RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 ZNF790Q6PG37 636 aa8.32□□□□□ -1.08
LDB3-206ENST00000477489 DEFB132Q7Z7B7 95 aa8.32□□□□□ -1.08
LDB3-206ENST00000477489 ZCRB1Q8TBF4 217 aaKnown RBP8.32□□□□□ -1.08
LDB3-206ENST00000477489 DDRGK1Q96HY6 314 aa8.32□□□□□ -1.08
LDB3-206ENST00000477489 BCL9LQ86UU0 1499 aa8.32□□□□□ -1.08
LDB3-206ENST00000477489 DISP2A7MBM2 1401 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 CYP27B1O15528 508 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 ADAMTS2O95450 1211 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 RGS3P49796 1198 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 EVA1CP58658 441 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 CEP85Q6P2H3 762 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 CHD1LQ86WJ1 897 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 TTC5Q8N0Z6 440 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 FMNL2Q96PY5 1086 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 SRCIN1Q9C0H9 1055 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 DDX21Q9NR30 783 aaKnown RBP eCLIP8.31□□□□□ -1.08
LDB3-206ENST00000477489 USP21Q9UK80 565 aa8.31□□□□□ -1.08
LDB3-206ENST00000477489 TRPC5Q9UL62 973 aaPredicted RBP8.31□□□□□ -1.08
LDB3-206ENST00000477489 THRAP3Q9Y2W1 955 aaKnown RBP8.31□□□□□ -1.08
LDB3-206ENST00000477489 ATRNO75882 1429 aa8.3□□□□□ -1.08
LDB3-206ENST00000477489 TNS2Q63HR2 1409 aa8.3□□□□□ -1.08
LDB3-206ENST00000477489 NRAPQ86VF7 1730 aa8.3□□□□□ -1.08
LDB3-206ENST00000477489 SNRPA1P09661 255 aaKnown RBP8.3□□□□□ -1.08
LDB3-206ENST00000477489 BMP2KLQ5H9B9 411 aa8.3□□□□□ -1.08
LDB3-206ENST00000477489 G2E3Q7L622 706 aa8.3□□□□□ -1.08
LDB3-206ENST00000477489 DNAAF4Q8WXU2 420 aa8.3□□□□□ -1.08
LDB3-206ENST00000477489 IPO9Q96P70 1041 aaKnown RBP8.3□□□□□ -1.08
LDB3-206ENST00000477489 UPF2Q9HAU5 1272 aaKnown RBP8.3□□□□□ -1.08
LDB3-206ENST00000477489 BRWD3Q6RI45 1802 aa8.3□□□□□ -1.08
LDB3-206ENST00000477489 C5P01031 1676 aa8.3□□□□□ -1.08
LDB3-206ENST00000477489 CABP4P57796 275 aa8.29□□□□□ -1.08
LDB3-206ENST00000477489 KSR2Q6VAB6 950 aa8.29□□□□□ -1.08
LDB3-206ENST00000477489 SIRT2Q8IXJ6 389 aa8.29□□□□□ -1.08
LDB3-206ENST00000477489 CHPF2Q9P2E5 772 aa8.29□□□□□ -1.08
LDB3-206ENST00000477489 GLI3P10071 1580 aa8.29□□□□□ -1.08
LDB3-206ENST00000477489 COL15A1P39059 1388 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 UBTFL1P0CB47 393 aaPredicted RBP8.28□□□□□ -1.08
LDB3-206ENST00000477489 PSEN2P49810 448 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 ATP8B2P98198 1209 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 MTX1Q13505 466 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 HSP90AB4PQ58FF6 505 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 SLC4A10Q6U841 1118 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 NFATC2IPQ8NCF5 419 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 LINS1Q8NG48 757 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 MEIS3Q99687 375 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 TEX13AQ9BXU3 409 aaPredicted RBP8.28□□□□□ -1.08
LDB3-206ENST00000477489 CICQ96RK0 1608 aaPredicted RBP8.28□□□□□ -1.08
LDB3-206ENST00000477489 UTYO14607 1347 aa8.28□□□□□ -1.08
LDB3-206ENST00000477489 ADCY9O60503 1353 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 EVI5O60447 810 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 EIF2S2P20042 333 aaKnown RBP8.27□□□□□ -1.09
LDB3-206ENST00000477489 BEND3Q5T5X7 828 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 ANKRD45Q5TZF3 282 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 DMRTA1Q5VZB9 504 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
LDB3-206ENST00000477489 ADGRD1Q6QNK2 874 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 ZNF454Q8N9F8 522 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 OSBPL3Q9H4L5 887 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 ANO8Q9HCE9 1232 aaPredicted RBP8.27□□□□□ -1.09
LDB3-206ENST00000477489 KCPQ6ZWJ8 1503 aa8.27□□□□□ -1.09
LDB3-206ENST00000477489 TOGARAM1Q9Y4F4 1720 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 SLIT2O94813 1529 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 PI4KAP2A4QPH2 592 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 F6X3S4 739 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 KCNQ3O43525 872 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 MAP3K9P80192 1104 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 NEXNQ0ZGT2 675 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 SF3B2Q13435 895 aaKnown RBP8.26□□□□□ -1.09
LDB3-206ENST00000477489 FNBP4Q8N3X1 1017 aaPredicted RBP8.26□□□□□ -1.09
LDB3-206ENST00000477489 PI4KAP1Q8N8J0 262 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 IL27Q8NEV9 243 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 SSH3Q8TE77 659 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 ZNF496Q96IT1 587 aaPredicted RBP8.26□□□□□ -1.09
LDB3-206ENST00000477489 USP44Q9H0E7 712 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 C1orf115Q9H7X2 142 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 EMILIN3Q9NT22 766 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 BTG4Q9NY30 223 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
LDB3-206ENST00000477489 ITGB4P16144 1822 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 AOX1Q06278 1338 aa8.26□□□□□ -1.09
LDB3-206ENST00000477489 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.26□□□□□ -1.09
LDB3-206ENST00000477489 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
LDB3-206ENST00000477489 ZNF831Q5JPB2 1677 aa8.25□□□□□ -1.09
LDB3-206ENST00000477489 TK2O00142 265 aa8.25□□□□□ -1.09
LDB3-206ENST00000477489 FOSBP53539 338 aa8.25□□□□□ -1.09
LDB3-206ENST00000477489 PDIA6Q15084 440 aa8.25□□□□□ -1.09
LDB3-206ENST00000477489 SPRYD3Q8NCJ5 442 aa8.25□□□□□ -1.09
LDB3-206ENST00000477489 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
LDB3-206ENST00000477489 LNPKQ9C0E8 428 aa8.25□□□□□ -1.09
LDB3-206ENST00000477489 PHAXQ9H814 394 aaKnown RBP8.25□□□□□ -1.09
LDB3-206ENST00000477489 NUP188Q5SRE5 1749 aa8.24□□□□□ -1.09
LDB3-206ENST00000477489 BARGINQ6ZT62 677 aa8.24□□□□□ -1.09
LDB3-206ENST00000477489 ERC1Q8IUD2 1116 aa8.24□□□□□ -1.09
LDB3-206ENST00000477489 METTL22Q9BUU2 404 aaPredicted RBP8.24□□□□□ -1.09
LDB3-206ENST00000477489 LRRCC1Q9C099 1032 aa8.24□□□□□ -1.09
LDB3-206ENST00000477489 STRN4Q9NRL3 753 aa8.24□□□□□ -1.09
LDB3-206ENST00000477489 EXOC5O00471 708 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 EPB41L2O43491 1005 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms