RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 RTCBQ9Y3I0 505 aaKnown RBP35.82■■■■□ 3.33
VEGFA-211ENST00000476772 SCN7AQ01118 1682 aa35.82■■■■□ 3.32
VEGFA-211ENST00000476772 UBN2Q6ZU65 1347 aa35.82■■■■□ 3.32
VEGFA-211ENST00000476772 PCCAP05165 728 aaPredicted RBP35.81■■■■□ 3.32
VEGFA-211ENST00000476772 TNS1Q9HBL0 1735 aaKnown RBP35.81■■■■□ 3.32
VEGFA-211ENST00000476772 RABL6Q3YEC7 729 aaPredicted RBP35.81■■■■□ 3.32
VEGFA-211ENST00000476772 AMIGO3Q86WK7 504 aa35.8■■■■□ 3.32
VEGFA-211ENST00000476772 ZBTB38Q8NAP3 1195 aaPredicted RBP35.8■■■■□ 3.32
VEGFA-211ENST00000476772 AK7Q96M32 723 aa35.8■■■■□ 3.32
VEGFA-211ENST00000476772 SURF6O75683 361 aaKnown RBP35.79■■■■□ 3.32
VEGFA-211ENST00000476772 APBA3O96018 575 aa35.79■■■■□ 3.32
VEGFA-211ENST00000476772 TXNRD1Q16881 649 aa35.79■■■■□ 3.32
VEGFA-211ENST00000476772 ZBTB47Q9UFB7 747 aaPredicted RBP35.79■■■■□ 3.32
VEGFA-211ENST00000476772 SMARCA5O60264 1052 aaPredicted RBP35.78■■■■□ 3.32
VEGFA-211ENST00000476772 FOXO4P98177 505 aa35.78■■■■□ 3.32
VEGFA-211ENST00000476772 FAM89AQ96GI7 184 aa35.78■■■■□ 3.32
VEGFA-211ENST00000476772 ZNF652Q9Y2D9 606 aa35.78■■■■□ 3.32
VEGFA-211ENST00000476772 PROM2Q8N271 834 aa35.78■■■■□ 3.32
VEGFA-211ENST00000476772 PLSCR1O15162 318 aa35.77■■■■□ 3.32
VEGFA-211ENST00000476772 C4AP0C0L4 1744 aa35.76■■■■□ 3.32
VEGFA-211ENST00000476772 CLEC4GQ6UXB4 293 aa35.75■■■■□ 3.31
VEGFA-211ENST00000476772 NARFQ9UHQ1 456 aa35.75■■■■□ 3.31
VEGFA-211ENST00000476772 UBR3Q6ZT12 1888 aa35.75■■■■□ 3.31
VEGFA-211ENST00000476772 LMBR1LQ6UX01 489 aa35.75■■■■□ 3.31
VEGFA-211ENST00000476772 LRRCC1Q9C099 1032 aa35.75■■■■□ 3.31
VEGFA-211ENST00000476772 PA2G4Q9UQ80 394 aaKnown RBP35.75■■■■□ 3.31
VEGFA-211ENST00000476772 NOP58Q9Y2X3 529 aaKnown RBP35.75■■■■□ 3.31
VEGFA-211ENST00000476772 BCL11AQ9H165 835 aa35.74■■■■□ 3.31
VEGFA-211ENST00000476772 TRMT112Q9UI30 125 aaKnown RBP35.74■■■■□ 3.31
VEGFA-211ENST00000476772 CDHR2Q9BYE9 1310 aa35.74■■■■□ 3.31
VEGFA-211ENST00000476772 RAB11FIP3O75154 756 aa35.73■■■■□ 3.31
VEGFA-211ENST00000476772 SYNE4Q8N205 404 aa35.73■■■■□ 3.31
VEGFA-211ENST00000476772 ARHGEF1Q92888 912 aaKnown RBP35.73■■■■□ 3.31
VEGFA-211ENST00000476772 TSHZ2Q9NRE2 1034 aa35.73■■■■□ 3.31
VEGFA-211ENST00000476772 SRP68Q9UHB9 627 aaKnown RBP35.73■■■■□ 3.31
VEGFA-211ENST00000476772 NIP7Q9Y221 180 aaKnown RBP eCLIP35.73■■■■□ 3.31
VEGFA-211ENST00000476772 RGL2O15211 777 aa35.72■■■■□ 3.31
VEGFA-211ENST00000476772 PHF14O94880 888 aa35.72■■■■□ 3.31
VEGFA-211ENST00000476772 PARP10Q53GL7 1025 aa35.72■■■■□ 3.31
VEGFA-211ENST00000476772 SUSD4Q5VX71 490 aa35.72■■■■□ 3.31
VEGFA-211ENST00000476772 USPL1Q5W0Q7 1092 aa35.72■■■■□ 3.31
VEGFA-211ENST00000476772 BCL2L12Q9HB09 334 aa35.72■■■■□ 3.31
VEGFA-211ENST00000476772 HSP90AB4PQ58FF6 505 aa35.71■■■■□ 3.31
VEGFA-211ENST00000476772 C16orf71Q8IYS4 520 aaPredicted RBP35.71■■■■□ 3.31
VEGFA-211ENST00000476772 PLA2G12BQ9BX93 195 aa35.71■■■■□ 3.31
VEGFA-211ENST00000476772 RFX5P48382 616 aaPredicted RBP35.7■■■■□ 3.31
VEGFA-211ENST00000476772 TRAPPC3LQ5T215 181 aa35.7■■■■□ 3.31
VEGFA-211ENST00000476772 ZPR1O75312 459 aa35.69■■■■□ 3.3
VEGFA-211ENST00000476772 CHMP3Q9Y3E7 222 aa35.69■■■■□ 3.3
VEGFA-211ENST00000476772 KLHDC4Q8TBB5 520 aa35.68■■■■□ 3.3
VEGFA-211ENST00000476772 RGPD3A6NKT7 1758 aaPredicted RBP35.68■■■■□ 3.3
VEGFA-211ENST00000476772 RGPD4Q7Z3J3 1758 aa35.68■■■■□ 3.3
VEGFA-211ENST00000476772 OS9Q13438 667 aaPredicted RBP35.68■■■■□ 3.3
VEGFA-211ENST00000476772 RHPN1Q8TCX5 695 aa35.68■■■■□ 3.3
VEGFA-211ENST00000476772 UTP14AQ9BVJ6 771 aaKnown RBP35.68■■■■□ 3.3
VEGFA-211ENST00000476772 FAM177BA6PVY3 158 aa35.67■■■■□ 3.3
VEGFA-211ENST00000476772 OTUD7AQ8TE49 926 aaPredicted RBP35.67■■■■□ 3.3
VEGFA-211ENST00000476772 IRS4O14654 1257 aaPredicted RBP35.66■■■■□ 3.3
VEGFA-211ENST00000476772 ADRA2BP18089 450 aa35.66■■■■□ 3.3
VEGFA-211ENST00000476772 RFC4P35249 363 aa35.66■■■■□ 3.3
VEGFA-211ENST00000476772 KIF1BPQ96EK5 621 aa35.66■■■■□ 3.3
VEGFA-211ENST00000476772 USP42Q9H9J4 1324 aaKnown RBP35.66■■■■□ 3.3
VEGFA-211ENST00000476772 HMGB2P26583 209 aaKnown RBP35.65■■■■□ 3.3
VEGFA-211ENST00000476772 PLEKHM2Q8IWE5 1019 aa35.65■■■■□ 3.3
VEGFA-211ENST00000476772 COPRSQ9NQ92 184 aa35.65■■■■□ 3.3
VEGFA-211ENST00000476772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.65■■■■□ 3.3
VEGFA-211ENST00000476772 NTSR2O95665 410 aa35.65■■■■□ 3.3
VEGFA-211ENST00000476772 PTPN12Q05209 780 aaKnown RBP35.65■■■■□ 3.3
VEGFA-211ENST00000476772 TBC1D9BQ66K14 1250 aa35.65■■■■□ 3.3
VEGFA-211ENST00000476772 MYH3P11055 1940 aa35.64■■■■□ 3.3
VEGFA-211ENST00000476772 SH3TC1Q8TE82 1336 aa35.64■■■■□ 3.3
VEGFA-211ENST00000476772 SIL1Q9H173 461 aa35.64■■■■□ 3.3
VEGFA-211ENST00000476772 IL1RAPL2Q9NP60 686 aa35.64■■■■□ 3.3
VEGFA-211ENST00000476772 G3BP1Q13283 466 aaKnown RBP eCLIP35.63■■■■□ 3.29
VEGFA-211ENST00000476772 ERC1Q8IUD2 1116 aa35.62■■■■□ 3.29
VEGFA-211ENST00000476772 SSFA2P28290 1259 aa35.62■■■■□ 3.29
VEGFA-211ENST00000476772 BICDL1Q6ZP65 573 aa35.62■■■■□ 3.29
VEGFA-211ENST00000476772 ILDR1Q86SU0 546 aaPredicted RBP35.62■■■■□ 3.29
VEGFA-211ENST00000476772 CSF1RP07333 972 aa35.61■■■■□ 3.29
VEGFA-211ENST00000476772 FAM161AQ3B820 660 aa35.61■■■■□ 3.29
VEGFA-211ENST00000476772 COL24A1Q17RW2 1714 aa35.6■■■■□ 3.29
VEGFA-211ENST00000476772 PDE8AO60658 829 aa35.6■■■■□ 3.29
VEGFA-211ENST00000476772 CTSWP56202 376 aa35.6■■■■□ 3.29
VEGFA-211ENST00000476772 DDX60Q8IY21 1712 aaKnown RBP35.6■■■■□ 3.29
VEGFA-211ENST00000476772 LAMB2P55268 1798 aa35.59■■■■□ 3.29
VEGFA-211ENST00000476772 C8orf34Q49A92 452 aa35.59■■■■□ 3.29
VEGFA-211ENST00000476772 CCDC85AQ96PX6 553 aaPredicted RBP35.59■■■■□ 3.29
VEGFA-211ENST00000476772 BACH2Q9BYV9 841 aa35.59■■■■□ 3.29
VEGFA-211ENST00000476772 SASH1O94885 1247 aa35.58■■■■□ 3.29
VEGFA-211ENST00000476772 ZNF827Q17R98 1081 aa35.58■■■■□ 3.29
VEGFA-211ENST00000476772 NUTM1Q86Y26 1132 aa35.58■■■■□ 3.29
VEGFA-211ENST00000476772 TTLL11Q8NHH1 800 aa35.58■■■■□ 3.29
VEGFA-211ENST00000476772 SALL3Q9BXA9 1300 aa35.58■■■■□ 3.29
VEGFA-211ENST00000476772 HCLS1P14317 486 aaPredicted RBP35.56■■■■□ 3.28
VEGFA-211ENST00000476772 AKT1S1Q96B36 256 aa35.56■■■■□ 3.28
VEGFA-211ENST00000476772 CCDC57Q2TAC2 916 aa35.56■■■■□ 3.28
VEGFA-211ENST00000476772 SETDB2Q96T68 719 aa35.56■■■■□ 3.28
VEGFA-211ENST00000476772 TUBGCP6Q96RT7 1819 aa35.55■■■■□ 3.28
VEGFA-211ENST00000476772 ZNF594Q96JF6 807 aaPredicted RBP35.54■■■■□ 3.28
VEGFA-211ENST00000476772 PDE1AP54750 535 aa35.53■■■■□ 3.28
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