RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 NEUROD6Q96NK8 337 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 IRS4O14654 1257 aaPredicted RBP9.34□□□□□ -0.91
SYCP3-204ENST00000478139 GNAI2P04899 355 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 HSP90AB4PQ58FF6 505 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 ITPK1Q13572 414 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 PTF1AQ7RTS3 328 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 ANKRD18AQ8IVF6 992 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 LINC00116Q8NCU8 138 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 LINS1Q8NG48 757 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 CNKSR1Q969H4 720 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 RBM17Q96I25 401 aaKnown RBP9.34□□□□□ -0.91
SYCP3-204ENST00000478139 PHAXQ9H814 394 aaKnown RBP9.34□□□□□ -0.91
SYCP3-204ENST00000478139 PTPRCP08575 1304 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 MAP3K15Q6ZN16 1313 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 NOL10Q9BSC4 688 aaKnown RBP9.33□□□□□ -0.92
SYCP3-204ENST00000478139 CEP126Q9P2H0 1117 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 NUTM1Q86Y26 1132 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 PIK3C2AO00443 1686 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 TRAK2O60296 914 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 VAMP4O75379 141 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 HCLS1P14317 486 aaPredicted RBP9.33□□□□□ -0.92
SYCP3-204ENST00000478139 ALDH1B1P30837 517 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 TCIRG1Q13488 830 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 C16orf71Q8IYS4 520 aaPredicted RBP9.33□□□□□ -0.92
SYCP3-204ENST00000478139 FAM89AQ96GI7 184 aa9.33□□□□□ -0.92
SYCP3-204ENST00000478139 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
SYCP3-204ENST00000478139 PRAMEF22A3QJZ6 481 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 SMIM5Q71RC9 77 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 TMEM57Q8N5G2 664 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 GNL3LQ9NVN8 582 aaKnown RBP9.32□□□□□ -0.92
SYCP3-204ENST00000478139 CHMP5Q9NZZ3 219 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 COL15A1P39059 1388 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 SURF6O75683 361 aaKnown RBP9.32□□□□□ -0.92
SYCP3-204ENST00000478139 CLEC4GQ6UXB4 293 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
SYCP3-204ENST00000478139 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
SYCP3-204ENST00000478139 NFAT5O94916 1531 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 METTL24Q5JXM2 366 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 HSCBQ8IWL3 235 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 CCDC191Q8NCU4 936 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 SIL1Q9H173 461 aa9.32□□□□□ -0.92
SYCP3-204ENST00000478139 KIF20BQ96Q89 1820 aa9.31□□□□□ -0.92
SYCP3-204ENST00000478139 FSD2A1L4K1 749 aa9.31□□□□□ -0.92
SYCP3-204ENST00000478139 ALDH1L1O75891 902 aa9.31□□□□□ -0.92
SYCP3-204ENST00000478139 LDHAL6AQ6ZMR3 332 aa9.31□□□□□ -0.92
SYCP3-204ENST00000478139 COL23A1Q86Y22 540 aaPredicted RBP9.31□□□□□ -0.92
SYCP3-204ENST00000478139 CAMKK2Q96RR4 588 aa9.31□□□□□ -0.92
SYCP3-204ENST00000478139 LNPKQ9C0E8 428 aa9.31□□□□□ -0.92
SYCP3-204ENST00000478139 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
SYCP3-204ENST00000478139 METTL22Q9BUU2 404 aaPredicted RBP9.31□□□□□ -0.92
SYCP3-204ENST00000478139 ZC3H12CQ9C0D7 883 aaKnown RBP9.31□□□□□ -0.92
SYCP3-204ENST00000478139 ERVV-1B6SEH8 477 aa9.3□□□□□ -0.92
SYCP3-204ENST00000478139 IFIT2P09913 472 aaKnown RBP9.3□□□□□ -0.92
SYCP3-204ENST00000478139 NRKQ7Z2Y5 1582 aa9.3□□□□□ -0.92
SYCP3-204ENST00000478139 MON2Q7Z3U7 1717 aa9.3□□□□□ -0.92
SYCP3-204ENST00000478139 SRGAP3O43295 1099 aa9.3□□□□□ -0.92
SYCP3-204ENST00000478139 HDAC1Q13547 482 aaPredicted RBP9.3□□□□□ -0.92
SYCP3-204ENST00000478139 CWF19L2Q2TBE0 894 aaKnown RBP9.3□□□□□ -0.92
SYCP3-204ENST00000478139 DALRD3Q5D0E6 543 aaKnown RBP9.3□□□□□ -0.92
SYCP3-204ENST00000478139 PIM2Q9P1W9 311 aa9.3□□□□□ -0.92
SYCP3-204ENST00000478139 GRM8O00222 908 aa9.3□□□□□ -0.92
SYCP3-204ENST00000478139 FOXD4L1Q9NU39 408 aa9.3□□□□□ -0.92
SYCP3-204ENST00000478139 BCL9O00512 1426 aa9.3□□□□□ -0.92
SYCP3-204ENST00000478139 IFIT1P09914 478 aaKnown RBP9.29□□□□□ -0.92
SYCP3-204ENST00000478139 EYA3Q99504 573 aa9.29□□□□□ -0.92
SYCP3-204ENST00000478139 SOGA3Q5TF21 947 aa9.29□□□□□ -0.92
SYCP3-204ENST00000478139 SMC5Q8IY18 1101 aa9.29□□□□□ -0.92
SYCP3-204ENST00000478139 TTLL6Q8N841 843 aa9.29□□□□□ -0.92
SYCP3-204ENST00000478139 EIF5P55010 431 aaKnown RBP9.29□□□□□ -0.92
SYCP3-204ENST00000478139 NFIXQ14938 502 aa9.29□□□□□ -0.92
SYCP3-204ENST00000478139 LMBR1LQ6UX01 489 aa9.29□□□□□ -0.92
SYCP3-204ENST00000478139 AKAP12Q02952 1782 aa9.29□□□□□ -0.92
SYCP3-204ENST00000478139 GRIN3BO60391 1043 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 PDE8AO60658 829 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 RBM5P52756 815 aaKnown RBP eCLIP9.28□□□□□ -0.92
SYCP3-204ENST00000478139 CAVIN4Q5BKX8 364 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 G2E3Q7L622 706 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 CLASRPQ8N2M8 674 aaKnown RBP9.28□□□□□ -0.92
SYCP3-204ENST00000478139 LARGE2Q8N3Y3 721 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 NAP1L5Q96NT1 182 aaPredicted RBP9.28□□□□□ -0.92
SYCP3-204ENST00000478139 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 XIRP1Q702N8 1843 aaKnown RBP9.28□□□□□ -0.92
SYCP3-204ENST00000478139 PROSER3Q2NL68 480 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 DPY19L2Q6NUT2 758 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 C1orf115Q9H7X2 142 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 LRRC4BQ9NT99 713 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 ZBTB40Q9NUA8 1239 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 PLEKHG2Q9H7P9 1386 aa9.28□□□□□ -0.92
SYCP3-204ENST00000478139 TOPAZ1Q8N9V7 1692 aa9.27□□□□□ -0.92
SYCP3-204ENST00000478139 CHAF1AQ13111 956 aaPredicted RBP9.27□□□□□ -0.92
SYCP3-204ENST00000478139 DPP8Q6V1X1 898 aaPredicted RBP9.27□□□□□ -0.92
SYCP3-204ENST00000478139 SUPT20HQ8NEM7 779 aa9.27□□□□□ -0.92
SYCP3-204ENST00000478139 ABCC6O95255 1503 aa9.27□□□□□ -0.93
SYCP3-204ENST00000478139 EIF6P56537 245 aaKnown RBP9.27□□□□□ -0.93
SYCP3-204ENST00000478139 CASC1Q6TDU7 716 aa9.27□□□□□ -0.93
SYCP3-204ENST00000478139 ERC1Q8IUD2 1116 aa9.27□□□□□ -0.93
SYCP3-204ENST00000478139 NPM3O75607 178 aaKnown RBP9.27□□□□□ -0.93
SYCP3-204ENST00000478139 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
SYCP3-204ENST00000478139 ZNF827Q17R98 1081 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms