RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 PI4KAP2A4QPH2 592 aa26.87■■□□□ 1.89
MAP1LC3A-204ENST00000476428 TRIM28Q13263 835 aaKnown RBP26.87■■□□□ 1.89
MAP1LC3A-204ENST00000476428 DALRD3Q5D0E6 543 aaKnown RBP26.87■■□□□ 1.89
MAP1LC3A-204ENST00000476428 PI4KAP1Q8N8J0 262 aa26.87■■□□□ 1.89
MAP1LC3A-204ENST00000476428 ZNF428Q96B54 188 aa26.87■■□□□ 1.89
MAP1LC3A-204ENST00000476428 MYD88Q99836 296 aa26.87■■□□□ 1.89
MAP1LC3A-204ENST00000476428 METTL22Q9BUU2 404 aaPredicted RBP26.87■■□□□ 1.89
MAP1LC3A-204ENST00000476428 KLRG2A4D1S0 409 aaPredicted RBP26.86■■□□□ 1.89
MAP1LC3A-204ENST00000476428 N4BP2Q86UW6 1770 aaPredicted RBP26.86■■□□□ 1.89
MAP1LC3A-204ENST00000476428 ABCC12Q96J65 1359 aa26.85■■□□□ 1.89
MAP1LC3A-204ENST00000476428 ZNF622Q969S3 477 aaKnown RBP eCLIP26.85■■□□□ 1.89
MAP1LC3A-204ENST00000476428 TRMT112Q9UI30 125 aaKnown RBP26.85■■□□□ 1.89
MAP1LC3A-204ENST00000476428 ADCY9O60503 1353 aa26.84■■□□□ 1.89
MAP1LC3A-204ENST00000476428 SRGNP10124 158 aa26.84■■□□□ 1.89
MAP1LC3A-204ENST00000476428 SLC10A5Q5PT55 438 aa26.84■■□□□ 1.89
MAP1LC3A-204ENST00000476428 SYNE4Q8N205 404 aa26.84■■□□□ 1.89
MAP1LC3A-204ENST00000476428 FKBP5Q13451 457 aaPredicted RBP26.83■■□□□ 1.89
MAP1LC3A-204ENST00000476428 TTLL6Q8N841 843 aa26.83■■□□□ 1.89
MAP1LC3A-204ENST00000476428 MASTLQ96GX5 879 aa26.82■■□□□ 1.88
MAP1LC3A-204ENST00000476428 RNF123Q5XPI4 1314 aa26.82■■□□□ 1.88
MAP1LC3A-204ENST00000476428 STYK1Q6J9G0 422 aa26.81■■□□□ 1.88
MAP1LC3A-204ENST00000476428 MRPL50Q8N5N7 158 aaKnown RBP26.81■■□□□ 1.88
MAP1LC3A-204ENST00000476428 SSH1Q8WYL5 1049 aa26.81■■□□□ 1.88
MAP1LC3A-204ENST00000476428 ANKRD31Q8N7Z5 1873 aa26.81■■□□□ 1.88
MAP1LC3A-204ENST00000476428 NPR1P16066 1061 aa26.8■■□□□ 1.88
MAP1LC3A-204ENST00000476428 C3orf67Q6ZVT6 689 aa26.8■■□□□ 1.88
MAP1LC3A-204ENST00000476428 CCDC191Q8NCU4 936 aa26.8■■□□□ 1.88
MAP1LC3A-204ENST00000476428 ZBED9Q6R2W3 1325 aa26.8■■□□□ 1.88
MAP1LC3A-204ENST00000476428 SH3TC1Q8TE82 1336 aa26.8■■□□□ 1.88
MAP1LC3A-204ENST00000476428 IGKV5-2P06315 115 aa26.79■■□□□ 1.88
MAP1LC3A-204ENST00000476428 CT47B1P0C2W7 299 aaPredicted RBP26.79■■□□□ 1.88
MAP1LC3A-204ENST00000476428 HCLS1P14317 486 aaPredicted RBP26.79■■□□□ 1.88
MAP1LC3A-204ENST00000476428 DNAAF4Q8WXU2 420 aa26.79■■□□□ 1.88
MAP1LC3A-204ENST00000476428 CNKSR1Q969H4 720 aa26.79■■□□□ 1.88
MAP1LC3A-204ENST00000476428 FAM89AQ96GI7 184 aa26.79■■□□□ 1.88
MAP1LC3A-204ENST00000476428 NEXNQ0ZGT2 675 aa26.78■■□□□ 1.88
MAP1LC3A-204ENST00000476428 CRY2Q49AN0 593 aa26.78■■□□□ 1.88
MAP1LC3A-204ENST00000476428 NLRP3Q96P20 1036 aa26.78■■□□□ 1.88
MAP1LC3A-204ENST00000476428 CWC25Q9NXE8 425 aaPredicted RBP26.78■■□□□ 1.88
MAP1LC3A-204ENST00000476428 RIC1Q4ADV7 1423 aa26.78■■□□□ 1.88
MAP1LC3A-204ENST00000476428 ALDH1L2Q3SY69 923 aa26.77■■□□□ 1.88
MAP1LC3A-204ENST00000476428 F6X3S4 739 aa26.76■■□□□ 1.87
MAP1LC3A-204ENST00000476428 RTL5Q5HYW3 569 aaPredicted RBP26.76■■□□□ 1.87
MAP1LC3A-204ENST00000476428 ARHGAP27Q6ZUM4 889 aa26.76■■□□□ 1.87
MAP1LC3A-204ENST00000476428 BCL2L13Q9BXK5 485 aa26.76■■□□□ 1.87
MAP1LC3A-204ENST00000476428 CWF19L2Q2TBE0 894 aaKnown RBP26.75■■□□□ 1.87
MAP1LC3A-204ENST00000476428 ZBTB38Q8NAP3 1195 aaPredicted RBP26.75■■□□□ 1.87
MAP1LC3A-204ENST00000476428 ANKRD36CQ5JPF3 1778 aa26.75■■□□□ 1.87
MAP1LC3A-204ENST00000476428 ARFGEF2Q9Y6D5 1785 aa26.75■■□□□ 1.87
MAP1LC3A-204ENST00000476428 NEURL1BA8MQ27 555 aa26.74■■□□□ 1.87
MAP1LC3A-204ENST00000476428 JARID2Q92833 1246 aaPredicted RBP26.74■■□□□ 1.87
MAP1LC3A-204ENST00000476428 PCCAP05165 728 aaPredicted RBP26.73■■□□□ 1.87
MAP1LC3A-204ENST00000476428 HOXA10P31260 410 aaPredicted RBP26.73■■□□□ 1.87
MAP1LC3A-204ENST00000476428 PRPF40BQ6NWY9 871 aaKnown RBP26.73■■□□□ 1.87
MAP1LC3A-204ENST00000476428 RPGRQ92834 1020 aaKnown RBP26.73■■□□□ 1.87
MAP1LC3A-204ENST00000476428 ZNF219Q9P2Y4 722 aaPredicted RBP26.73■■□□□ 1.87
MAP1LC3A-204ENST00000476428 IRS4O14654 1257 aaPredicted RBP26.72■■□□□ 1.87
MAP1LC3A-204ENST00000476428 ALDH1B1P30837 517 aa26.72■■□□□ 1.87
MAP1LC3A-204ENST00000476428 SMC4Q9NTJ3 1288 aa26.72■■□□□ 1.87
MAP1LC3A-204ENST00000476428 BRCA1P38398 1863 aaKnown RBP26.72■■□□□ 1.87
MAP1LC3A-204ENST00000476428 COL11A2P13942 1736 aaPredicted RBP26.71■■□□□ 1.87
MAP1LC3A-204ENST00000476428 TNRC6CQ9HCJ0 1690 aaKnown RBP26.71■■□□□ 1.87
MAP1LC3A-204ENST00000476428 C21orf2O43822 256 aa26.71■■□□□ 1.87
MAP1LC3A-204ENST00000476428 LINS1Q8NG48 757 aa26.71■■□□□ 1.87
MAP1LC3A-204ENST00000476428 RBM17Q96I25 401 aaKnown RBP26.71■■□□□ 1.87
MAP1LC3A-204ENST00000476428 GPBP1L1Q9HC44 474 aaPredicted RBP26.71■■□□□ 1.87
MAP1LC3A-204ENST00000476428 RARSP54136 660 aaKnown RBP26.7■■□□□ 1.86
MAP1LC3A-204ENST00000476428 BEND3Q5T5X7 828 aa26.7■■□□□ 1.86
MAP1LC3A-204ENST00000476428 CRAMP1Q96RY5 1269 aa26.7■■□□□ 1.86
MAP1LC3A-204ENST00000476428 GCKRQ14397 625 aa26.69■■□□□ 1.86
MAP1LC3A-204ENST00000476428 C7orf43Q8WVR3 580 aa26.69■■□□□ 1.86
MAP1LC3A-204ENST00000476428 DLEC1Q9Y238 1755 aa26.69■■□□□ 1.86
MAP1LC3A-204ENST00000476428 PTPRCP08575 1304 aa26.68■■□□□ 1.86
MAP1LC3A-204ENST00000476428 H7C1W4 665 aa26.67■■□□□ 1.86
MAP1LC3A-204ENST00000476428 BRPF1P55201 1214 aaPredicted RBP26.67■■□□□ 1.86
MAP1LC3A-204ENST00000476428 SF3B3Q15393 1217 aaKnown RBP26.67■■□□□ 1.86
MAP1LC3A-204ENST00000476428 SLC4A10Q6U841 1118 aa26.67■■□□□ 1.86
MAP1LC3A-204ENST00000476428 ZNF526Q8TF50 670 aaPredicted RBP26.67■■□□□ 1.86
MAP1LC3A-204ENST00000476428 CACNA1FO60840 1977 aa26.66■■□□□ 1.86
MAP1LC3A-204ENST00000476428 HSP90B1P14625 803 aaKnown RBP26.66■■□□□ 1.86
MAP1LC3A-204ENST00000476428 HSPA6P17066 643 aa26.66■■□□□ 1.86
MAP1LC3A-204ENST00000476428 CDHR2Q9BYE9 1310 aa26.65■■□□□ 1.86
MAP1LC3A-204ENST00000476428 PDE8AO60658 829 aa26.64■■□□□ 1.86
MAP1LC3A-204ENST00000476428 OLFM4Q6UX06 510 aa26.64■■□□□ 1.86
MAP1LC3A-204ENST00000476428 DDX46Q7L014 1031 aaKnown RBP26.64■■□□□ 1.86
MAP1LC3A-204ENST00000476428 NOB1Q9ULX3 412 aaKnown RBP26.64■■□□□ 1.86
MAP1LC3A-204ENST00000476428 SOGA3Q5TF21 947 aa26.63■■□□□ 1.85
MAP1LC3A-204ENST00000476428 UBE3BQ7Z3V4 1068 aa26.63■■□□□ 1.85
MAP1LC3A-204ENST00000476428 ABCC4O15439 1325 aa26.63■■□□□ 1.85
MAP1LC3A-204ENST00000476428 ARFGEF1Q9Y6D6 1849 aa26.62■■□□□ 1.85
MAP1LC3A-204ENST00000476428 NFKBIEO00221 500 aa26.62■■□□□ 1.85
MAP1LC3A-204ENST00000476428 ALDH1L1O75891 902 aa26.62■■□□□ 1.85
MAP1LC3A-204ENST00000476428 CASP7P55210 303 aa26.62■■□□□ 1.85
MAP1LC3A-204ENST00000476428 RASSF7Q02833 373 aa26.62■■□□□ 1.85
MAP1LC3A-204ENST00000476428 SRCIN1Q9C0H9 1055 aa26.62■■□□□ 1.85
MAP1LC3A-204ENST00000476428 SLX4Q8IY92 1834 aa26.62■■□□□ 1.85
MAP1LC3A-204ENST00000476428 PPEF1O14829 653 aaPredicted RBP26.6■■□□□ 1.85
MAP1LC3A-204ENST00000476428 BCAR3O75815 825 aa26.6■■□□□ 1.85
MAP1LC3A-204ENST00000476428 BBOX1O75936 387 aa26.6■■□□□ 1.85
MAP1LC3A-204ENST00000476428 GRAPQ13588 217 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms