RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 BCL2L13Q9BXK5 485 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 NYXQ9GZU5 481 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 MAP3K2Q9Y2U5 619 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 ADCY9O60503 1353 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 DDX60Q8IY21 1712 aaKnown RBP8.82□□□□□ -1
BRCA1-215ENST00000478531 PI4KAP2A4QPH2 592 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 YBX3P16989 372 aaKnown RBP eCLIP8.82□□□□□ -17e-6■■■□□ 18.9
BRCA1-215ENST00000478531 TCIRG1Q13488 830 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 ERFEQ4G0M1 354 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 PARP10Q53GL7 1025 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 PPP1R42Q7Z4L9 355 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 C2CD5Q86YS7 1000 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 TRMT2AQ8IZ69 625 aaKnown RBP8.82□□□□□ -1
BRCA1-215ENST00000478531 PI4KAP1Q8N8J0 262 aa8.82□□□□□ -1
BRCA1-215ENST00000478531 IBTKQ9P2D0 1353 aaPredicted RBP8.82□□□□□ -1
BRCA1-215ENST00000478531 H0YIN7 160 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 NTSR2O95665 410 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 PDE6BP35913 854 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 RTL5Q5HYW3 569 aaPredicted RBP8.81□□□□□ -1
BRCA1-215ENST00000478531 NLRP10Q86W26 655 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 UTP14AQ9BVJ6 771 aaKnown RBP8.81□□□□□ -1
BRCA1-215ENST00000478531 BRIP1Q9BX63 1249 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 TRMT112Q9UI30 125 aaKnown RBP8.81□□□□□ -1
BRCA1-215ENST00000478531 BCS1LQ9Y276 419 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 MYH3P11055 1940 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 KSR2Q6VAB6 950 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 ZNF622Q969S3 477 aaKnown RBP eCLIP8.81□□□□□ -15e-8■■■□□ 17.3
BRCA1-215ENST00000478531 SMC4Q9NTJ3 1288 aa8.81□□□□□ -1
BRCA1-215ENST00000478531 TAF1P21675 1872 aa8.8□□□□□ -1
BRCA1-215ENST00000478531 SLX4Q8IY92 1834 aa8.8□□□□□ -1
BRCA1-215ENST00000478531 KCNA3P22001 575 aa8.8□□□□□ -1
BRCA1-215ENST00000478531 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
BRCA1-215ENST00000478531 SYNE4Q8N205 404 aa8.8□□□□□ -1
BRCA1-215ENST00000478531 SSH1Q8WYL5 1049 aa8.8□□□□□ -1
BRCA1-215ENST00000478531 YTHDC1Q96MU7 727 aaKnown RBP8.8□□□□□ -1
BRCA1-215ENST00000478531 METTL22Q9BUU2 404 aaPredicted RBP8.8□□□□□ -1
BRCA1-215ENST00000478531 PIM2Q9P1W9 311 aa8.8□□□□□ -1
BRCA1-215ENST00000478531 F6X3S4 739 aa8.79□□□□□ -1
BRCA1-215ENST00000478531 DALRD3Q5D0E6 543 aaKnown RBP8.79□□□□□ -1
BRCA1-215ENST00000478531 ISCA1Q9BUE6 129 aa8.79□□□□□ -1
BRCA1-215ENST00000478531 SH3TC1Q8TE82 1336 aa8.79□□□□□ -1
BRCA1-215ENST00000478531 HCLS1P14317 486 aaPredicted RBP8.79□□□□□ -1
BRCA1-215ENST00000478531 CWF19L2Q2TBE0 894 aaKnown RBP8.79□□□□□ -1
BRCA1-215ENST00000478531 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
BRCA1-215ENST00000478531 DNAAF4Q8WXU2 420 aa8.79□□□□□ -1
BRCA1-215ENST00000478531 FAM89AQ96GI7 184 aa8.79□□□□□ -1
BRCA1-215ENST00000478531 CWC25Q9NXE8 425 aaPredicted RBP8.79□□□□□ -1
BRCA1-215ENST00000478531 ZNF219Q9P2Y4 722 aaPredicted RBP8.79□□□□□ -1
BRCA1-215ENST00000478531 IGKV5-2P06315 115 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 CT47B1P0C2W7 299 aaPredicted RBP8.78□□□□□ -1
BRCA1-215ENST00000478531 SRGNP10124 158 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 CCDC88AQ3V6T2 1871 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 RIC1Q4ADV7 1423 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 SLC4A10Q6U841 1118 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 C3orf67Q6ZVT6 689 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 TTLL6Q8N841 843 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 JARID2Q92833 1246 aaPredicted RBP8.78□□□□□ -1
BRCA1-215ENST00000478531 RPGRQ92834 1020 aaKnown RBP8.78□□□□□ -1
BRCA1-215ENST00000478531 RNF123Q5XPI4 1314 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 SPEF2Q9C093 1822 aa8.78□□□□□ -1
BRCA1-215ENST00000478531 ALDH1L2Q3SY69 923 aa8.77□□□□□ -1
BRCA1-215ENST00000478531 CCDC191Q8NCU4 936 aa8.77□□□□□ -1
BRCA1-215ENST00000478531 MASTLQ96GX5 879 aa8.77□□□□□ -1
BRCA1-215ENST00000478531 PDZRN3Q9UPQ7 1066 aa8.77□□□□□ -1
BRCA1-215ENST00000478531 NEURL1BA8MQ27 555 aa8.77□□□□□ -1.01
BRCA1-215ENST00000478531 GRIN3BO60391 1043 aa8.77□□□□□ -1.01
BRCA1-215ENST00000478531 NPR1P16066 1061 aa8.77□□□□□ -1.01
BRCA1-215ENST00000478531 TRIM28Q13263 835 aaKnown RBP8.77□□□□□ -1.01
BRCA1-215ENST00000478531 STYK1Q6J9G0 422 aa8.77□□□□□ -1.01
BRCA1-215ENST00000478531 PRPF40BQ6NWY9 871 aaKnown RBP8.77□□□□□ -1.01
BRCA1-215ENST00000478531 NLRP3Q96P20 1036 aa8.77□□□□□ -1.01
BRCA1-215ENST00000478531 FER1L6Q2WGJ9 1857 aa8.76□□□□□ -1.01
BRCA1-215ENST00000478531 IRS4O14654 1257 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-215ENST00000478531 RARSP54136 660 aaKnown RBP8.76□□□□□ -1.01
BRCA1-215ENST00000478531 ZBTB38Q8NAP3 1195 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-215ENST00000478531 CNKSR1Q969H4 720 aa8.76□□□□□ -1.01
BRCA1-215ENST00000478531 PTPRCP08575 1304 aa8.76□□□□□ -1.01
BRCA1-215ENST00000478531 SBF1O95248 1867 aa8.76□□□□□ -1.01
BRCA1-215ENST00000478531 KLRG2A4D1S0 409 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-215ENST00000478531 C21orf2O43822 256 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 PCCAP05165 728 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-215ENST00000478531 CRY2Q49AN0 593 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 UBE3BQ7Z3V4 1068 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 LINS1Q8NG48 757 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 BCAR3O75815 825 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 GCKRQ14397 625 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 SLC10A5Q5PT55 438 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 RBM17Q96I25 401 aaKnown RBP8.75□□□□□ -1.01
BRCA1-215ENST00000478531 CCDC85AQ96PX6 553 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-215ENST00000478531 NOB1Q9ULX3 412 aaKnown RBP8.75□□□□□ -1.01
BRCA1-215ENST00000478531 KIF16BQ96L93 1317 aa8.75□□□□□ -1.01
BRCA1-215ENST00000478531 COL4A1P02462 1669 aa8.74□□□□□ -1.01
BRCA1-215ENST00000478531 TIAM2Q8IVF5 1701 aa8.74□□□□□ -1.01
BRCA1-215ENST00000478531 RASSF7Q02833 373 aa8.74□□□□□ -1.01
BRCA1-215ENST00000478531 BEND3Q5T5X7 828 aa8.74□□□□□ -1.01
BRCA1-215ENST00000478531 OLFM4Q6UX06 510 aa8.74□□□□□ -1.01
BRCA1-215ENST00000478531 FRAT1Q92837 279 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-215ENST00000478531 SRCIN1Q9C0H9 1055 aa8.74□□□□□ -1.01
BRCA1-215ENST00000478531 ABCC4O15439 1325 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms