RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 KRTAP4-8A0A0G2JLE6 195 aa10.92□□□□□ -0.66
NUP58-209ENST00000476553 SFI1A8K8P3 1242 aa10.92□□□□□ -0.66
NUP58-209ENST00000476553 USP17L5A8MUK1 530 aa10.92□□□□□ -0.66
NUP58-209ENST00000476553 EFCC1Q9HA90 598 aa10.92□□□□□ -0.66
NUP58-209ENST00000476553 KIAA1024Q9UPX6 916 aa10.92□□□□□ -0.66
NUP58-209ENST00000476553 NUDT8Q8WV74 236 aa10.91□□□□□ -0.66
NUP58-209ENST00000476553 ALG2Q9H553 416 aa10.91□□□□□ -0.66
NUP58-209ENST00000476553 USP21Q9UK80 565 aa10.91□□□□□ -0.66
NUP58-209ENST00000476553 RNF112Q9ULX5 631 aa10.91□□□□□ -0.66
NUP58-209ENST00000476553 TBC1D8BQ0IIM8 1120 aa10.9□□□□□ -0.66
NUP58-209ENST00000476553 PSAPL1Q6NUJ1 521 aa10.9□□□□□ -0.66
NUP58-209ENST00000476553 TPCN2Q8NHX9 752 aa10.9□□□□□ -0.66
NUP58-209ENST00000476553 HCN4Q9Y3Q4 1203 aa10.9□□□□□ -0.66
NUP58-209ENST00000476553 MCTP1Q6DN14 999 aa10.89□□□□□ -0.67
NUP58-209ENST00000476553 DNAJB12Q9NXW2 375 aaKnown RBP10.89□□□□□ -0.67
NUP58-209ENST00000476553 MCM6Q14566 821 aa10.88□□□□□ -0.67
NUP58-209ENST00000476553 TPRNQ4KMQ1 711 aa10.88□□□□□ -0.67
NUP58-209ENST00000476553 TRIM50Q86XT4 487 aa10.88□□□□□ -0.67
NUP58-209ENST00000476553 DEPDC4Q8N2C3 294 aa10.88□□□□□ -0.67
NUP58-209ENST00000476553 CHMP3Q9Y3E7 222 aa10.88□□□□□ -0.67
NUP58-209ENST00000476553 ZBTB7BO15156 539 aaPredicted RBP10.87□□□□□ -0.67
NUP58-209ENST00000476553 BTLAQ7Z6A9 289 aa10.87□□□□□ -0.67
NUP58-209ENST00000476553 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
NUP58-209ENST00000476553 DTWD1Q8N5C7 304 aa10.87□□□□□ -0.67
NUP58-209ENST00000476553 M0R2N6 131 aa10.86□□□□□ -0.67
NUP58-209ENST00000476553 CCDC102BQ68D86 513 aa10.85□□□□□ -0.67
NUP58-209ENST00000476553 WFDC12Q8WWY7 111 aa10.85□□□□□ -0.67
NUP58-209ENST00000476553 RGS9O75916 674 aaPredicted RBP10.84□□□□□ -0.67
NUP58-209ENST00000476553 NOS3P29474 1203 aa10.84□□□□□ -0.67
NUP58-209ENST00000476553 CLDN10P78369 228 aa10.84□□□□□ -0.67
NUP58-209ENST00000476553 PLEKHM2Q8IWE5 1019 aa10.84□□□□□ -0.67
NUP58-209ENST00000476553 GSX2Q9BZM3 304 aa10.84□□□□□ -0.67
NUP58-209ENST00000476553 IGFLR1Q9H665 355 aa10.84□□□□□ -0.67
NUP58-209ENST00000476553 C21orf2O43822 256 aa10.83□□□□□ -0.68
NUP58-209ENST00000476553 ATP1A2P50993 1020 aa10.83□□□□□ -0.68
NUP58-209ENST00000476553 GRIK5Q16478 980 aa10.83□□□□□ -0.68
NUP58-209ENST00000476553 HIF1AQ16665 826 aa10.83□□□□□ -0.68
NUP58-209ENST00000476553 MSL1Q68DK7 614 aa10.83□□□□□ -0.68
NUP58-209ENST00000476553 FBXO11Q86XK2 927 aa10.83□□□□□ -0.68
NUP58-209ENST00000476553 IER5Q5VY09 327 aa10.82□□□□□ -0.68
NUP58-209ENST00000476553 ALDH16A1Q8IZ83 802 aa10.82□□□□□ -0.68
NUP58-209ENST00000476553 STAG2Q8N3U4 1231 aa10.82□□□□□ -0.68
NUP58-209ENST00000476553 MEGF10Q96KG7 1140 aa10.82□□□□□ -0.68
NUP58-209ENST00000476553 TIMELESSQ9UNS1 1208 aa10.82□□□□□ -0.68
NUP58-209ENST00000476553 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
NUP58-209ENST00000476553 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
NUP58-209ENST00000476553 NFKB1P19838 968 aa10.81□□□□□ -0.68
NUP58-209ENST00000476553 IREB2P48200 963 aaKnown RBP10.81□□□□□ -0.68
NUP58-209ENST00000476553 LPIN3Q9BQK8 851 aa10.81□□□□□ -0.68
NUP58-209ENST00000476553 PPP1R12BO60237 982 aaPredicted RBP10.8□□□□□ -0.68
NUP58-209ENST00000476553 PRR23CQ6ZRP0 262 aa10.8□□□□□ -0.68
NUP58-209ENST00000476553 FRRS1LQ9P0K9 344 aa10.8□□□□□ -0.68
NUP58-209ENST00000476553 USP17L3A6NCW0 530 aa10.79□□□□□ -0.68
NUP58-209ENST00000476553 USP17L4A6NCW7 530 aa10.79□□□□□ -0.68
NUP58-209ENST00000476553 CCINQ13939 588 aa10.79□□□□□ -0.68
NUP58-209ENST00000476553 USP17L2Q6R6M4 530 aa10.79□□□□□ -0.68
NUP58-209ENST00000476553 USP17L1Q7RTZ2 530 aa10.79□□□□□ -0.68
NUP58-209ENST00000476553 SIX5Q8N196 739 aa10.79□□□□□ -0.68
NUP58-209ENST00000476553 C2orf49Q9BVC5 232 aaPredicted RBP10.79□□□□□ -0.68
NUP58-209ENST00000476553 COL17A1Q9UMD9 1497 aaPredicted RBP10.79□□□□□ -0.68
NUP58-209ENST00000476553 FAM35AQ86V20 835 aa10.78□□□□□ -0.68
NUP58-209ENST00000476553 LARGE2Q8N3Y3 721 aa10.78□□□□□ -0.68
NUP58-209ENST00000476553 TSEN2Q8NCE0 465 aaKnown RBP10.78□□□□□ -0.68
NUP58-209ENST00000476553 PNMA5Q96PV4 448 aa10.78□□□□□ -0.68
NUP58-209ENST00000476553 DKK1O94907 266 aa10.77□□□□□ -0.69
NUP58-209ENST00000476553 GRNP28799 593 aaKnown RBP10.77□□□□□ -0.69
NUP58-209ENST00000476553 IGF2-ASQ6U949 168 aa10.77□□□□□ -0.69
NUP58-209ENST00000476553 TGFBR3LH3BV60 316 aa10.76□□□□□ -0.69
NUP58-209ENST00000476553 MAP3K6O95382 1288 aa10.76□□□□□ -0.69
NUP58-209ENST00000476553 PCSK7Q16549 785 aa10.76□□□□□ -0.69
NUP58-209ENST00000476553 OGFOD1Q8N543 542 aa10.76□□□□□ -0.69
NUP58-209ENST00000476553 DMGDHQ9UI17 866 aaKnown RBP10.76□□□□□ -0.69
NUP58-209ENST00000476553 PALM3A6NDB9 673 aaPredicted RBP10.75□□□□□ -0.69
NUP58-209ENST00000476553 CPB1P15086 417 aa10.75□□□□□ -0.69
NUP58-209ENST00000476553 PLAURQ03405 335 aa10.75□□□□□ -0.69
NUP58-209ENST00000476553 PERM1Q5SV97 790 aa10.75□□□□□ -0.69
NUP58-209ENST00000476553 WFDC8Q8IUA0 241 aa10.75□□□□□ -0.69
NUP58-209ENST00000476553 PCMTD2Q9NV79 361 aa10.75□□□□□ -0.69
NUP58-209ENST00000476553 DEAF1O75398 565 aaPredicted RBP10.74□□□□□ -0.69
NUP58-209ENST00000476553 SLC51AQ86UW1 340 aa10.74□□□□□ -0.69
NUP58-209ENST00000476553 DZIP1LQ8IYY4 767 aaKnown RBP10.74□□□□□ -0.69
NUP58-209ENST00000476553 ADAMTS19Q8TE59 1207 aa10.74□□□□□ -0.69
NUP58-209ENST00000476553 TTC9Q92623 222 aa10.74□□□□□ -0.69
NUP58-209ENST00000476553 UCN2Q96RP3 112 aa10.74□□□□□ -0.69
NUP58-209ENST00000476553 BCS1LQ9Y276 419 aa10.74□□□□□ -0.69
NUP58-209ENST00000476553 CD97P48960 835 aa10.73□□□□□ -0.69
NUP58-209ENST00000476553 RTN1Q16799 776 aa10.73□□□□□ -0.69
NUP58-209ENST00000476553 TRPM4Q8TD43 1214 aa10.73□□□□□ -0.69
NUP58-209ENST00000476553 FMNL2Q96PY5 1086 aa10.73□□□□□ -0.69
NUP58-209ENST00000476553 DLL1O00548 723 aa10.72□□□□□ -0.69
NUP58-209ENST00000476553 FSTP19883 344 aa10.72□□□□□ -0.69
NUP58-209ENST00000476553 GAS2L2Q8NHY3 880 aa10.72□□□□□ -0.69
NUP58-209ENST00000476553 ATAD2Q6PL18 1390 aa10.72□□□□□ -0.69
NUP58-209ENST00000476553 ZBTB42B2RXF5 422 aa10.71□□□□□ -0.69
NUP58-209ENST00000476553 PAX4O43316 350 aa10.71□□□□□ -0.69
NUP58-209ENST00000476553 GPLD1P80108 840 aa10.71□□□□□ -0.69
NUP58-209ENST00000476553 NGLY1Q96IV0 654 aa10.71□□□□□ -0.69
NUP58-209ENST00000476553 ZFATQ9P243 1243 aa10.71□□□□□ -0.69
NUP58-209ENST00000476553 DHX32Q7L7V1 743 aaKnown RBP10.7□□□□□ -0.7
NUP58-209ENST00000476553 ATP9BO43861 1147 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms