RNA–Protein interactions for RNA: ENST00000479107.1

HLA-DPA1-247, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 5,025 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-247ENST00000479107 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 PARD3Q8TEW0 1356 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 FAM177BA6PVY3 158 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MARCH6O60337 910 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 PTCD1O75127 700 aaKnown RBP10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TXLNBQ8N3L3 684 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 STK3Q13188 491 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ADGRB3O60242 1522 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 SEC24BO95487 1268 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CASTP20810 708 aaKnown RBP10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 SLC27A3Q5K4L6 730 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 GDPD2Q9HCC8 539 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 OGFRQ9NZT2 677 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 LIMCH1Q9UPQ0 1083 aa10.08□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MX1P20591 662 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 KRT32Q14532 448 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 RRP12Q5JTH9 1297 aaKnown RBP10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CCDC83Q8IWF9 413 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ZNF830Q96NB3 372 aaPredicted RBP10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 NSD3Q9BZ95 1437 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ERICH2A1L162 156 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TTLL12Q14166 644 aaPredicted RBP10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ROBO2Q9HCK4 1378 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TTC21BQ7Z4L5 1316 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 PPRC1Q5VV67 1664 aaKnown RBP10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 IQCEQ6IPM2 695 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 FERMT3Q86UX7 667 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 GIMAP7Q8NHV1 300 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CARD10Q9BWT7 1032 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 GAS2L2Q8NHY3 880 aa10.07□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MED14O60244 1454 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MYO3AQ8NEV4 1616 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 GOLGA6L10A6NI86 522 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 NFE2L2Q16236 605 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TRMT1Q9NXH9 659 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 DNMT1P26358 1616 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 STX6O43752 255 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 SLC15A2Q16348 729 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CWC27Q6UX04 472 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TTC12Q9H892 705 aaPredicted RBP10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ZNHIT6Q9NWK9 470 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MYO6Q9UM54 1294 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 SHTN1A0MZ66 631 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 XBP1P17861 261 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 SNW1Q13573 536 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 JAKMIP3Q5VZ66 844 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ZNF165P49910 485 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 BRPF1P55201 1214 aaPredicted RBP10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CKAP2LQ8IYA6 745 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CRACR2AQ9BSW2 395 aa10.06□□□□□ -0.8
HLA-DPA1-247ENST00000479107 PCDH11XQ9BZA7 1347 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 PCDH11YQ9BZA8 1340 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 H0YIN7 160 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ARHGAP29Q52LW3 1261 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TTC22Q5TAA0 569 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 FRMPD1Q5SYB0 1578 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 SPATA31A5Q5VU36 1347 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 SPATA31A7Q8IWB4 1347 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 C3P01024 1663 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CASQ1P31415 396 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MAP9Q49MG5 647 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 EAPPQ56P03 285 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 PPIP5K1Q6PFW1 1433 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TMX3Q96JJ7 454 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MAST1Q9Y2H9 1570 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 WASHC4Q2M389 1173 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ZNF397Q8NF99 534 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 RPGRQ92834 1020 aaKnown RBP10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TEX13AQ9BXU3 409 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 BRMS1Q9HCU9 246 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MCM3P25205 808 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 BARGINQ6ZT62 677 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MYRIPQ8NFW9 859 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
HLA-DPA1-247ENST00000479107 IQGAP1P46940 1657 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 GOLGA6L7A0A1B0GV03 622 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 EXOC6BQ9Y2D4 811 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 SMARCA5O60264 1052 aaPredicted RBP10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 ZNF445P59923 1031 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 GOLGA6L9A6NEM1 432 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 EPB41L2O43491 1005 aaKnown RBP10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 RALGAPBQ86X10 1494 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 TUBB4AP04350 444 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 LMAN1P49257 510 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CCDC186Q7Z3E2 898 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 NME9Q86XW9 330 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
HLA-DPA1-247ENST00000479107 EIF6P56537 245 aaKnown RBP10.03□□□□□ -0.8
HLA-DPA1-247ENST00000479107 STX1AQ16623 288 aa10.03□□□□□ -0.8
HLA-DPA1-247ENST00000479107 GIMAP6Q6P9H5 292 aa10.03□□□□□ -0.8
HLA-DPA1-247ENST00000479107 PIK3C2GO75747 1445 aa10.03□□□□□ -0.8
HLA-DPA1-247ENST00000479107 KIF5CO60282 957 aa10.03□□□□□ -0.8
HLA-DPA1-247ENST00000479107 CCDC181Q5TID7 509 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms