RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 NUTM1Q86Y26 1132 aa22■■□□□ 1.11
APOBEC3F-203ENST00000476513 LTBP1Q14766 1721 aa22■■□□□ 1.11
APOBEC3F-203ENST00000476513 ECE1P42892 770 aa21.99■■□□□ 1.11
APOBEC3F-203ENST00000476513 DCTN1Q14203 1278 aa21.99■■□□□ 1.11
APOBEC3F-203ENST00000476513 CYP4F22Q6NT55 531 aa21.99■■□□□ 1.11
APOBEC3F-203ENST00000476513 GPR101Q96P66 508 aaPredicted RBP21.99■■□□□ 1.11
APOBEC3F-203ENST00000476513 THSD7BQ9C0I4 1608 aa21.98■■□□□ 1.11
APOBEC3F-203ENST00000476513 GRM1Q13255 1194 aa21.98■■□□□ 1.11
APOBEC3F-203ENST00000476513 CST9Q5W186 159 aa21.98■■□□□ 1.11
APOBEC3F-203ENST00000476513 LARGE2Q8N3Y3 721 aa21.98■■□□□ 1.11
APOBEC3F-203ENST00000476513 BEGAINQ9BUH8 593 aa21.98■■□□□ 1.11
APOBEC3F-203ENST00000476513 NYXQ9GZU5 481 aa21.98■■□□□ 1.11
APOBEC3F-203ENST00000476513 CCDC85CA6NKD9 419 aa21.97■■□□□ 1.11
APOBEC3F-203ENST00000476513 TRAF5O00463 557 aa21.97■■□□□ 1.11
APOBEC3F-203ENST00000476513 HOXA10P31260 410 aaPredicted RBP21.97■■□□□ 1.11
APOBEC3F-203ENST00000476513 SLC51AQ86UW1 340 aa21.97■■□□□ 1.11
APOBEC3F-203ENST00000476513 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
APOBEC3F-203ENST00000476513 USP50Q70EL3 339 aaPredicted RBP21.96■■□□□ 1.11
APOBEC3F-203ENST00000476513 NGEFQ8N5V2 710 aa21.96■■□□□ 1.11
APOBEC3F-203ENST00000476513 RPGRQ92834 1020 aaKnown RBP21.96■■□□□ 1.11
APOBEC3F-203ENST00000476513 TLL2Q9Y6L7 1015 aa21.96■■□□□ 1.11
APOBEC3F-203ENST00000476513 ERVV-1B6SEH8 477 aa21.95■■□□□ 1.1
APOBEC3F-203ENST00000476513 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
APOBEC3F-203ENST00000476513 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
APOBEC3F-203ENST00000476513 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
APOBEC3F-203ENST00000476513 GRIPAP1Q4V328 841 aa21.95■■□□□ 1.1
APOBEC3F-203ENST00000476513 NUDCQ9Y266 331 aa21.95■■□□□ 1.1
APOBEC3F-203ENST00000476513 RGS19P49795 217 aa21.94■■□□□ 1.1
APOBEC3F-203ENST00000476513 MLLT1Q03111 559 aaPredicted RBP21.94■■□□□ 1.1
APOBEC3F-203ENST00000476513 TAF7Q15545 349 aaPredicted RBP21.94■■□□□ 1.1
APOBEC3F-203ENST00000476513 MIS18AQ9NYP9 233 aa21.94■■□□□ 1.1
APOBEC3F-203ENST00000476513 TSKSQ9UJT2 592 aa21.94■■□□□ 1.1
APOBEC3F-203ENST00000476513 RIC1Q4ADV7 1423 aa21.93■■□□□ 1.1
APOBEC3F-203ENST00000476513 MAP3K15Q6ZN16 1313 aa21.93■■□□□ 1.1
APOBEC3F-203ENST00000476513 CRAMP1Q96RY5 1269 aa21.93■■□□□ 1.1
APOBEC3F-203ENST00000476513 UBN2Q6ZU65 1347 aa21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 TCERG1O14776 1098 aaKnown RBP21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 PPEF1O14829 653 aaPredicted RBP21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 AOC2O75106 756 aa21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 GPTP24298 496 aa21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 MAP2K2P36507 400 aa21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 TTLL7Q6ZT98 887 aa21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 NIM1KQ8IY84 436 aa21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 RBM17Q96I25 401 aaKnown RBP21.92■■□□□ 1.1
APOBEC3F-203ENST00000476513 IBTKQ9P2D0 1353 aaPredicted RBP21.91■■□□□ 1.1
APOBEC3F-203ENST00000476513 SUSD4Q5VX71 490 aa21.91■■□□□ 1.1
APOBEC3F-203ENST00000476513 PPIP5K2O43314 1243 aa21.9■■□□□ 1.1
APOBEC3F-203ENST00000476513 C3orf67Q6ZVT6 689 aa21.9■■□□□ 1.1
APOBEC3F-203ENST00000476513 ADARB2Q9NS39 739 aaKnown RBP21.9■■□□□ 1.1
APOBEC3F-203ENST00000476513 GPRC5DQ9NZD1 345 aa21.9■■□□□ 1.1
APOBEC3F-203ENST00000476513 RRP7AQ9Y3A4 280 aaKnown RBP21.9■■□□□ 1.1
APOBEC3F-203ENST00000476513 AOC3Q16853 763 aa21.89■■□□□ 1.09
APOBEC3F-203ENST00000476513 KIF6Q6ZMV9 814 aa21.89■■□□□ 1.09
APOBEC3F-203ENST00000476513 SAPCD2Q86UD0 394 aa21.89■■□□□ 1.09
APOBEC3F-203ENST00000476513 ZBTB3Q9H5J0 574 aa21.89■■□□□ 1.09
APOBEC3F-203ENST00000476513 CELF2O95319 508 aaKnown RBP21.88■■□□□ 1.09
APOBEC3F-203ENST00000476513 NTSR2O95665 410 aa21.88■■□□□ 1.09
APOBEC3F-203ENST00000476513 LAMB4A4D0S4 1761 aa21.87■■□□□ 1.09
APOBEC3F-203ENST00000476513 ZNF34Q8IZ26 560 aa21.87■■□□□ 1.09
APOBEC3F-203ENST00000476513 TRPM7Q96QT4 1865 aa21.87■■□□□ 1.09
APOBEC3F-203ENST00000476513 CA12O43570 354 aa21.86■■□□□ 1.09
APOBEC3F-203ENST00000476513 MYL6BP14649 208 aa21.86■■□□□ 1.09
APOBEC3F-203ENST00000476513 CXCL9Q07325 125 aa21.86■■□□□ 1.09
APOBEC3F-203ENST00000476513 GLIS2Q9BZE0 524 aaPredicted RBP21.86■■□□□ 1.09
APOBEC3F-203ENST00000476513 MCOLN1Q9GZU1 580 aa21.86■■□□□ 1.09
APOBEC3F-203ENST00000476513 VPS33BQ9H267 617 aa21.86■■□□□ 1.09
APOBEC3F-203ENST00000476513 NUP98P52948 1817 aa21.85■■□□□ 1.09
APOBEC3F-203ENST00000476513 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
APOBEC3F-203ENST00000476513 GMPSP49915 693 aaPredicted RBP21.85■■□□□ 1.09
APOBEC3F-203ENST00000476513 EIF4A1P60842 406 aaKnown RBP21.85■■□□□ 1.09
APOBEC3F-203ENST00000476513 PNISRQ8TF01 805 aaKnown RBP21.85■■□□□ 1.09
APOBEC3F-203ENST00000476513 HHIPL1Q96JK4 782 aa21.85■■□□□ 1.09
APOBEC3F-203ENST00000476513 ZNRF3Q9ULT6 936 aa21.85■■□□□ 1.09
APOBEC3F-203ENST00000476513 ATP6V0A2Q9Y487 856 aa21.85■■□□□ 1.09
APOBEC3F-203ENST00000476513 BRPF1P55201 1214 aaPredicted RBP21.84■■□□□ 1.09
APOBEC3F-203ENST00000476513 GIGYF2Q6Y7W6 1299 aaKnown RBP21.84■■□□□ 1.09
APOBEC3F-203ENST00000476513 TMX4Q9H1E5 349 aaPredicted RBP21.84■■□□□ 1.09
APOBEC3F-203ENST00000476513 PGAP2Q9UHJ9 254 aa21.84■■□□□ 1.09
APOBEC3F-203ENST00000476513 PPP1R42Q7Z4L9 355 aa21.83■■□□□ 1.09
APOBEC3F-203ENST00000476513 CFAP44Q96MT7 982 aa21.83■■□□□ 1.09
APOBEC3F-203ENST00000476513 NLRP3Q96P20 1036 aa21.83■■□□□ 1.09
APOBEC3F-203ENST00000476513 RTFDC1Q9BY42 306 aaPredicted RBP21.83■■□□□ 1.09
APOBEC3F-203ENST00000476513 SUPT20HQ8NEM7 779 aa21.82■■□□□ 1.08
APOBEC3F-203ENST00000476513 HIRAP54198 1017 aaPredicted RBP21.81■■□□□ 1.08
APOBEC3F-203ENST00000476513 PARP10Q53GL7 1025 aa21.81■■□□□ 1.08
APOBEC3F-203ENST00000476513 ZNF408Q9H9D4 720 aa21.81■■□□□ 1.08
APOBEC3F-203ENST00000476513 ABCC4O15439 1325 aa21.8■■□□□ 1.08
APOBEC3F-203ENST00000476513 SLC10A5Q5PT55 438 aa21.8■■□□□ 1.08
APOBEC3F-203ENST00000476513 CIAPIN1Q6FI81 312 aa21.8■■□□□ 1.08
APOBEC3F-203ENST00000476513 ZC3H15Q8WU90 426 aaKnown RBP21.8■■□□□ 1.08
APOBEC3F-203ENST00000476513 CDHR2Q9BYE9 1310 aa21.8■■□□□ 1.08
APOBEC3F-203ENST00000476513 KDM3BQ7LBC6 1761 aa21.79■■□□□ 1.08
APOBEC3F-203ENST00000476513 DGKZQ13574 1117 aa21.79■■□□□ 1.08
APOBEC3F-203ENST00000476513 DPP8Q6V1X1 898 aaPredicted RBP21.79■■□□□ 1.08
APOBEC3F-203ENST00000476513 TRPM4Q8TD43 1214 aa21.79■■□□□ 1.08
APOBEC3F-203ENST00000476513 UTP14AQ9BVJ6 771 aaKnown RBP21.79■■□□□ 1.08
APOBEC3F-203ENST00000476513 BCL2L13Q9BXK5 485 aa21.79■■□□□ 1.08
APOBEC3F-203ENST00000476513 RAD17O75943 681 aa21.78■■□□□ 1.08
APOBEC3F-203ENST00000476513 KIAA2012Q0VF49 1180 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms