RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 HDGFL1Q5TGJ6 251 aa17.91■□□□□ 0.46
RCC1-211ENST00000478232 RBM17Q96I25 401 aaKnown RBP17.91■□□□□ 0.46
RCC1-211ENST00000478232 NLRP3Q96P20 1036 aa17.91■□□□□ 0.46
RCC1-211ENST00000478232 CRAMP1Q96RY5 1269 aa17.91■□□□□ 0.46
RCC1-211ENST00000478232 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
RCC1-211ENST00000478232 ABCC12Q96J65 1359 aa17.91■□□□□ 0.46
RCC1-211ENST00000478232 FER1L6Q2WGJ9 1857 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 RIC1Q4ADV7 1423 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 CEP350Q5VT06 3117 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 POTECB2RU33 542 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 GNAI1P63096 354 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 MBIPQ9NS73 344 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 CHPF2Q9P2E5 772 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 RNF123Q5XPI4 1314 aa17.9■□□□□ 0.46
RCC1-211ENST00000478232 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
RCC1-211ENST00000478232 OLFM4Q6UX06 510 aa17.89■□□□□ 0.45
RCC1-211ENST00000478232 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
RCC1-211ENST00000478232 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
RCC1-211ENST00000478232 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
RCC1-211ENST00000478232 HYPKQ9NX55 129 aa17.89■□□□□ 0.45
RCC1-211ENST00000478232 DDNO94850 711 aaPredicted RBP17.88■□□□□ 0.45
RCC1-211ENST00000478232 ANKRD13DQ6ZTN6 518 aa17.88■□□□□ 0.45
RCC1-211ENST00000478232 PLBD2Q8NHP8 589 aa17.88■□□□□ 0.45
RCC1-211ENST00000478232 ZNF277Q9NRM2 450 aaPredicted RBP17.88■□□□□ 0.45
RCC1-211ENST00000478232 CCDC88AQ3V6T2 1871 aa17.88■□□□□ 0.45
RCC1-211ENST00000478232 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
RCC1-211ENST00000478232 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
RCC1-211ENST00000478232 DNAJC5GQ8N7S2 189 aa17.87■□□□□ 0.45
RCC1-211ENST00000478232 PSMD1Q99460 953 aa17.87■□□□□ 0.45
RCC1-211ENST00000478232 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
RCC1-211ENST00000478232 IARSP41252 1262 aaKnown RBP17.86■□□□□ 0.45
RCC1-211ENST00000478232 CHMP4AQ9BY43 222 aa17.86■□□□□ 0.45
RCC1-211ENST00000478232 TMX4Q9H1E5 349 aaPredicted RBP17.86■□□□□ 0.45
RCC1-211ENST00000478232 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
RCC1-211ENST00000478232 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
RCC1-211ENST00000478232 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
RCC1-211ENST00000478232 DICER1Q9UPY3 1922 aaKnown RBP17.84■□□□□ 0.45
RCC1-211ENST00000478232 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
RCC1-211ENST00000478232 PPEF1O14829 653 aaPredicted RBP17.84■□□□□ 0.45
RCC1-211ENST00000478232 BBOX1O75936 387 aa17.84■□□□□ 0.45
RCC1-211ENST00000478232 JDP2Q8WYK2 163 aa17.84■□□□□ 0.45
RCC1-211ENST00000478232 TIAM2Q8IVF5 1701 aa17.84■□□□□ 0.45
RCC1-211ENST00000478232 IQCA1LA6NCM1 817 aa17.83■□□□□ 0.44
RCC1-211ENST00000478232 FZD9O00144 591 aa17.83■□□□□ 0.44
RCC1-211ENST00000478232 ELL2O00472 640 aaPredicted RBP17.83■□□□□ 0.44
RCC1-211ENST00000478232 HCLS1P14317 486 aaPredicted RBP17.83■□□□□ 0.44
RCC1-211ENST00000478232 L3MBTL3Q96JM7 780 aaPredicted RBP17.83■□□□□ 0.44
RCC1-211ENST00000478232 ISCA1Q9BUE6 129 aa17.83■□□□□ 0.44
RCC1-211ENST00000478232 ATP6V0A2Q9Y487 856 aa17.83■□□□□ 0.44
RCC1-211ENST00000478232 CACNA1SQ13698 1873 aa17.82■□□□□ 0.44
RCC1-211ENST00000478232 WDR90Q96KV7 1748 aa17.82■□□□□ 0.44
RCC1-211ENST00000478232 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
RCC1-211ENST00000478232 ANP32CO43423 234 aa17.82■□□□□ 0.44
RCC1-211ENST00000478232 TRIM28Q13263 835 aaKnown RBP17.82■□□□□ 0.44
RCC1-211ENST00000478232 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
RCC1-211ENST00000478232 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
RCC1-211ENST00000478232 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
RCC1-211ENST00000478232 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
RCC1-211ENST00000478232 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
RCC1-211ENST00000478232 VPS33BQ9H267 617 aa17.81■□□□□ 0.44
RCC1-211ENST00000478232 ATP5J2-PTCD1G3V325 749 aa17.8■□□□□ 0.44
RCC1-211ENST00000478232 CHADLQ6NUI6 762 aa17.8■□□□□ 0.44
RCC1-211ENST00000478232 RIC3Q7Z5B4 369 aa17.8■□□□□ 0.44
RCC1-211ENST00000478232 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
RCC1-211ENST00000478232 ABCC4O15439 1325 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 ZNF541Q9H0D2 1346 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 EIF6P56537 245 aaKnown RBP17.79■□□□□ 0.44
RCC1-211ENST00000478232 HTRA3P83110 453 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 GOLGA2Q08379 1002 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 CCDC30Q5VVM6 783 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 GPC2Q8N158 579 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 SUPT20HQ8NEM7 779 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 TAF1DQ9H5J8 278 aaPredicted RBP17.79■□□□□ 0.44
RCC1-211ENST00000478232 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
RCC1-211ENST00000478232 TMC4Q7Z404 712 aa17.78■□□□□ 0.44
RCC1-211ENST00000478232 WWC1Q8IX03 1113 aa17.78■□□□□ 0.44
RCC1-211ENST00000478232 KLRG1Q96E93 195 aa17.78■□□□□ 0.44
RCC1-211ENST00000478232 FAM89AQ96GI7 184 aa17.78■□□□□ 0.44
RCC1-211ENST00000478232 PHAXQ9H814 394 aaKnown RBP17.78■□□□□ 0.44
RCC1-211ENST00000478232 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
RCC1-211ENST00000478232 GRAPQ13588 217 aa17.77■□□□□ 0.44
RCC1-211ENST00000478232 SF3B3Q15393 1217 aaKnown RBP17.77■□□□□ 0.44
RCC1-211ENST00000478232 LDHDQ86WU2 507 aa17.77■□□□□ 0.44
RCC1-211ENST00000478232 GRAPLQ8TC17 118 aaPredicted RBP17.77■□□□□ 0.44
RCC1-211ENST00000478232 RTFDC1Q9BY42 306 aaPredicted RBP17.77■□□□□ 0.44
RCC1-211ENST00000478232 DDX58O95786 925 aaKnown RBP17.76■□□□□ 0.43
RCC1-211ENST00000478232 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
RCC1-211ENST00000478232 PNMA8AQ86V59 439 aaPredicted RBP17.76■□□□□ 0.43
RCC1-211ENST00000478232 MPNDQ8N594 471 aa17.76■□□□□ 0.43
RCC1-211ENST00000478232 ZNF428Q96B54 188 aa17.76■□□□□ 0.43
RCC1-211ENST00000478232 PPIP5K2O43314 1243 aa17.75■□□□□ 0.43
RCC1-211ENST00000478232 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
RCC1-211ENST00000478232 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
RCC1-211ENST00000478232 EPHX2P34913 555 aa17.75■□□□□ 0.43
RCC1-211ENST00000478232 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
RCC1-211ENST00000478232 NIM1KQ8IY84 436 aa17.75■□□□□ 0.43
RCC1-211ENST00000478232 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
RCC1-211ENST00000478232 GJA3Q9Y6H8 435 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms