RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 CCDC24Q8N4L8 307 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 UBAC1Q9BSL1 405 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 TFCP2L1Q9NZI6 479 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 CAMSAP1Q5T5Y3 1602 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 GCKRQ14397 625 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 SUCLG2Q96I99 432 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 ZNF594Q96JF6 807 aaPredicted RBP14.06□□□□□ -0.16
SGSM3-209ENST00000478085 TCEANC2Q96MN5 208 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
SGSM3-209ENST00000478085 DIP2BQ9P265 1576 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 PPFIA3O75145 1194 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 TPM4P67936 248 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 TTLL7Q6ZT98 887 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
SGSM3-209ENST00000478085 CCNL1Q9UK58 526 aaPredicted RBP14.06□□□□□ -0.16
SGSM3-209ENST00000478085 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 CCDC69A6NI79 296 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 CCDC73Q6ZRK6 1079 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 DZIP1Q86YF9 867 aaKnown RBP14.05□□□□□ -0.16
SGSM3-209ENST00000478085 CCDC82Q8N4S0 544 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 WWC3Q9ULE0 1092 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 TPTE2Q6XPS3 522 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 RNF214Q8ND24 703 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 ZNF622Q969S3 477 aaKnown RBP eCLIP14.05□□□□□ -0.161e-7■□□□□ 10.4
SGSM3-209ENST00000478085 GOLGA6L19H0YKK7 550 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 SDF4Q9BRK5 362 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 WDR17Q8IZU2 1322 aa14.05□□□□□ -0.16
SGSM3-209ENST00000478085 ZNF213O14771 459 aa14.04□□□□□ -0.16
SGSM3-209ENST00000478085 XBP1P17861 261 aa14.04□□□□□ -0.16
SGSM3-209ENST00000478085 PES1O00541 588 aaKnown RBP14.04□□□□□ -0.16
SGSM3-209ENST00000478085 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
SGSM3-209ENST00000478085 HMGB2P26583 209 aaKnown RBP14.04□□□□□ -0.16
SGSM3-209ENST00000478085 USP5P45974 858 aa14.04□□□□□ -0.16
SGSM3-209ENST00000478085 ZSCAN31Q96LW9 406 aaPredicted RBP14.04□□□□□ -0.16
SGSM3-209ENST00000478085 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
SGSM3-209ENST00000478085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
SGSM3-209ENST00000478085 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
SGSM3-209ENST00000478085 WDR33Q9C0J8 1336 aaKnown RBP14.03□□□□□ -0.16
SGSM3-209ENST00000478085 AGLP35573 1532 aa14.03□□□□□ -0.16
SGSM3-209ENST00000478085 ADGRL3Q9HAR2 1447 aa14.03□□□□□ -0.16
SGSM3-209ENST00000478085 CCDC191Q8NCU4 936 aa14.03□□□□□ -0.16
SGSM3-209ENST00000478085 SLC4A8Q2Y0W8 1093 aa14.03□□□□□ -0.16
SGSM3-209ENST00000478085 ADAMTS13Q76LX8 1427 aa14.02□□□□□ -0.16
SGSM3-209ENST00000478085 KCNQ4P56696 695 aa14.02□□□□□ -0.16
SGSM3-209ENST00000478085 TRIM22Q8IYM9 498 aa14.02□□□□□ -0.16
SGSM3-209ENST00000478085 ABCC4O15439 1325 aa14.02□□□□□ -0.17
SGSM3-209ENST00000478085 MCM4P33991 863 aa14.02□□□□□ -0.17
SGSM3-209ENST00000478085 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
SGSM3-209ENST00000478085 ANKARQ7Z5J8 1434 aa14.02□□□□□ -0.17
SGSM3-209ENST00000478085 RANBP6O60518 1105 aaKnown RBP14.01□□□□□ -0.17
SGSM3-209ENST00000478085 CCT2P78371 535 aaKnown RBP14.01□□□□□ -0.17
SGSM3-209ENST00000478085 TRAPPC3LQ5T215 181 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 SLC9C2Q5TAH2 1124 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 NSFL1CQ9UNZ2 370 aaKnown RBP14.01□□□□□ -0.17
SGSM3-209ENST00000478085 TPD52L1Q16890 204 aaPredicted RBP14.01□□□□□ -0.17
SGSM3-209ENST00000478085 CCDC87Q9NVE4 849 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 LIMCH1Q9UPQ0 1083 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 NEXMIFQ5QGS0 1516 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 NEURL1BA8MQ27 555 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
SGSM3-209ENST00000478085 FAM43AQ8N2R8 423 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 DBNDD2Q9BQY9 259 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 LRRC2Q9BYS8 371 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 NDUFB9Q9Y6M9 179 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 CYP27B1O15528 508 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 PTPRMP28827 1452 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 STK38Q15208 465 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 ARHGEF40Q8TER5 1519 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 BRMS1Q9HCU9 246 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 TULP4Q9NRJ4 1543 aa14.01□□□□□ -0.17
SGSM3-209ENST00000478085 ITGA6P23229 1130 aa14□□□□□ -0.17
SGSM3-209ENST00000478085 RAB11FIP4Q86YS3 637 aa14□□□□□ -0.17
SGSM3-209ENST00000478085 SASS6Q6UVJ0 657 aa14□□□□□ -0.17
SGSM3-209ENST00000478085 MKNK2Q9HBH9 465 aa14□□□□□ -0.17
SGSM3-209ENST00000478085 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
SGSM3-209ENST00000478085 EYA2O00167 538 aa14□□□□□ -0.17
SGSM3-209ENST00000478085 TTF1Q15361 905 aaPredicted RBP14□□□□□ -0.17
SGSM3-209ENST00000478085 BEND3Q5T5X7 828 aa14□□□□□ -0.17
SGSM3-209ENST00000478085 JAG2Q9Y219 1238 aa14□□□□□ -0.17
SGSM3-209ENST00000478085 RBM8AQ9Y5S9 174 aaKnown RBP14□□□□□ -0.17
SGSM3-209ENST00000478085 ST5P78524 1137 aa13.99□□□□□ -0.17
SGSM3-209ENST00000478085 GUCY1B3Q02153 619 aa13.99□□□□□ -0.17
SGSM3-209ENST00000478085 NMIQ13287 307 aaPredicted RBP13.99□□□□□ -0.17
SGSM3-209ENST00000478085 PAG1Q9NWQ8 432 aa13.99□□□□□ -0.17
SGSM3-209ENST00000478085 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
SGSM3-209ENST00000478085 UQCRFS1P1P0C7P4 283 aa13.99□□□□□ -0.17
SGSM3-209ENST00000478085 RTL1A6NKG5 1358 aa13.99□□□□□ -0.17
SGSM3-209ENST00000478085 A0A1B0GUL7 405 aa13.99□□□□□ -0.17
SGSM3-209ENST00000478085 CHMLP26374 656 aa13.99□□□□□ -0.17
SGSM3-209ENST00000478085 ME1P48163 572 aa13.98□□□□□ -0.17
SGSM3-209ENST00000478085 KRT85P78386 507 aa13.98□□□□□ -0.17
SGSM3-209ENST00000478085 TCIRG1Q13488 830 aa13.98□□□□□ -0.17
SGSM3-209ENST00000478085 NEK1Q96PY6 1258 aa13.98□□□□□ -0.17
SGSM3-209ENST00000478085 TTC41PQ6P2S7 1318 aa13.98□□□□□ -0.17
SGSM3-209ENST00000478085 MBD3O95983 291 aa13.98□□□□□ -0.17
SGSM3-209ENST00000478085 SSFA2P28290 1259 aa13.98□□□□□ -0.17
SGSM3-209ENST00000478085 KIF24Q5T7B8 1368 aa13.98□□□□□ -0.17
SGSM3-209ENST00000478085 SETBP1Q9Y6X0 1596 aa13.97□□□□□ -0.17
SGSM3-209ENST00000478085 PIK3C2BO00750 1634 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms