RNA–Protein interactions for RNA: ENST00000479153.1

SUMO3-206, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 1,736 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-206ENST00000479153 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
SUMO3-206ENST00000479153 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
SUMO3-206ENST00000479153 SERPINB2P05120 415 aa16.59■□□□□ 0.25
SUMO3-206ENST00000479153 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
SUMO3-206ENST00000479153 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
SUMO3-206ENST00000479153 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
SUMO3-206ENST00000479153 NUTM1Q86Y26 1132 aa16.59■□□□□ 0.25
SUMO3-206ENST00000479153 ITPRIPQ8IWB1 547 aa16.59■□□□□ 0.25
SUMO3-206ENST00000479153 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
SUMO3-206ENST00000479153 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
SUMO3-206ENST00000479153 NPHP1O15259 732 aa16.58■□□□□ 0.24
SUMO3-206ENST00000479153 IRX6P78412 446 aaPredicted RBP16.58■□□□□ 0.24
SUMO3-206ENST00000479153 TRIM28Q13263 835 aaKnown RBP16.58■□□□□ 0.24
SUMO3-206ENST00000479153 GCKRQ14397 625 aa16.58■□□□□ 0.24
SUMO3-206ENST00000479153 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
SUMO3-206ENST00000479153 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
SUMO3-206ENST00000479153 TRMT112Q9UI30 125 aaKnown RBP16.58■□□□□ 0.24
SUMO3-206ENST00000479153 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
SUMO3-206ENST00000479153 SRCAPQ6ZRS2 3230 aa16.57■□□□□ 0.24
SUMO3-206ENST00000479153 ALDH1L1O75891 902 aa16.57■□□□□ 0.24
SUMO3-206ENST00000479153 NTSR2O95665 410 aa16.57■□□□□ 0.24
SUMO3-206ENST00000479153 MS4A1P11836 297 aa16.57■□□□□ 0.24
SUMO3-206ENST00000479153 PPP1R42Q7Z4L9 355 aa16.57■□□□□ 0.24
SUMO3-206ENST00000479153 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
SUMO3-206ENST00000479153 UTP14AQ9BVJ6 771 aaKnown RBP16.57■□□□□ 0.24
SUMO3-206ENST00000479153 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
SUMO3-206ENST00000479153 GTF2E1P29083 439 aaPredicted RBP16.56■□□□□ 0.24
SUMO3-206ENST00000479153 C9orf78Q9NZ63 289 aaPredicted RBP16.56■□□□□ 0.24
SUMO3-206ENST00000479153 POLD1P28340 1107 aa16.56■□□□□ 0.24
SUMO3-206ENST00000479153 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
SUMO3-206ENST00000479153 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
SUMO3-206ENST00000479153 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
SUMO3-206ENST00000479153 PTGER2P43116 358 aa16.55■□□□□ 0.24
SUMO3-206ENST00000479153 ERFEQ4G0M1 354 aa16.55■□□□□ 0.24
SUMO3-206ENST00000479153 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
SUMO3-206ENST00000479153 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
SUMO3-206ENST00000479153 NYXQ9GZU5 481 aa16.55■□□□□ 0.24
SUMO3-206ENST00000479153 SPON1Q9HCB6 807 aa16.55■□□□□ 0.24
SUMO3-206ENST00000479153 DDX60Q8IY21 1712 aaKnown RBP16.55■□□□□ 0.24
SUMO3-206ENST00000479153 GRM8O00222 908 aa16.54■□□□□ 0.24
SUMO3-206ENST00000479153 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
SUMO3-206ENST00000479153 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
SUMO3-206ENST00000479153 ZBTB38Q8NAP3 1195 aaPredicted RBP16.54■□□□□ 0.24
SUMO3-206ENST00000479153 MEIS3Q99687 375 aa16.54■□□□□ 0.24
SUMO3-206ENST00000479153 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
SUMO3-206ENST00000479153 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
SUMO3-206ENST00000479153 MYH3P11055 1940 aa16.54■□□□□ 0.24
SUMO3-206ENST00000479153 SH3TC1Q8TE82 1336 aa16.54■□□□□ 0.24
SUMO3-206ENST00000479153 ANKRD31Q8N7Z5 1873 aa16.54■□□□□ 0.24
SUMO3-206ENST00000479153 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
SUMO3-206ENST00000479153 ABCC12Q96J65 1359 aa16.53■□□□□ 0.24
SUMO3-206ENST00000479153 LAMB2P55268 1798 aa16.53■□□□□ 0.24
SUMO3-206ENST00000479153 H7C1W4 665 aa16.53■□□□□ 0.24
SUMO3-206ENST00000479153 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
SUMO3-206ENST00000479153 CRBNQ96SW2 442 aa16.53■□□□□ 0.24
SUMO3-206ENST00000479153 ST5P78524 1137 aa16.52■□□□□ 0.24
SUMO3-206ENST00000479153 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.23
SUMO3-206ENST00000479153 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.23
SUMO3-206ENST00000479153 IRS4O14654 1257 aaPredicted RBP16.51■□□□□ 0.23
SUMO3-206ENST00000479153 CASP7P55210 303 aa16.51■□□□□ 0.23
SUMO3-206ENST00000479153 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
SUMO3-206ENST00000479153 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
SUMO3-206ENST00000479153 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
SUMO3-206ENST00000479153 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
SUMO3-206ENST00000479153 UBTFL1P0CB47 393 aaPredicted RBP16.5■□□□□ 0.23
SUMO3-206ENST00000479153 C1orf115Q9H7X2 142 aa16.5■□□□□ 0.23
SUMO3-206ENST00000479153 DDX19BQ9UMR2 479 aa16.5■□□□□ 0.23
SUMO3-206ENST00000479153 TAF1P21675 1872 aa16.49■□□□□ 0.23
SUMO3-206ENST00000479153 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
SUMO3-206ENST00000479153 UTYO14607 1347 aa16.49■□□□□ 0.23
SUMO3-206ENST00000479153 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
SUMO3-206ENST00000479153 KIF13BQ9NQT8 1826 aa16.48■□□□□ 0.23
SUMO3-206ENST00000479153 EPHA10Q5JZY3 1008 aa16.48■□□□□ 0.23
SUMO3-206ENST00000479153 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
SUMO3-206ENST00000479153 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
SUMO3-206ENST00000479153 GNAI3P08754 354 aa16.48■□□□□ 0.23
SUMO3-206ENST00000479153 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
SUMO3-206ENST00000479153 KAZALD1Q96I82 304 aa16.48■□□□□ 0.23
SUMO3-206ENST00000479153 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
SUMO3-206ENST00000479153 C10orf71Q711Q0 1435 aa16.47■□□□□ 0.23
SUMO3-206ENST00000479153 COL11A2P13942 1736 aaPredicted RBP16.47■□□□□ 0.23
SUMO3-206ENST00000479153 PDE8AO60658 829 aa16.47■□□□□ 0.23
SUMO3-206ENST00000479153 SLC10A5Q5PT55 438 aa16.47■□□□□ 0.23
SUMO3-206ENST00000479153 GOLGB1Q14789 3259 aaKnown RBP16.47■□□□□ 0.23
SUMO3-206ENST00000479153 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.23
SUMO3-206ENST00000479153 NLRP3Q96P20 1036 aa16.46■□□□□ 0.23
SUMO3-206ENST00000479153 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
SUMO3-206ENST00000479153 BICC1Q9H694 974 aaKnown RBP16.46■□□□□ 0.23
SUMO3-206ENST00000479153 GNAI2P04899 355 aa16.45■□□□□ 0.22
SUMO3-206ENST00000479153 FOXO4P98177 505 aa16.45■□□□□ 0.22
SUMO3-206ENST00000479153 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
SUMO3-206ENST00000479153 CTSWP56202 376 aa16.45■□□□□ 0.22
SUMO3-206ENST00000479153 PLA2G12BQ9BX93 195 aa16.45■□□□□ 0.22
SUMO3-206ENST00000479153 ZBTB40Q9NUA8 1239 aa16.45■□□□□ 0.22
SUMO3-206ENST00000479153 CHRNA5P30532 468 aa16.44■□□□□ 0.22
SUMO3-206ENST00000479153 PDE6BP35913 854 aa16.44■□□□□ 0.22
SUMO3-206ENST00000479153 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
SUMO3-206ENST00000479153 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
SUMO3-206ENST00000479153 RIC1Q4ADV7 1423 aa16.43■□□□□ 0.22
SUMO3-206ENST00000479153 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms