RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
PSMB4-204ENST00000476467 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
PSMB4-204ENST00000476467 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
PSMB4-204ENST00000476467 UBN2Q6ZU65 1347 aa16.64■□□□□ 0.25
PSMB4-204ENST00000476467 TBC1D9BQ66K14 1250 aa16.63■□□□□ 0.25
PSMB4-204ENST00000476467 ZBTB7BO15156 539 aaPredicted RBP16.63■□□□□ 0.25
PSMB4-204ENST00000476467 CASZ1Q86V15 1759 aa16.62■□□□□ 0.25
PSMB4-204ENST00000476467 GRM8O00222 908 aa16.62■□□□□ 0.25
PSMB4-204ENST00000476467 MEIS3Q99687 375 aa16.62■□□□□ 0.25
PSMB4-204ENST00000476467 USP44Q9H0E7 712 aa16.62■□□□□ 0.25
PSMB4-204ENST00000476467 GNAI3P08754 354 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 AAMPQ13685 434 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 SETDB2Q96T68 719 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
PSMB4-204ENST00000476467 UTYO14607 1347 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 NFIXQ14938 502 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 BICDL1Q6ZP65 573 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
PSMB4-204ENST00000476467 PPP1R42Q7Z4L9 355 aa16.6■□□□□ 0.25
PSMB4-204ENST00000476467 ZBTB40Q9NUA8 1239 aa16.6■□□□□ 0.25
PSMB4-204ENST00000476467 PCCAP05165 728 aaPredicted RBP16.6■□□□□ 0.25
PSMB4-204ENST00000476467 UBTFL1P0CB47 393 aaPredicted RBP16.6■□□□□ 0.25
PSMB4-204ENST00000476467 R3HDM1Q15032 1099 aaKnown RBP16.6■□□□□ 0.25
PSMB4-204ENST00000476467 SUSD4Q5VX71 490 aa16.6■□□□□ 0.25
PSMB4-204ENST00000476467 SLC16A10Q8TF71 515 aa16.6■□□□□ 0.25
PSMB4-204ENST00000476467 UTP14AQ9BVJ6 771 aaKnown RBP16.6■□□□□ 0.25
PSMB4-204ENST00000476467 H7C1W4 665 aa16.59■□□□□ 0.25
PSMB4-204ENST00000476467 NBPF7P0C2Y1 421 aaPredicted RBP16.59■□□□□ 0.25
PSMB4-204ENST00000476467 TM4SF1P30408 202 aa16.59■□□□□ 0.25
PSMB4-204ENST00000476467 ZBTB38Q8NAP3 1195 aaPredicted RBP16.59■□□□□ 0.25
PSMB4-204ENST00000476467 NTSR2O95665 410 aa16.58■□□□□ 0.25
PSMB4-204ENST00000476467 CASP7P55210 303 aa16.58■□□□□ 0.25
PSMB4-204ENST00000476467 UBE3BQ7Z3V4 1068 aa16.58■□□□□ 0.25
PSMB4-204ENST00000476467 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.25
PSMB4-204ENST00000476467 NYXQ9GZU5 481 aa16.58■□□□□ 0.25
PSMB4-204ENST00000476467 TRMT112Q9UI30 125 aaKnown RBP16.58■□□□□ 0.25
PSMB4-204ENST00000476467 HDAC5Q9UQL6 1122 aa16.58■□□□□ 0.24
PSMB4-204ENST00000476467 LAMB2P55268 1798 aa16.58■□□□□ 0.24
PSMB4-204ENST00000476467 CDHR2Q9BYE9 1310 aa16.57■□□□□ 0.24
PSMB4-204ENST00000476467 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
PSMB4-204ENST00000476467 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
PSMB4-204ENST00000476467 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
PSMB4-204ENST00000476467 GNAI2P04899 355 aa16.57■□□□□ 0.24
PSMB4-204ENST00000476467 DDR1Q08345 913 aa16.57■□□□□ 0.24
PSMB4-204ENST00000476467 NBPF5PQ86XG9 351 aaPredicted RBP16.57■□□□□ 0.24
PSMB4-204ENST00000476467 POLRMTO00411 1230 aaKnown RBP16.56■□□□□ 0.24
PSMB4-204ENST00000476467 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
PSMB4-204ENST00000476467 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
PSMB4-204ENST00000476467 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
PSMB4-204ENST00000476467 RTL5Q5HYW3 569 aaPredicted RBP16.55■□□□□ 0.24
PSMB4-204ENST00000476467 SUCLG2Q96I99 432 aa16.55■□□□□ 0.24
PSMB4-204ENST00000476467 LRRFIP2Q9Y608 721 aaKnown RBP16.55■□□□□ 0.24
PSMB4-204ENST00000476467 MMP10P09238 476 aa16.55■□□□□ 0.24
PSMB4-204ENST00000476467 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
PSMB4-204ENST00000476467 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
PSMB4-204ENST00000476467 DDX60Q8IY21 1712 aaKnown RBP16.55■□□□□ 0.24
PSMB4-204ENST00000476467 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
PSMB4-204ENST00000476467 SOCS7O14512 581 aa16.54■□□□□ 0.24
PSMB4-204ENST00000476467 SERPINB2P05120 415 aa16.54■□□□□ 0.24
PSMB4-204ENST00000476467 IRS4O14654 1257 aaPredicted RBP16.54■□□□□ 0.24
PSMB4-204ENST00000476467 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
PSMB4-204ENST00000476467 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
PSMB4-204ENST00000476467 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
PSMB4-204ENST00000476467 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
PSMB4-204ENST00000476467 PLA2G12BQ9BX93 195 aa16.54■□□□□ 0.24
PSMB4-204ENST00000476467 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
PSMB4-204ENST00000476467 RIC1Q4ADV7 1423 aa16.53■□□□□ 0.24
PSMB4-204ENST00000476467 MYH3P11055 1940 aa16.53■□□□□ 0.24
PSMB4-204ENST00000476467 ABCC12Q96J65 1359 aa16.53■□□□□ 0.24
PSMB4-204ENST00000476467 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
PSMB4-204ENST00000476467 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
PSMB4-204ENST00000476467 KAZALD1Q96I82 304 aa16.53■□□□□ 0.24
PSMB4-204ENST00000476467 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
PSMB4-204ENST00000476467 NPHP1O15259 732 aa16.52■□□□□ 0.24
PSMB4-204ENST00000476467 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
PSMB4-204ENST00000476467 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.23
PSMB4-204ENST00000476467 KDM2BQ8NHM5 1336 aa16.51■□□□□ 0.23
PSMB4-204ENST00000476467 PDE8AO60658 829 aa16.51■□□□□ 0.23
PSMB4-204ENST00000476467 ZBTB7AO95365 584 aa16.51■□□□□ 0.23
PSMB4-204ENST00000476467 SLC10A5Q5PT55 438 aa16.51■□□□□ 0.23
PSMB4-204ENST00000476467 CEP85Q6P2H3 762 aa16.51■□□□□ 0.23
PSMB4-204ENST00000476467 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
PSMB4-204ENST00000476467 PCDHB15Q9Y5E8 787 aa16.51■□□□□ 0.23
PSMB4-204ENST00000476467 HCLS1P14317 486 aaPredicted RBP16.5■□□□□ 0.23
PSMB4-204ENST00000476467 ST5P78524 1137 aa16.5■□□□□ 0.23
PSMB4-204ENST00000476467 FOXO4P98177 505 aa16.5■□□□□ 0.23
PSMB4-204ENST00000476467 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
PSMB4-204ENST00000476467 EPHA10Q5JZY3 1008 aa16.5■□□□□ 0.23
PSMB4-204ENST00000476467 RPAP2Q8IXW5 612 aaPredicted RBP16.5■□□□□ 0.23
PSMB4-204ENST00000476467 MTX1Q13505 466 aa16.5■□□□□ 0.23
PSMB4-204ENST00000476467 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
PSMB4-204ENST00000476467 CTSWP56202 376 aa16.49■□□□□ 0.23
PSMB4-204ENST00000476467 ATP8B2P98198 1209 aa16.48■□□□□ 0.23
PSMB4-204ENST00000476467 LMBR1LQ6UX01 489 aa16.48■□□□□ 0.23
PSMB4-204ENST00000476467 ANKRD31Q8N7Z5 1873 aa16.48■□□□□ 0.23
PSMB4-204ENST00000476467 CSF1RP07333 972 aa16.47■□□□□ 0.23
PSMB4-204ENST00000476467 POLD1P28340 1107 aa16.47■□□□□ 0.23
PSMB4-204ENST00000476467 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms