RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 NBPF15Q8N660 670 aa10.88□□□□□ -0.67
ERCC8-205ENST00000477893 RUNDC1Q96C34 613 aa10.88□□□□□ -0.67
ERCC8-205ENST00000477893 FAM177BA6PVY3 158 aa10.87□□□□□ -0.67
ERCC8-205ENST00000477893 MYL6BP14649 208 aa10.87□□□□□ -0.67
ERCC8-205ENST00000477893 EIF4A1P60842 406 aaKnown RBP10.87□□□□□ -0.67
ERCC8-205ENST00000477893 LMOD3Q0VAK6 560 aa10.87□□□□□ -0.67
ERCC8-205ENST00000477893 ARHGAP27Q6ZUM4 889 aa10.87□□□□□ -0.67
ERCC8-205ENST00000477893 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
ERCC8-205ENST00000477893 LAMB4A4D0S4 1761 aa10.87□□□□□ -0.67
ERCC8-205ENST00000477893 AFDNP55196 1824 aaKnown RBP10.86□□□□□ -0.67
ERCC8-205ENST00000477893 ATP10DQ9P241 1426 aa10.86□□□□□ -0.67
ERCC8-205ENST00000477893 GIGYF1O75420 1035 aaPredicted RBP10.86□□□□□ -0.67
ERCC8-205ENST00000477893 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
ERCC8-205ENST00000477893 EIF2S2P20042 333 aaKnown RBP10.86□□□□□ -0.67
ERCC8-205ENST00000477893 KCNA3P22001 575 aa10.86□□□□□ -0.67
ERCC8-205ENST00000477893 CCDC184Q52MB2 194 aa10.86□□□□□ -0.67
ERCC8-205ENST00000477893 C2CD5Q86YS7 1000 aa10.86□□□□□ -0.67
ERCC8-205ENST00000477893 SETDB2Q96T68 719 aa10.86□□□□□ -0.67
ERCC8-205ENST00000477893 PIM2Q9P1W9 311 aa10.86□□□□□ -0.67
ERCC8-205ENST00000477893 BCORQ6W2J9 1755 aa10.85□□□□□ -0.67
ERCC8-205ENST00000477893 PSEN1P49768 467 aa10.85□□□□□ -0.67
ERCC8-205ENST00000477893 DALRD3Q5D0E6 543 aaKnown RBP10.85□□□□□ -0.67
ERCC8-205ENST00000477893 PRR5LQ6MZQ0 368 aa10.85□□□□□ -0.67
ERCC8-205ENST00000477893 CNBD1Q8NA66 436 aa10.85□□□□□ -0.67
ERCC8-205ENST00000477893 ANXA1P04083 346 aa10.84□□□□□ -0.67
ERCC8-205ENST00000477893 KRT24Q2M2I5 525 aa10.84□□□□□ -0.67
ERCC8-205ENST00000477893 NIP7Q9Y221 180 aaKnown RBP eCLIP10.84□□□□□ -0.67
ERCC8-205ENST00000477893 ZNF652Q9Y2D9 606 aa10.84□□□□□ -0.67
ERCC8-205ENST00000477893 NRXN2Q9P2S2 1712 aa10.84□□□□□ -0.67
ERCC8-205ENST00000477893 APAF1O14727 1248 aa10.83□□□□□ -0.68
ERCC8-205ENST00000477893 ANP32CO43423 234 aa10.83□□□□□ -0.68
ERCC8-205ENST00000477893 ST5P78524 1137 aa10.83□□□□□ -0.68
ERCC8-205ENST00000477893 HLFQ16534 295 aa10.83□□□□□ -0.68
ERCC8-205ENST00000477893 KIF6Q6ZMV9 814 aa10.83□□□□□ -0.68
ERCC8-205ENST00000477893 TTLL7Q6ZT98 887 aa10.83□□□□□ -0.68
ERCC8-205ENST00000477893 NBPF5PQ86XG9 351 aaPredicted RBP10.83□□□□□ -0.68
ERCC8-205ENST00000477893 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
ERCC8-205ENST00000477893 ZNF622Q969S3 477 aaKnown RBP eCLIP10.83□□□□□ -0.68
ERCC8-205ENST00000477893 RNF166Q96A37 237 aaPredicted RBP10.83□□□□□ -0.68
ERCC8-205ENST00000477893 ZBTB3Q9H5J0 574 aa10.83□□□□□ -0.68
ERCC8-205ENST00000477893 BRCA1P38398 1863 aaKnown RBP10.83□□□□□ -0.68
ERCC8-205ENST00000477893 H0YIN7 160 aa10.82□□□□□ -0.68
ERCC8-205ENST00000477893 GPTP24298 496 aa10.82□□□□□ -0.68
ERCC8-205ENST00000477893 RASSF7Q02833 373 aa10.82□□□□□ -0.68
ERCC8-205ENST00000477893 PROSER3Q2NL68 480 aa10.82□□□□□ -0.68
ERCC8-205ENST00000477893 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
ERCC8-205ENST00000477893 COL11A2P13942 1736 aaPredicted RBP10.81□□□□□ -0.68
ERCC8-205ENST00000477893 ADCY9O60503 1353 aa10.81□□□□□ -0.68
ERCC8-205ENST00000477893 GPBP1L1Q9HC44 474 aaPredicted RBP10.81□□□□□ -0.68
ERCC8-205ENST00000477893 ANKRD31Q8N7Z5 1873 aa10.81□□□□□ -0.68
ERCC8-205ENST00000477893 G3V3G9 751 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
ERCC8-205ENST00000477893 GTF2E1P29083 439 aaPredicted RBP10.8□□□□□ -0.68
ERCC8-205ENST00000477893 PDE6BP35913 854 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 AIMP1Q12904 312 aaKnown RBP10.8□□□□□ -0.68
ERCC8-205ENST00000477893 GSE1Q14687 1217 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 C9orf131Q5VYM1 1079 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 TTLL6Q8N841 843 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 ZNF428Q96B54 188 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 BRIP1Q9BX63 1249 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 RNF181Q9P0P0 153 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 MAP3K15Q6ZN16 1313 aa10.8□□□□□ -0.68
ERCC8-205ENST00000477893 CHL1O00533 1208 aa10.79□□□□□ -0.68
ERCC8-205ENST00000477893 CLEC4GQ6UXB4 293 aa10.79□□□□□ -0.68
ERCC8-205ENST00000477893 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
ERCC8-205ENST00000477893 MBIPQ9NS73 344 aa10.79□□□□□ -0.68
ERCC8-205ENST00000477893 DLEC1Q9Y238 1755 aa10.79□□□□□ -0.68
ERCC8-205ENST00000477893 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
ERCC8-205ENST00000477893 C21orf2O43822 256 aa10.78□□□□□ -0.68
ERCC8-205ENST00000477893 HDGFL1Q5TGJ6 251 aa10.78□□□□□ -0.68
ERCC8-205ENST00000477893 XAGE3Q8WTP9 111 aa10.78□□□□□ -0.68
ERCC8-205ENST00000477893 BABAM1Q9NWV8 329 aa10.78□□□□□ -0.68
ERCC8-205ENST00000477893 CHPF2Q9P2E5 772 aa10.78□□□□□ -0.68
ERCC8-205ENST00000477893 BOLA1Q9Y3E2 137 aa10.78□□□□□ -0.68
ERCC8-205ENST00000477893 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
ERCC8-205ENST00000477893 ABCC12Q96J65 1359 aa10.77□□□□□ -0.68
ERCC8-205ENST00000477893 TNRC6CQ9HCJ0 1690 aaKnown RBP10.77□□□□□ -0.69
ERCC8-205ENST00000477893 ELL2O00472 640 aaPredicted RBP10.77□□□□□ -0.69
ERCC8-205ENST00000477893 PDIA6Q15084 440 aa10.77□□□□□ -0.69
ERCC8-205ENST00000477893 ERFEQ4G0M1 354 aa10.77□□□□□ -0.69
ERCC8-205ENST00000477893 PRPF40BQ6NWY9 871 aaKnown RBP10.77□□□□□ -0.69
ERCC8-205ENST00000477893 TPTE2Q6XPS3 522 aa10.77□□□□□ -0.69
ERCC8-205ENST00000477893 CFAP44Q96MT7 982 aa10.77□□□□□ -0.69
ERCC8-205ENST00000477893 ERBB4Q15303 1308 aa10.77□□□□□ -0.69
ERCC8-205ENST00000477893 UBN2Q6ZU65 1347 aa10.77□□□□□ -0.69
ERCC8-205ENST00000477893 CACNA1SQ13698 1873 aa10.76□□□□□ -0.69
ERCC8-205ENST00000477893 ERVV-1B6SEH8 477 aa10.76□□□□□ -0.69
ERCC8-205ENST00000477893 C1QTNF8P60827 252 aa10.76□□□□□ -0.69
ERCC8-205ENST00000477893 DUSP27Q5VZP5 1158 aa10.76□□□□□ -0.69
ERCC8-205ENST00000477893 COPS6Q7L5N1 327 aa10.76□□□□□ -0.69
ERCC8-205ENST00000477893 TSR2Q969E8 191 aaKnown RBP10.76□□□□□ -0.69
ERCC8-205ENST00000477893 NFKBIEO00221 500 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 SRGNP10124 158 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 CHRM1P11229 460 aaPredicted RBP10.75□□□□□ -0.69
ERCC8-205ENST00000477893 PRELPP51888 382 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 GNAI1P63096 354 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
ERCC8-205ENST00000477893 SUSD4Q5VX71 490 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 STYK1Q6J9G0 422 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 OLFM4Q6UX06 510 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms