RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SLC16A10Q8TF71 515 aa20.44■□□□□ 0.86
VHL-203ENST00000477538 SETDB2Q96T68 719 aa20.44■□□□□ 0.86
VHL-203ENST00000477538 CWC25Q9NXE8 425 aaPredicted RBP20.44■□□□□ 0.86
VHL-203ENST00000477538 IBTKQ9P2D0 1353 aaPredicted RBP20.44■□□□□ 0.86
VHL-203ENST00000477538 GCKRQ14397 625 aa20.43■□□□□ 0.86
VHL-203ENST00000477538 NFIXQ14938 502 aa20.43■□□□□ 0.86
VHL-203ENST00000477538 MSL1Q68DK7 614 aa20.43■□□□□ 0.86
VHL-203ENST00000477538 CARMIL3Q8ND23 1372 aa20.43■□□□□ 0.86
VHL-203ENST00000477538 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
VHL-203ENST00000477538 DDX19BQ9UMR2 479 aa20.42■□□□□ 0.86
VHL-203ENST00000477538 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
VHL-203ENST00000477538 TM4SF1P30408 202 aa20.41■□□□□ 0.86
VHL-203ENST00000477538 PPP1R42Q7Z4L9 355 aa20.41■□□□□ 0.86
VHL-203ENST00000477538 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
VHL-203ENST00000477538 NEFLP07196 543 aa20.4■□□□□ 0.86
VHL-203ENST00000477538 SUSD4Q5VX71 490 aa20.4■□□□□ 0.86
VHL-203ENST00000477538 C9orf78Q9NZ63 289 aaPredicted RBP20.4■□□□□ 0.86
VHL-203ENST00000477538 GRM8O00222 908 aa20.39■□□□□ 0.85
VHL-203ENST00000477538 UTP14AQ9BVJ6 771 aaKnown RBP20.39■□□□□ 0.85
VHL-203ENST00000477538 USP44Q9H0E7 712 aa20.39■□□□□ 0.85
VHL-203ENST00000477538 TRMT112Q9UI30 125 aaKnown RBP20.39■□□□□ 0.85
VHL-203ENST00000477538 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
VHL-203ENST00000477538 ZBTB7AO95365 584 aa20.38■□□□□ 0.85
VHL-203ENST00000477538 NTSR2O95665 410 aa20.38■□□□□ 0.85
VHL-203ENST00000477538 PCCAP05165 728 aaPredicted RBP20.38■□□□□ 0.85
VHL-203ENST00000477538 MMP10P09238 476 aa20.38■□□□□ 0.85
VHL-203ENST00000477538 DDR1Q08345 913 aa20.38■□□□□ 0.85
VHL-203ENST00000477538 NBPF5PQ86XG9 351 aaPredicted RBP20.38■□□□□ 0.85
VHL-203ENST00000477538 MEIS3Q99687 375 aa20.38■□□□□ 0.85
VHL-203ENST00000477538 NYXQ9GZU5 481 aa20.38■□□□□ 0.85
VHL-203ENST00000477538 KIF13BQ9NQT8 1826 aa20.37■□□□□ 0.85
VHL-203ENST00000477538 UTYO14607 1347 aa20.37■□□□□ 0.85
VHL-203ENST00000477538 H7C1W4 665 aa20.37■□□□□ 0.85
VHL-203ENST00000477538 ZBTB7BO15156 539 aaPredicted RBP20.37■□□□□ 0.85
VHL-203ENST00000477538 UBE3BQ7Z3V4 1068 aa20.37■□□□□ 0.85
VHL-203ENST00000477538 ZBTB38Q8NAP3 1195 aaPredicted RBP20.37■□□□□ 0.85
VHL-203ENST00000477538 MTFR1LQ9H019 292 aa20.37■□□□□ 0.85
VHL-203ENST00000477538 CHMP4BQ9H444 224 aaKnown RBP20.37■□□□□ 0.85
VHL-203ENST00000477538 TNRC6CQ9HCJ0 1690 aaKnown RBP20.37■□□□□ 0.85
VHL-203ENST00000477538 SH3TC1Q8TE82 1336 aa20.36■□□□□ 0.85
VHL-203ENST00000477538 SERPINB2P05120 415 aa20.36■□□□□ 0.85
VHL-203ENST00000477538 GNAI3P08754 354 aa20.36■□□□□ 0.85
VHL-203ENST00000477538 NBPF7P0C2Y1 421 aaPredicted RBP20.36■□□□□ 0.85
VHL-203ENST00000477538 UBTFL1P0CB47 393 aaPredicted RBP20.36■□□□□ 0.85
VHL-203ENST00000477538 RTL5Q5HYW3 569 aaPredicted RBP20.36■□□□□ 0.85
VHL-203ENST00000477538 EXOC6Q8TAG9 804 aa20.36■□□□□ 0.85
VHL-203ENST00000477538 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
VHL-203ENST00000477538 FAM89AQ96GI7 184 aa20.36■□□□□ 0.85
VHL-203ENST00000477538 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
VHL-203ENST00000477538 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
VHL-203ENST00000477538 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
VHL-203ENST00000477538 CNBD1Q8NA66 436 aa20.35■□□□□ 0.85
VHL-203ENST00000477538 CDHR2Q9BYE9 1310 aa20.34■□□□□ 0.85
VHL-203ENST00000477538 NPHP1O15259 732 aa20.34■□□□□ 0.85
VHL-203ENST00000477538 GTF2E1P29083 439 aaPredicted RBP20.34■□□□□ 0.85
VHL-203ENST00000477538 CASP7P55210 303 aa20.34■□□□□ 0.85
VHL-203ENST00000477538 ATF5Q9Y2D1 282 aaPredicted RBP20.34■□□□□ 0.85
VHL-203ENST00000477538 TAF1P21675 1872 aa20.34■□□□□ 0.85
VHL-203ENST00000477538 CACNA1SQ13698 1873 aa20.34■□□□□ 0.85
VHL-203ENST00000477538 SPEF2Q9C093 1822 aa20.34■□□□□ 0.85
VHL-203ENST00000477538 ERFEQ4G0M1 354 aa20.33■□□□□ 0.85
VHL-203ENST00000477538 PRR5LQ6MZQ0 368 aa20.33■□□□□ 0.85
VHL-203ENST00000477538 SYNE4Q8N205 404 aa20.33■□□□□ 0.85
VHL-203ENST00000477538 ZBTB40Q9NUA8 1239 aa20.33■□□□□ 0.85
VHL-203ENST00000477538 ABCC12Q96J65 1359 aa20.33■□□□□ 0.84
VHL-203ENST00000477538 SUCLG2Q96I99 432 aa20.32■□□□□ 0.84
VHL-203ENST00000477538 HDAC5Q9UQL6 1122 aa20.32■□□□□ 0.84
VHL-203ENST00000477538 COL11A2P13942 1736 aaPredicted RBP20.31■□□□□ 0.84
VHL-203ENST00000477538 RIC1Q4ADV7 1423 aa20.31■□□□□ 0.84
VHL-203ENST00000477538 IRS4O14654 1257 aaPredicted RBP20.31■□□□□ 0.84
VHL-203ENST00000477538 GNAI2P04899 355 aa20.31■□□□□ 0.84
VHL-203ENST00000477538 POLD1P28340 1107 aa20.31■□□□□ 0.84
VHL-203ENST00000477538 ST5P78524 1137 aa20.31■□□□□ 0.84
VHL-203ENST00000477538 CCDC24Q8N4L8 307 aa20.3■□□□□ 0.84
VHL-203ENST00000477538 C1orf115Q9H7X2 142 aa20.3■□□□□ 0.84
VHL-203ENST00000477538 LRRFIP2Q9Y608 721 aaKnown RBP20.3■□□□□ 0.84
VHL-203ENST00000477538 DLEC1Q9Y238 1755 aa20.3■□□□□ 0.84
VHL-203ENST00000477538 HCLS1P14317 486 aaPredicted RBP20.29■□□□□ 0.84
VHL-203ENST00000477538 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
VHL-203ENST00000477538 AAMPQ13685 434 aa20.29■□□□□ 0.84
VHL-203ENST00000477538 KAZALD1Q96I82 304 aa20.29■□□□□ 0.84
VHL-203ENST00000477538 PLA2G12BQ9BX93 195 aa20.29■□□□□ 0.84
VHL-203ENST00000477538 PDE8AO60658 829 aa20.28■□□□□ 0.84
VHL-203ENST00000477538 SLC10A5Q5PT55 438 aa20.28■□□□□ 0.84
VHL-203ENST00000477538 BICC1Q9H694 974 aaKnown RBP20.28■□□□□ 0.84
VHL-203ENST00000477538 EPHA10Q5JZY3 1008 aa20.27■□□□□ 0.84
VHL-203ENST00000477538 SGIP1Q9BQI5 828 aa20.27■□□□□ 0.84
VHL-203ENST00000477538 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.83
VHL-203ENST00000477538 C10orf71Q711Q0 1435 aa20.27■□□□□ 0.83
VHL-203ENST00000477538 PTGER2P43116 358 aa20.26■□□□□ 0.83
VHL-203ENST00000477538 FOXO4P98177 505 aa20.26■□□□□ 0.83
VHL-203ENST00000477538 SPON1Q9HCB6 807 aa20.26■□□□□ 0.83
VHL-203ENST00000477538 CTSWP56202 376 aa20.25■□□□□ 0.83
VHL-203ENST00000477538 ANKRD44Q8N8A2 993 aa20.25■□□□□ 0.83
VHL-203ENST00000477538 RABL6Q3YEC7 729 aaPredicted RBP20.24■□□□□ 0.83
VHL-203ENST00000477538 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
VHL-203ENST00000477538 BRIP1Q9BX63 1249 aa20.24■□□□□ 0.83
VHL-203ENST00000477538 BRCA1P38398 1863 aaKnown RBP20.24■□□□□ 0.83
VHL-203ENST00000477538 CEP85Q6P2H3 762 aa20.23■□□□□ 0.83
VHL-203ENST00000477538 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms