RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 G2E3Q7L622 706 aa16.8■□□□□ 0.28
HLA-DPA1-246ENST00000476642 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
HLA-DPA1-246ENST00000476642 MAP3K2Q9Y2U5 619 aa16.8■□□□□ 0.28
HLA-DPA1-246ENST00000476642 HSP90B1P14625 803 aaKnown RBP16.79■□□□□ 0.28
HLA-DPA1-246ENST00000476642 RARSP54136 660 aaKnown RBP16.79■□□□□ 0.28
HLA-DPA1-246ENST00000476642 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
HLA-DPA1-246ENST00000476642 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
HLA-DPA1-246ENST00000476642 UTP14AQ9BVJ6 771 aaKnown RBP16.79■□□□□ 0.28
HLA-DPA1-246ENST00000476642 IPO8O15397 1037 aaKnown RBP16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 HSPA6P17066 643 aa16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 PDE6BP35913 854 aa16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 PRR5LQ6MZQ0 368 aa16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 NLRP10Q86W26 655 aa16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 CCDC191Q8NCU4 936 aa16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 MYD88Q99836 296 aa16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 PIM2Q9P1W9 311 aa16.78■□□□□ 0.28
HLA-DPA1-246ENST00000476642 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
HLA-DPA1-246ENST00000476642 DALRD3Q5D0E6 543 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 SUSD4Q5VX71 490 aa16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 ARHGAP45Q92619 1136 aa16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 BCL2L13Q9BXK5 485 aa16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 API5Q9BZZ5 524 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 CWC25Q9NXE8 425 aaPredicted RBP16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 RIC1Q4ADV7 1423 aa16.76■□□□□ 0.27
HLA-DPA1-246ENST00000476642 SH3TC1Q8TE82 1336 aa16.75■□□□□ 0.27
HLA-DPA1-246ENST00000476642 FAM177BA6PVY3 158 aa16.75■□□□□ 0.27
HLA-DPA1-246ENST00000476642 ATP5J2-PTCD1G3V325 749 aa16.75■□□□□ 0.27
HLA-DPA1-246ENST00000476642 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
HLA-DPA1-246ENST00000476642 H0YIN7 160 aa16.74■□□□□ 0.27
HLA-DPA1-246ENST00000476642 KIF3CO14782 793 aa16.74■□□□□ 0.27
HLA-DPA1-246ENST00000476642 NTSR2O95665 410 aa16.74■□□□□ 0.27
HLA-DPA1-246ENST00000476642 ZBTB38Q8NAP3 1195 aaPredicted RBP16.73■□□□□ 0.27
HLA-DPA1-246ENST00000476642 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
HLA-DPA1-246ENST00000476642 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
HLA-DPA1-246ENST00000476642 NEURL1BA8MQ27 555 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 ALDH1L1O75891 902 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 KCNA3P22001 575 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 SLC10A5Q5PT55 438 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 SLC4A10Q6U841 1118 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 NLRP3Q96P20 1036 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 SRCIN1Q9C0H9 1055 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 DLEC1Q9Y238 1755 aa16.72■□□□□ 0.27
HLA-DPA1-246ENST00000476642 F6X3S4 739 aa16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 TOMM70O94826 608 aa16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 PCCAP05165 728 aaPredicted RBP16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 CHRNA5P30532 468 aa16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 ERFEQ4G0M1 354 aa16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 NUTM1Q86Y26 1132 aa16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 C2CD5Q86YS7 1000 aa16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 C16orf71Q8IYS4 520 aaPredicted RBP16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 LAMB2P55268 1798 aa16.71■□□□□ 0.27
HLA-DPA1-246ENST00000476642 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
HLA-DPA1-246ENST00000476642 KLRG2A4D1S0 409 aaPredicted RBP16.7■□□□□ 0.26
HLA-DPA1-246ENST00000476642 IGKV5-2P06315 115 aa16.7■□□□□ 0.26
HLA-DPA1-246ENST00000476642 MS4A1P11836 297 aa16.7■□□□□ 0.26
HLA-DPA1-246ENST00000476642 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
HLA-DPA1-246ENST00000476642 BEND3Q5T5X7 828 aa16.7■□□□□ 0.26
HLA-DPA1-246ENST00000476642 ZKSCAN2Q63HK3 967 aa16.7■□□□□ 0.26
HLA-DPA1-246ENST00000476642 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
HLA-DPA1-246ENST00000476642 BCAR3O75815 825 aa16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 NPR1P16066 1061 aa16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 GCKRQ14397 625 aa16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 ATF7IPQ6VMQ6 1270 aa16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 FRAT1Q92837 279 aaPredicted RBP16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 MASTLQ96GX5 879 aa16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 CDHR2Q9BYE9 1310 aa16.69■□□□□ 0.26
HLA-DPA1-246ENST00000476642 ALDH1B1P30837 517 aa16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 APLP1P51693 650 aa16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 STYK1Q6J9G0 422 aa16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 RPGRQ92834 1020 aaKnown RBP16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 NMRK2Q9NPI5 230 aa16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 KDM2BQ8NHM5 1336 aa16.68■□□□□ 0.26
HLA-DPA1-246ENST00000476642 DDX60Q8IY21 1712 aaKnown RBP16.67■□□□□ 0.26
HLA-DPA1-246ENST00000476642 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
HLA-DPA1-246ENST00000476642 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
HLA-DPA1-246ENST00000476642 SRGNP10124 158 aa16.67■□□□□ 0.26
HLA-DPA1-246ENST00000476642 CRY2Q49AN0 593 aa16.67■□□□□ 0.26
HLA-DPA1-246ENST00000476642 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
HLA-DPA1-246ENST00000476642 MYH3P11055 1940 aa16.66■□□□□ 0.26
HLA-DPA1-246ENST00000476642 H7C1W4 665 aa16.66■□□□□ 0.26
HLA-DPA1-246ENST00000476642 PDE8AO60658 829 aa16.66■□□□□ 0.26
HLA-DPA1-246ENST00000476642 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
HLA-DPA1-246ENST00000476642 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.26
HLA-DPA1-246ENST00000476642 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
HLA-DPA1-246ENST00000476642 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
HLA-DPA1-246ENST00000476642 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
HLA-DPA1-246ENST00000476642 GRM8O00222 908 aa16.65■□□□□ 0.26
HLA-DPA1-246ENST00000476642 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms