RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
BRCA1-213ENST00000476777 LMOD1P29536 600 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-213ENST00000476777 EPS15P42566 896 aa15.24■□□□□ 0.03
BRCA1-213ENST00000476777 SCNN1DP51172 638 aa15.24■□□□□ 0.03
BRCA1-213ENST00000476777 EIF6P56537 245 aaKnown RBP15.24■□□□□ 0.03
BRCA1-213ENST00000476777 THSD7BQ9C0I4 1608 aa15.24■□□□□ 0.03
BRCA1-213ENST00000476777 ABCC12Q96J65 1359 aa15.24■□□□□ 0.03
BRCA1-213ENST00000476777 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-213ENST00000476777 ECE1P42892 770 aa15.23■□□□□ 0.03
BRCA1-213ENST00000476777 RGS19P49795 217 aa15.23■□□□□ 0.03
BRCA1-213ENST00000476777 CST9Q5W186 159 aa15.23■□□□□ 0.03
BRCA1-213ENST00000476777 CC2D2BQ6DHV5 1058 aa15.23■□□□□ 0.03
BRCA1-213ENST00000476777 CYP4F22Q6NT55 531 aa15.23■□□□□ 0.03
BRCA1-213ENST00000476777 MCM10Q7L590 875 aa15.23■□□□□ 0.03
BRCA1-213ENST00000476777 GPR101Q96P66 508 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-213ENST00000476777 BEGAINQ9BUH8 593 aa15.23■□□□□ 0.03
BRCA1-213ENST00000476777 CCDC85CA6NKD9 419 aa15.22■□□□□ 0.03
BRCA1-213ENST00000476777 TRAF5O00463 557 aa15.22■□□□□ 0.03
BRCA1-213ENST00000476777 MLLT1Q03111 559 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-213ENST00000476777 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-213ENST00000476777 NUTM1Q86Y26 1132 aa15.22■□□□□ 0.03
BRCA1-213ENST00000476777 TRPM7Q96QT4 1865 aa15.22■□□□□ 0.03
BRCA1-213ENST00000476777 TNRC18O15417 2968 aaPredicted RBP15.21■□□□□ 0.03
BRCA1-213ENST00000476777 HOXA10P31260 410 aaPredicted RBP15.21■□□□□ 0.03
BRCA1-213ENST00000476777 GRM1Q13255 1194 aa15.21■□□□□ 0.03
BRCA1-213ENST00000476777 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.03
BRCA1-213ENST00000476777 USP50Q70EL3 339 aaPredicted RBP15.21■□□□□ 0.03
BRCA1-213ENST00000476777 LARGE2Q8N3Y3 721 aa15.21■□□□□ 0.03
BRCA1-213ENST00000476777 RTF1Q92541 710 aaKnown RBP15.21■□□□□ 0.03
BRCA1-213ENST00000476777 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
BRCA1-213ENST00000476777 TLL2Q9Y6L7 1015 aa15.21■□□□□ 0.03
BRCA1-213ENST00000476777 DCTN1Q14203 1278 aa15.2■□□□□ 0.02
BRCA1-213ENST00000476777 GRIPAP1Q4V328 841 aa15.2■□□□□ 0.02
BRCA1-213ENST00000476777 SLC51AQ86UW1 340 aa15.2■□□□□ 0.02
BRCA1-213ENST00000476777 TSKSQ9UJT2 592 aa15.2■□□□□ 0.02
BRCA1-213ENST00000476777 ERVV-1B6SEH8 477 aa15.19■□□□□ 0.02
BRCA1-213ENST00000476777 AOC2O75106 756 aa15.19■□□□□ 0.02
BRCA1-213ENST00000476777 MAP2K2P36507 400 aa15.19■□□□□ 0.02
BRCA1-213ENST00000476777 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
BRCA1-213ENST00000476777 RPGRQ92834 1020 aaKnown RBP15.19■□□□□ 0.02
BRCA1-213ENST00000476777 CASP8AP2Q9UKL3 1982 aa15.18■□□□□ 0.02
BRCA1-213ENST00000476777 NUP98P52948 1817 aa15.18■□□□□ 0.02
BRCA1-213ENST00000476777 CRAMP1Q96RY5 1269 aa15.18■□□□□ 0.02
BRCA1-213ENST00000476777 RIC1Q4ADV7 1423 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 HTATSF1O43719 755 aaKnown RBP15.17■□□□□ 0.02
BRCA1-213ENST00000476777 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-213ENST00000476777 SAPCD2Q86UD0 394 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 NIM1KQ8IY84 436 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 NGEFQ8N5V2 710 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 GPRC5DQ9NZD1 345 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
BRCA1-213ENST00000476777 IBTKQ9P2D0 1353 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-213ENST00000476777 PPEF1O14829 653 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-213ENST00000476777 U2AF1L5P0DN76 240 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-213ENST00000476777 U2AF1Q01081 240 aaKnown RBP eCLIP15.16■□□□□ 0.02
BRCA1-213ENST00000476777 SUSD4Q5VX71 490 aa15.16■□□□□ 0.02
BRCA1-213ENST00000476777 TTLL7Q6ZT98 887 aa15.16■□□□□ 0.02
BRCA1-213ENST00000476777 RBM17Q96I25 401 aaKnown RBP15.16■□□□□ 0.02
BRCA1-213ENST00000476777 ADARB2Q9NS39 739 aaKnown RBP15.16■□□□□ 0.02
BRCA1-213ENST00000476777 NUDCQ9Y266 331 aa15.16■□□□□ 0.02
BRCA1-213ENST00000476777 TCERG1O14776 1098 aaKnown RBP15.15■□□□□ 0.02
BRCA1-213ENST00000476777 PPIP5K2O43314 1243 aa15.15■□□□□ 0.02
BRCA1-213ENST00000476777 CA12O43570 354 aa15.15■□□□□ 0.02
BRCA1-213ENST00000476777 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
BRCA1-213ENST00000476777 CELF2O95319 508 aaKnown RBP15.15■□□□□ 0.02
BRCA1-213ENST00000476777 GPTP24298 496 aa15.15■□□□□ 0.02
BRCA1-213ENST00000476777 C3orf67Q6ZVT6 689 aa15.15■□□□□ 0.02
BRCA1-213ENST00000476777 MCOLN1Q9GZU1 580 aa15.15■□□□□ 0.02
BRCA1-213ENST00000476777 LAMB4A4D0S4 1761 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 NTSR2O95665 410 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 CXCL9Q07325 125 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 AOC3Q16853 763 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 KIF6Q6ZMV9 814 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 ZNF34Q8IZ26 560 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 HHIPL1Q96JK4 782 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 VPS33BQ9H267 617 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 PGAP2Q9UHJ9 254 aa15.14■□□□□ 0.01
BRCA1-213ENST00000476777 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-213ENST00000476777 GLIS2Q9BZE0 524 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-213ENST00000476777 ZNRF3Q9ULT6 936 aa15.13■□□□□ 0.01
BRCA1-213ENST00000476777 RRP7AQ9Y3A4 280 aaKnown RBP15.13■□□□□ 0.01
BRCA1-213ENST00000476777 GMPSP49915 693 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-213ENST00000476777 RTFDC1Q9BY42 306 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-213ENST00000476777 ZBTB3Q9H5J0 574 aa15.12■□□□□ 0.01
BRCA1-213ENST00000476777 PCDH10Q9P2E7 1040 aa15.12■□□□□ 0.01
BRCA1-213ENST00000476777 ATP6V0A2Q9Y487 856 aa15.12■□□□□ 0.01
BRCA1-213ENST00000476777 MYL6BP14649 208 aa15.11■□□□□ 0.01
BRCA1-213ENST00000476777 HIRAP54198 1017 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-213ENST00000476777 EIF4A1P60842 406 aaKnown RBP15.11■□□□□ 0.01
BRCA1-213ENST00000476777 CIAPIN1Q6FI81 312 aa15.11■□□□□ 0.01
BRCA1-213ENST00000476777 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
BRCA1-213ENST00000476777 GIGYF2Q6Y7W6 1299 aaKnown RBP15.1■□□□□ 0.01
BRCA1-213ENST00000476777 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
BRCA1-213ENST00000476777 PNISRQ8TF01 805 aaKnown RBP15.1■□□□□ 0.01
BRCA1-213ENST00000476777 CFAP44Q96MT7 982 aa15.1■□□□□ 0.01
BRCA1-213ENST00000476777 NLRP3Q96P20 1036 aa15.1■□□□□ 0.01
BRCA1-213ENST00000476777 TMX4Q9H1E5 349 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms