RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 PRIM1P49642 420 aaKnown RBP18.01■□□□□ 0.47
ITSN2-211ENST00000478720 NECTIN1Q15223 517 aa18.01■□□□□ 0.47
ITSN2-211ENST00000478720 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
ITSN2-211ENST00000478720 VPS53Q5VIR6 699 aa18.01■□□□□ 0.47
ITSN2-211ENST00000478720 PRPF40BQ6NWY9 871 aaKnown RBP18.01■□□□□ 0.47
ITSN2-211ENST00000478720 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
ITSN2-211ENST00000478720 ANP32BQ92688 251 aaKnown RBP18.01■□□□□ 0.47
ITSN2-211ENST00000478720 RBSNQ9H1K0 784 aa18.01■□□□□ 0.47
ITSN2-211ENST00000478720 ZSWIM6Q9HCJ5 1215 aa18.01■□□□□ 0.47
ITSN2-211ENST00000478720 TLR7Q9NYK1 1049 aaKnown RBP18.01■□□□□ 0.47
ITSN2-211ENST00000478720 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
ITSN2-211ENST00000478720 SPATA31A3Q5VYP0 1347 aa18.01■□□□□ 0.47
ITSN2-211ENST00000478720 LRSAM1Q6UWE0 723 aa18■□□□□ 0.47
ITSN2-211ENST00000478720 SIL1Q9H173 461 aa18■□□□□ 0.47
ITSN2-211ENST00000478720 COPRSQ9NQ92 184 aa18■□□□□ 0.47
ITSN2-211ENST00000478720 NMIQ13287 307 aaPredicted RBP17.99■□□□□ 0.47
ITSN2-211ENST00000478720 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
ITSN2-211ENST00000478720 ERBB4Q15303 1308 aa17.99■□□□□ 0.47
ITSN2-211ENST00000478720 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
ITSN2-211ENST00000478720 KLHDC4Q8TBB5 520 aa17.99■□□□□ 0.47
ITSN2-211ENST00000478720 FAM227BQ96M60 508 aa17.99■□□□□ 0.47
ITSN2-211ENST00000478720 PDRG1Q9NUG6 133 aa17.99■□□□□ 0.47
ITSN2-211ENST00000478720 CPA1P15085 419 aa17.98■□□□□ 0.47
ITSN2-211ENST00000478720 RFX5P48382 616 aaPredicted RBP17.98■□□□□ 0.47
ITSN2-211ENST00000478720 TMEM87AQ8NBN3 555 aa17.98■□□□□ 0.47
ITSN2-211ENST00000478720 MAP4K1Q92918 833 aa17.98■□□□□ 0.47
ITSN2-211ENST00000478720 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
ITSN2-211ENST00000478720 RBM8AQ9Y5S9 174 aaKnown RBP17.98■□□□□ 0.47
ITSN2-211ENST00000478720 CYP46A1Q9Y6A2 500 aa17.98■□□□□ 0.47
ITSN2-211ENST00000478720 CABP4P57796 275 aa17.98■□□□□ 0.47
ITSN2-211ENST00000478720 RABL6Q3YEC7 729 aaPredicted RBP17.98■□□□□ 0.47
ITSN2-211ENST00000478720 CREB3L3Q68CJ9 461 aa17.98■□□□□ 0.47
ITSN2-211ENST00000478720 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
ITSN2-211ENST00000478720 BOLA2Q9H3K6 86 aa17.98■□□□□ 0.47
ITSN2-211ENST00000478720 MED23Q9ULK4 1368 aa17.97■□□□□ 0.47
ITSN2-211ENST00000478720 SYCE3A1L190 88 aa17.97■□□□□ 0.47
ITSN2-211ENST00000478720 LARGE1O95461 756 aa17.97■□□□□ 0.47
ITSN2-211ENST00000478720 ZSCAN22P10073 491 aaPredicted RBP17.97■□□□□ 0.47
ITSN2-211ENST00000478720 SH2B1Q9NRF2 756 aaPredicted RBP17.97■□□□□ 0.47
ITSN2-211ENST00000478720 SMC3Q9UQE7 1217 aa17.97■□□□□ 0.47
ITSN2-211ENST00000478720 JCADQ9P266 1359 aa17.96■□□□□ 0.47
ITSN2-211ENST00000478720 ZKSCAN1P17029 563 aaPredicted RBP17.96■□□□□ 0.47
ITSN2-211ENST00000478720 LARP6Q9BRS8 491 aaKnown RBP17.96■□□□□ 0.47
ITSN2-211ENST00000478720 A0A0D9SFI3 127 aa17.96■□□□□ 0.47
ITSN2-211ENST00000478720 STX6O43752 255 aa17.96■□□□□ 0.47
ITSN2-211ENST00000478720 SYT1P21579 422 aa17.96■□□□□ 0.47
ITSN2-211ENST00000478720 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
ITSN2-211ENST00000478720 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
ITSN2-211ENST00000478720 SYAP1Q96A49 352 aaPredicted RBP17.96■□□□□ 0.47
ITSN2-211ENST00000478720 FSD1Q9BTV5 496 aa17.96■□□□□ 0.47
ITSN2-211ENST00000478720 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
ITSN2-211ENST00000478720 PLBD2Q8NHP8 589 aa17.95■□□□□ 0.46
ITSN2-211ENST00000478720 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.95■□□□□ 0.46
ITSN2-211ENST00000478720 TCHHQ07283 1943 aa17.95■□□□□ 0.46
ITSN2-211ENST00000478720 SLC27A2O14975 620 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 CASP7P55210 303 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 GADD45BO75293 160 aaPredicted RBP17.94■□□□□ 0.46
ITSN2-211ENST00000478720 ATP5JP18859 108 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 TNNI3KQ59H18 835 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 PDLIM2Q96JY6 352 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 GDPD2Q9HCC8 539 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 FPGT-TNNI3KV9GXZ4 949 aa17.94■□□□□ 0.46
ITSN2-211ENST00000478720 XIRP1Q702N8 1843 aaKnown RBP17.93■□□□□ 0.46
ITSN2-211ENST00000478720 F13A1P00488 732 aa17.93■□□□□ 0.46
ITSN2-211ENST00000478720 PSMA5P28066 241 aa17.93■□□□□ 0.46
ITSN2-211ENST00000478720 KCNJ4P48050 445 aa17.93■□□□□ 0.46
ITSN2-211ENST00000478720 FOXD4L6Q3SYB3 417 aaPredicted RBP17.93■□□□□ 0.46
ITSN2-211ENST00000478720 FOXD4L3Q6VB84 417 aaPredicted RBP17.93■□□□□ 0.46
ITSN2-211ENST00000478720 CCDC83Q8IWF9 413 aa17.93■□□□□ 0.46
ITSN2-211ENST00000478720 JARID2Q92833 1246 aaPredicted RBP17.93■□□□□ 0.46
ITSN2-211ENST00000478720 DBNLQ9UJU6 430 aaKnown RBP17.93■□□□□ 0.46
ITSN2-211ENST00000478720 RFX7Q2KHR2 1363 aa17.93■□□□□ 0.46
ITSN2-211ENST00000478720 NUP188Q5SRE5 1749 aa17.93■□□□□ 0.46
ITSN2-211ENST00000478720 ST3GAL1Q11201 340 aa17.93■□□□□ 0.46
ITSN2-211ENST00000478720 A0A087WZG4 1122 aa17.92■□□□□ 0.46
ITSN2-211ENST00000478720 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
ITSN2-211ENST00000478720 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
ITSN2-211ENST00000478720 GJB2P29033 226 aa17.92■□□□□ 0.46
ITSN2-211ENST00000478720 TFCP2Q12800 502 aa17.92■□□□□ 0.46
ITSN2-211ENST00000478720 RNF20Q5VTR2 975 aa17.92■□□□□ 0.46
ITSN2-211ENST00000478720 ALDH8A1Q9H2A2 487 aaPredicted RBP17.92■□□□□ 0.46
ITSN2-211ENST00000478720 PAPPAQ13219 1627 aa17.92■□□□□ 0.46
ITSN2-211ENST00000478720 PHF14O94880 888 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 ME3Q16798 604 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 HS1BP3Q53T59 392 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 CNPY2Q9Y2B0 182 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 ATP6V1DQ9Y5K8 247 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 TSGA10IPQ3SY00 556 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 NBPF14Q5TI25 921 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
ITSN2-211ENST00000478720 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 HMG20BQ9P0W2 317 aa17.91■□□□□ 0.46
ITSN2-211ENST00000478720 WDR17Q8IZU2 1322 aa17.9■□□□□ 0.46
ITSN2-211ENST00000478720 ZNF589Q86UQ0 364 aaPredicted RBP17.9■□□□□ 0.46
ITSN2-211ENST00000478720 TSPY26PQ9H489 355 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms