RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 COPRSQ9NQ92 184 aa5.52□□□□□ -1.53
RGPD5-209ENST00000477523 RFC4P35249 363 aa5.52□□□□□ -1.53
RGPD5-209ENST00000477523 ROBO1Q9Y6N7 1651 aa5.52□□□□□ -1.53
RGPD5-209ENST00000477523 PHF14O94880 888 aa5.52□□□□□ -1.53
RGPD5-209ENST00000477523 NBPF5PQ86XG9 351 aaPredicted RBP5.52□□□□□ -1.53
RGPD5-209ENST00000477523 ALS2Q96Q42 1657 aa5.52□□□□□ -1.53
RGPD5-209ENST00000477523 TRIM28Q13263 835 aaKnown RBP5.52□□□□□ -1.53
RGPD5-209ENST00000477523 RGPD1P0DJD0 1748 aa5.52□□□□□ -1.53
RGPD5-209ENST00000477523 AOX1Q06278 1338 aa5.52□□□□□ -1.53
RGPD5-209ENST00000477523 ST18O60284 1047 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 MAP4K4O95819 1239 aaPredicted RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 EIF5P55010 431 aaKnown RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 RBM6P78332 1123 aaKnown RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 FRAT2O75474 233 aaPredicted RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 SF3B2Q13435 895 aaKnown RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 TRAPPC3LQ5T215 181 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 SLIT2O94813 1529 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 STRCP1A6NGW2 1772 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 DISP2A7MBM2 1401 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 ZKSCAN1P17029 563 aaPredicted RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 CCDC152Q4G0S7 254 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 ZBTB38Q8NAP3 1195 aaPredicted RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 SETDB2Q96T68 719 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 ISCA1Q9BUE6 129 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 PDE8AO60658 829 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 SLC4A3P48751 1232 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 EPHA10Q5JZY3 1008 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 TMX4Q9H1E5 349 aaPredicted RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 BOLA2Q9H3K6 86 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 KCNQ4P56696 695 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 TFCP2Q12800 502 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 TTC39AQ5SRH9 613 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 TPTE2Q6XPS3 522 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 CDC5LQ99459 802 aaKnown RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 SLKQ9H2G2 1235 aaPredicted RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 USP54Q70EL1 1684 aa5.51□□□□□ -1.53
RGPD5-209ENST00000477523 BCL11BQ9C0K0 894 aaPredicted RBP5.51□□□□□ -1.53
RGPD5-209ENST00000477523 NLRP10Q86W26 655 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 EVI5LQ96CN4 794 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 OSBPL3Q9H4L5 887 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 RXRBP28702 533 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 FGD1P98174 961 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 RABEP1Q15276 862 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 TBC1D32Q96NH3 1257 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 RPS6KA4O75676 772 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 HCLS1P14317 486 aaPredicted RBP5.5□□□□□ -1.53
RGPD5-209ENST00000477523 ITGA6P23229 1130 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 ATP2B3Q16720 1220 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 TNNI3KQ59H18 835 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 USPL1Q5W0Q7 1092 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 VPS37DQ86XT2 251 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 EAF2Q96CJ1 260 aaPredicted RBP5.5□□□□□ -1.53
RGPD5-209ENST00000477523 NYXQ9GZU5 481 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 FBXO3Q9UK99 471 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 FPGT-TNNI3KV9GXZ4 949 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 IFIT1P09914 478 aaKnown RBP5.5□□□□□ -1.53
RGPD5-209ENST00000477523 GSPT1P15170 499 aaKnown RBP5.5□□□□□ -1.53
RGPD5-209ENST00000477523 HLFQ16534 295 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 RNF20Q5VTR2 975 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 NLRP3Q96P20 1036 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 UTYO14607 1347 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 PTPN12Q05209 780 aaKnown RBP5.5□□□□□ -1.53
RGPD5-209ENST00000477523 ITPK1Q13572 414 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 CWC27Q6UX04 472 aaKnown RBP5.5□□□□□ -1.53
RGPD5-209ENST00000477523 CLEC4GQ6UXB4 293 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 SPRYD3Q8NCJ5 442 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 STAP2Q9UGK3 403 aa5.5□□□□□ -1.53
RGPD5-209ENST00000477523 SEC24BO95487 1268 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 SLC4A9Q96Q91 983 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 TFCP2L1Q9NZI6 479 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 CDHR2Q9BYE9 1310 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 COL15A1P39059 1388 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 PHRF1Q9P1Y6 1649 aaKnown RBP5.49□□□□□ -1.53
RGPD5-209ENST00000477523 BCL9LQ86UU0 1499 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 WASHC4Q2M389 1173 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 RABL6Q3YEC7 729 aaPredicted RBP5.49□□□□□ -1.53
RGPD5-209ENST00000477523 ZNF594Q96JF6 807 aaPredicted RBP5.49□□□□□ -1.53
RGPD5-209ENST00000477523 DBNDD2Q9BQY9 259 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 TRIM37O94972 964 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 GNL3LQ9NVN8 582 aaKnown RBP5.49□□□□□ -1.53
RGPD5-209ENST00000477523 FKBP4Q02790 459 aaKnown RBP eCLIP5.49□□□□□ -1.53
RGPD5-209ENST00000477523 MRC1P22897 1456 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 LTN1O94822 1766 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 LMO7Q8WWI1 1683 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 APBA3O96018 575 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 SLC5A1P13866 664 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 ANKRD18AQ8IVF6 992 aa5.49□□□□□ -1.53
RGPD5-209ENST00000477523 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.48□□□□□ -1.53
RGPD5-209ENST00000477523 CTSWP56202 376 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 DDX46Q7L014 1031 aaKnown RBP5.48□□□□□ -1.53
RGPD5-209ENST00000477523 ESYT1Q9BSJ8 1104 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 SASH1O94885 1247 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 CHMLP26374 656 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 CNBD1Q8NA66 436 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 GPR108Q9NPR9 543 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 NARFQ9UHQ1 456 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 COL14A1Q05707 1796 aaKnown RBP5.48□□□□□ -1.53
RGPD5-209ENST00000477523 CNTNAP4Q9C0A0 1308 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 NBR1Q14596 966 aa5.48□□□□□ -1.53
RGPD5-209ENST00000477523 LRP10Q7Z4F1 713 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms