RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 PDE4DIPQ5VU43 2346 aa10.62□□□□□ -0.71
VPS45-208ENST00000478999 RASSF10A6NK89 507 aa10.62□□□□□ -0.71
VPS45-208ENST00000478999 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
VPS45-208ENST00000478999 TAF1DQ9H5J8 278 aaPredicted RBP10.62□□□□□ -0.71
VPS45-208ENST00000478999 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
VPS45-208ENST00000478999 WDR33Q9C0J8 1336 aaKnown RBP10.61□□□□□ -0.71
VPS45-208ENST00000478999 NPHP1O15259 732 aa10.61□□□□□ -0.71
VPS45-208ENST00000478999 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
VPS45-208ENST00000478999 ALDH1L2Q3SY69 923 aa10.61□□□□□ -0.71
VPS45-208ENST00000478999 ZKSCAN2Q63HK3 967 aa10.61□□□□□ -0.71
VPS45-208ENST00000478999 ZNF622Q969S3 477 aaKnown RBP eCLIP10.61□□□□□ -0.71
VPS45-208ENST00000478999 L3MBTL3Q96JM7 780 aaPredicted RBP10.61□□□□□ -0.71
VPS45-208ENST00000478999 TAOK3Q9H2K8 898 aa10.61□□□□□ -0.71
VPS45-208ENST00000478999 CHMP4BQ9H444 224 aaKnown RBP10.61□□□□□ -0.71
VPS45-208ENST00000478999 ZBTB1Q9Y2K1 713 aa10.61□□□□□ -0.71
VPS45-208ENST00000478999 RRP7AQ9Y3A4 280 aaKnown RBP10.61□□□□□ -0.71
VPS45-208ENST00000478999 IQCA1LA6NCM1 817 aa10.6□□□□□ -0.71
VPS45-208ENST00000478999 IPO8O15397 1037 aaKnown RBP10.6□□□□□ -0.71
VPS45-208ENST00000478999 STARD3NLO95772 234 aa10.6□□□□□ -0.71
VPS45-208ENST00000478999 CYP19A1P11511 503 aaPredicted RBP10.6□□□□□ -0.71
VPS45-208ENST00000478999 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
VPS45-208ENST00000478999 DEFB115Q30KQ5 88 aa10.6□□□□□ -0.71
VPS45-208ENST00000478999 EAPPQ56P03 285 aaPredicted RBP10.6□□□□□ -0.71
VPS45-208ENST00000478999 RTF1Q92541 710 aaKnown RBP10.6□□□□□ -0.71
VPS45-208ENST00000478999 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
VPS45-208ENST00000478999 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
VPS45-208ENST00000478999 NUP98P52948 1817 aa10.59□□□□□ -0.71
VPS45-208ENST00000478999 PRKAR2BP31323 418 aa10.59□□□□□ -0.71
VPS45-208ENST00000478999 MAP2K1Q02750 393 aaPredicted RBP10.59□□□□□ -0.71
VPS45-208ENST00000478999 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
VPS45-208ENST00000478999 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
VPS45-208ENST00000478999 CCDC24Q8N4L8 307 aa10.59□□□□□ -0.71
VPS45-208ENST00000478999 KDM3BQ7LBC6 1761 aa10.58□□□□□ -0.72
VPS45-208ENST00000478999 A0A087WZG4 1122 aa10.58□□□□□ -0.72
VPS45-208ENST00000478999 RIPK4P57078 832 aa10.58□□□□□ -0.72
VPS45-208ENST00000478999 MVPQ14764 893 aaKnown RBP10.58□□□□□ -0.72
VPS45-208ENST00000478999 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
VPS45-208ENST00000478999 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
VPS45-208ENST00000478999 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
VPS45-208ENST00000478999 RWDD1Q9H446 243 aaPredicted RBP10.58□□□□□ -0.72
VPS45-208ENST00000478999 DDX19BQ9UMR2 479 aa10.58□□□□□ -0.72
VPS45-208ENST00000478999 ZNF541Q9H0D2 1346 aa10.58□□□□□ -0.72
VPS45-208ENST00000478999 BTBD11A6QL63 1104 aa10.57□□□□□ -0.72
VPS45-208ENST00000478999 PDE6BP35913 854 aa10.57□□□□□ -0.72
VPS45-208ENST00000478999 TBC1D9BQ66K14 1250 aa10.57□□□□□ -0.72
VPS45-208ENST00000478999 MAP1SQ66K74 1059 aaPredicted RBP10.57□□□□□ -0.72
VPS45-208ENST00000478999 PRR5LQ6MZQ0 368 aa10.57□□□□□ -0.72
VPS45-208ENST00000478999 FTSJ3Q8IY81 847 aaKnown RBP10.57□□□□□ -0.72
VPS45-208ENST00000478999 DZIP1LQ8IYY4 767 aaKnown RBP10.57□□□□□ -0.72
VPS45-208ENST00000478999 FMNL2Q96PY5 1086 aa10.57□□□□□ -0.72
VPS45-208ENST00000478999 TSKSQ9UJT2 592 aa10.57□□□□□ -0.72
VPS45-208ENST00000478999 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
VPS45-208ENST00000478999 HEG1Q9ULI3 1381 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 EPHX2P34913 555 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 GNAI1P63096 354 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 PRPF40BQ6NWY9 871 aaKnown RBP10.56□□□□□ -0.72
VPS45-208ENST00000478999 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 CNTROBQ8N137 903 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 PANK1Q8TE04 598 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 FRAT1Q92837 279 aaPredicted RBP10.56□□□□□ -0.72
VPS45-208ENST00000478999 CFAP44Q96MT7 982 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 BRIP1Q9BX63 1249 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 SMC4Q9NTJ3 1288 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 IFT57Q9NWB7 429 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 HACL1Q9UJ83 578 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 ABT1Q9ULW3 272 aaKnown RBP10.56□□□□□ -0.72
VPS45-208ENST00000478999 PDZRN3Q9UPQ7 1066 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 COG6Q9Y2V7 657 aa10.56□□□□□ -0.72
VPS45-208ENST00000478999 EXOSC9Q06265 439 aaKnown RBP10.55□□□□□ -0.72
VPS45-208ENST00000478999 FMR1Q06787 632 aaKnown RBP eCLIP10.55□□□□□ -0.72
VPS45-208ENST00000478999 C8orf34Q49A92 452 aa10.55□□□□□ -0.72
VPS45-208ENST00000478999 ATF7IPQ6VMQ6 1270 aa10.55□□□□□ -0.72
VPS45-208ENST00000478999 ARHGAP45Q92619 1136 aa10.55□□□□□ -0.72
VPS45-208ENST00000478999 MCOLN1Q9GZU1 580 aa10.55□□□□□ -0.72
VPS45-208ENST00000478999 HDAC1Q13547 482 aaPredicted RBP10.54□□□□□ -0.72
VPS45-208ENST00000478999 CYP4F22Q6NT55 531 aa10.54□□□□□ -0.72
VPS45-208ENST00000478999 IL17REQ8NFR9 667 aa10.54□□□□□ -0.72
VPS45-208ENST00000478999 ZNF496Q96IT1 587 aaPredicted RBP10.54□□□□□ -0.72
VPS45-208ENST00000478999 CAPNS2Q96L46 248 aa10.54□□□□□ -0.72
VPS45-208ENST00000478999 DDX21Q9NR30 783 aaKnown RBP eCLIP10.54□□□□□ -0.72
VPS45-208ENST00000478999 ANKRD36CQ5JPF3 1778 aa10.53□□□□□ -0.72
VPS45-208ENST00000478999 SRGNP10124 158 aa10.53□□□□□ -0.72
VPS45-208ENST00000478999 EIF5P55010 431 aaKnown RBP10.53□□□□□ -0.72
VPS45-208ENST00000478999 GRM1Q13255 1194 aa10.53□□□□□ -0.72
VPS45-208ENST00000478999 STYK1Q6J9G0 422 aa10.53□□□□□ -0.72
VPS45-208ENST00000478999 C7orf43Q8WVR3 580 aa10.53□□□□□ -0.72
VPS45-208ENST00000478999 CNKSR1Q969H4 720 aa10.53□□□□□ -0.72
VPS45-208ENST00000478999 GPR101Q96P66 508 aaPredicted RBP10.53□□□□□ -0.72
VPS45-208ENST00000478999 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
VPS45-208ENST00000478999 AOC2O75106 756 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 IGHDP01880 384 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 ZNF853P0CG23 659 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 RLBP1P12271 317 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 TRIM27P14373 513 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
VPS45-208ENST00000478999 ST5P78524 1137 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 SOGA3Q5TF21 947 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
VPS45-208ENST00000478999 MCM10Q7L590 875 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms