-203ENST00000479660 AOX1Q06278 1338 aa17.71■□□□□ 0.43
CLDN18-203ENST00000479660 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
CLDN18-203ENST00000479660 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
CLDN18-203ENST00000479660 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
CLDN18-203ENST00000479660 FAM89AQ96GI7 184 aa17.7■□□□□ 0.42
CLDN18-203ENST00000479660 CASC1Q6TDU7 716 aa17.69■□□□□ 0.42
CLDN18-203ENST00000479660 TRIM6-TRIM34B2RNG4 842 aa17.69■□□□□ 0.42
CLDN18-203ENST00000479660 IFIT2P09913 472 aaKnown RBP17.69■□□□□ 0.42
CLDN18-203ENST00000479660 CICQ96RK0 1608 aaPredicted RBP17.69■□□□□ 0.42
CLDN18-203ENST00000479660 MYH14Q7Z406 1995 aaKnown RBP17.68■□□□□ 0.42
CLDN18-203ENST00000479660 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
CLDN18-203ENST00000479660 AACSQ86V21 672 aa17.68■□□□□ 0.42
CLDN18-203ENST00000479660 KCNQ4P56696 695 aa17.67■□□□□ 0.42
CLDN18-203ENST00000479660 LINC00116Q8NCU8 138 aa17.67■□□□□ 0.42
CLDN18-203ENST00000479660 PI4K2BQ8TCG2 481 aa17.67■□□□□ 0.42
CLDN18-203ENST00000479660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.67■□□□□ 0.42
CLDN18-203ENST00000479660 RILPL2Q969X0 211 aa17.67■□□□□ 0.42
CLDN18-203ENST00000479660 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
CLDN18-203ENST00000479660 NUP98P52948 1817 aa17.66■□□□□ 0.42
CLDN18-203ENST00000479660 ZNF34Q8IZ26 560 aa17.66■□□□□ 0.42
CLDN18-203ENST00000479660 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
CLDN18-203ENST00000479660 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
CLDN18-203ENST00000479660 USP42Q9H9J4 1324 aaKnown RBP17.66■□□□□ 0.42
CLDN18-203ENST00000479660 ZNF831Q5JPB2 1677 aa17.66■□□□□ 0.42
CLDN18-203ENST00000479660 RREB1Q92766 1687 aa17.66■□□□□ 0.42
CLDN18-203ENST00000479660 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
CLDN18-203ENST00000479660 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
CLDN18-203ENST00000479660 NHSQ6T4R5 1651 aa17.65■□□□□ 0.42
CLDN18-203ENST00000479660 CDHR2Q9BYE9 1310 aa17.65■□□□□ 0.42
CLDN18-203ENST00000479660 ERC2O15083 957 aa17.65■□□□□ 0.42
CLDN18-203ENST00000479660 CAMTA2O94983 1202 aa17.65■□□□□ 0.42
CLDN18-203ENST00000479660 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
CLDN18-203ENST00000479660 CCDC8Q9H0W5 538 aaPredicted RBP17.65■□□□□ 0.42
CLDN18-203ENST00000479660 ECHDC1Q9NTX5 307 aa17.65■□□□□ 0.42
CLDN18-203ENST00000479660 BTAF1O14981 1849 aa17.65■□□□□ 0.42
CLDN18-203ENST00000479660 UBN2Q6ZU65 1347 aa17.64■□□□□ 0.41
CLDN18-203ENST00000479660 GLRX3O76003 335 aaKnown RBP17.64■□□□□ 0.41
CLDN18-203ENST00000479660 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
CLDN18-203ENST00000479660 ANKRD36CQ5JPF3 1778 aa17.64■□□□□ 0.41
CLDN18-203ENST00000479660 COL5A3P25940 1745 aaPredicted RBP17.64■□□□□ 0.41
CLDN18-203ENST00000479660 RBM25P49756 843 aaKnown RBP17.64■□□□□ 0.41
CLDN18-203ENST00000479660 TFCP2Q12800 502 aa17.64■□□□□ 0.41
CLDN18-203ENST00000479660 CCDC57Q2TAC2 916 aa17.64■□□□□ 0.41
CLDN18-203ENST00000479660 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
CLDN18-203ENST00000479660 CNTNAP4Q9C0A0 1308 aa17.63■□□□□ 0.41
CLDN18-203ENST00000479660 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
CLDN18-203ENST00000479660 TUBGCP6Q96RT7 1819 aa17.63■□□□□ 0.41
CLDN18-203ENST00000479660 IRS4O14654 1257 aaPredicted RBP17.62■□□□□ 0.41
CLDN18-203ENST00000479660 MAP4K4O95819 1239 aaPredicted RBP17.62■□□□□ 0.41
CLDN18-203ENST00000479660 CSF1RP07333 972 aa17.62■□□□□ 0.41
CLDN18-203ENST00000479660 ZNF594Q96JF6 807 aaPredicted RBP17.62■□□□□ 0.41
CLDN18-203ENST00000479660 RC3H1Q5TC82 1133 aaKnown RBP17.62■□□□□ 0.41
CLDN18-203ENST00000479660 CCDC85AQ96PX6 553 aaPredicted RBP17.62■□□□□ 0.41
CLDN18-203ENST00000479660 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
CLDN18-203ENST00000479660 SLC4A3P48751 1232 aa17.61■□□□□ 0.41
CLDN18-203ENST00000479660 TNNI3KQ59H18 835 aa17.61■□□□□ 0.41
CLDN18-203ENST00000479660 ATG9AQ7Z3C6 839 aa17.61■□□□□ 0.41
CLDN18-203ENST00000479660 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
CLDN18-203ENST00000479660 BCL11BQ9C0K0 894 aaPredicted RBP17.61■□□□□ 0.41
CLDN18-203ENST00000479660 TLR7Q9NYK1 1049 aaKnown RBP17.61■□□□□ 0.41
CLDN18-203ENST00000479660 ZNF652Q9Y2D9 606 aa17.61■□□□□ 0.41
CLDN18-203ENST00000479660 FPGT-TNNI3KV9GXZ4 949 aa17.61■□□□□ 0.41
CLDN18-203ENST00000479660 EYA2O00167 538 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 CHMLP26374 656 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 IFIT5Q13325 482 aaKnown RBP17.6■□□□□ 0.41
CLDN18-203ENST00000479660 PARP10Q53GL7 1025 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 SBF2Q86WG5 1849 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 REC8O95072 547 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 LRRC24Q50LG9 513 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 KRT27Q7Z3Y8 459 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
CLDN18-203ENST00000479660 NIP7Q9Y221 180 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLDN18-203ENST00000479660 FAM177BA6PVY3 158 aa17.59■□□□□ 0.41
CLDN18-203ENST00000479660 PDE8AO60658 829 aa17.59■□□□□ 0.41
CLDN18-203ENST00000479660 CIAO1O76071 339 aa17.59■□□□□ 0.41
CLDN18-203ENST00000479660 CTSWP56202 376 aa17.59■□□□□ 0.41
CLDN18-203ENST00000479660 CLEC4GQ6UXB4 293 aa17.59■□□□□ 0.41
CLDN18-203ENST00000479660 FAM196AQ6ZSG2 479 aa17.59■□□□□ 0.41
CLDN18-203ENST00000479660 UTP14AQ9BVJ6 771 aaKnown RBP17.59■□□□□ 0.41
CLDN18-203ENST00000479660 BECN1Q14457 450 aa17.59■□□□□ 0.41
CLDN18-203ENST00000479660 TAF7LQ5H9L4 462 aa17.59■□□□□ 0.41
CLDN18-203ENST00000479660 ZNF772Q68DY9 489 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms