RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	PUS7	Q96PZ0	661 aa	Known RBP	10.16	□□□□□ -0.78
HDAC9-223	ENST00000476135	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.16	□□□□□ -0.78
HDAC9-223	ENST00000476135	ROCK2	O75116	1388 aa	Known RBP	10.15	□□□□□ -0.78
HDAC9-223	ENST00000476135	KIF24	Q5T7B8	1368 aa		10.15	□□□□□ -0.78
HDAC9-223	ENST00000476135	LTBP3	Q9NS15	1303 aa		10.15	□□□□□ -0.78
HDAC9-223	ENST00000476135	HSP90AB2P	Q58FF8	381 aa		10.15	□□□□□ -0.78
HDAC9-223	ENST00000476135	IFNL2	Q8IZJ0	200 aa		10.15	□□□□□ -0.78
HDAC9-223	ENST00000476135	ZNF454	Q8N9F8	522 aa		10.15	□□□□□ -0.78
HDAC9-223	ENST00000476135	ADAMTSL1	Q8N6G6	1762 aa		10.14	□□□□□ -0.79
HDAC9-223	ENST00000476135	HR	O43593	1189 aa		10.14	□□□□□ -0.79
HDAC9-223	ENST00000476135	PHKG2	P15735	406 aa		10.14	□□□□□ -0.79
HDAC9-223	ENST00000476135	ECE1	P42892	770 aa		10.14	□□□□□ -0.79
HDAC9-223	ENST00000476135	KCNK17	Q96T54	332 aa		10.14	□□□□□ -0.79
HDAC9-223	ENST00000476135	ADAMTS7	Q9UKP4	1686 aa		10.14	□□□□□ -0.79
HDAC9-223	ENST00000476135	FLT4	P35916	1363 aa		10.14	□□□□□ -0.79
HDAC9-223	ENST00000476135	ERVV-2	B6SEH9	535 aa		10.13	□□□□□ -0.79
HDAC9-223	ENST00000476135		H0YIN7	160 aa		10.13	□□□□□ -0.79
HDAC9-223	ENST00000476135	CRKL	P46109	303 aa	Known RBP	10.13	□□□□□ -0.79
HDAC9-223	ENST00000476135	C2CD5	Q86YS7	1000 aa		10.13	□□□□□ -0.79
HDAC9-223	ENST00000476135	CAPNS2	Q96L46	248 aa		10.13	□□□□□ -0.79
HDAC9-223	ENST00000476135	ABT1	Q9ULW3	272 aa	Known RBP	10.13	□□□□□ -0.79
HDAC9-223	ENST00000476135	LTBP1	Q14766	1721 aa		10.13	□□□□□ -0.79
HDAC9-223	ENST00000476135	TONSL	Q96HA7	1378 aa		10.13	□□□□□ -0.79
HDAC9-223	ENST00000476135	CA12	O43570	354 aa		10.12	□□□□□ -0.79
HDAC9-223	ENST00000476135	EVI5	O60447	810 aa		10.12	□□□□□ -0.79
HDAC9-223	ENST00000476135	FOSB	P53539	338 aa		10.12	□□□□□ -0.79
HDAC9-223	ENST00000476135	CNTROB	Q8N137	903 aa		10.12	□□□□□ -0.79
HDAC9-223	ENST00000476135	GPR101	Q96P66	508 aa	Predicted RBP	10.12	□□□□□ -0.79
HDAC9-223	ENST00000476135	CASP8AP2	Q9UKL3	1982 aa		10.12	□□□□□ -0.79
HDAC9-223	ENST00000476135	ZPR1	O75312	459 aa		10.11	□□□□□ -0.79
HDAC9-223	ENST00000476135	MAP2K2	P36507	400 aa		10.11	□□□□□ -0.79
HDAC9-223	ENST00000476135	DGKZ	Q13574	1117 aa		10.11	□□□□□ -0.79
HDAC9-223	ENST00000476135	EAPP	Q56P03	285 aa	Predicted RBP	10.11	□□□□□ -0.79
HDAC9-223	ENST00000476135	L3MBTL2	Q969R5	705 aa		10.11	□□□□□ -0.79
HDAC9-223	ENST00000476135	TAOK3	Q9H2K8	898 aa		10.11	□□□□□ -0.79
HDAC9-223	ENST00000476135	EMILIN3	Q9NT22	766 aa		10.11	□□□□□ -0.79
HDAC9-223	ENST00000476135	PDZRN3	Q9UPQ7	1066 aa		10.11	□□□□□ -0.79
HDAC9-223	ENST00000476135	C21orf2	O43822	256 aa		10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	SERPINB2	P05120	415 aa		10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	NFIX	Q14938	502 aa		10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	USPL1	Q5W0Q7	1092 aa		10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	PNMA8A	Q86V59	439 aa	Predicted RBP	10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	BCL2L12	Q9HB09	334 aa		10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	HACL1	Q9UJ83	578 aa		10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	TSKS	Q9UJT2	592 aa		10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	TJP1	Q07157	1748 aa		10.1	□□□□□ -0.79
HDAC9-223	ENST00000476135	FYB1	O15117	783 aa		10.09	□□□□□ -0.79
HDAC9-223	ENST00000476135	EPHX2	P34913	555 aa		10.09	□□□□□ -0.79
HDAC9-223	ENST00000476135	INTS5	Q6P9B9	1019 aa	Known RBP	10.09	□□□□□ -0.79
HDAC9-223	ENST00000476135	GCC1	Q96CN9	775 aa		10.09	□□□□□ -0.79
HDAC9-223	ENST00000476135	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
HDAC9-223	ENST00000476135	HSP90AB1	P08238	724 aa	Known RBP	10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	MAP3K9	P80192	1104 aa		10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	MAP1S	Q66K74	1059 aa	Predicted RBP	10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	CYP4F22	Q6NT55	531 aa		10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	GGNBP2	Q9H3C7	697 aa		10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	NARF	Q9UHQ1	456 aa		10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	VPS9D1	Q9Y2B5	631 aa		10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	ANKRD31	Q8N7Z5	1873 aa		10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	TRPM7	Q96QT4	1865 aa		10.08	□□□□□ -0.8
HDAC9-223	ENST00000476135	CARMIL3	Q8ND23	1372 aa		10.07	□□□□□ -0.8
HDAC9-223	ENST00000476135	PTCD1	O75127	700 aa	Known RBP	10.07	□□□□□ -0.8
HDAC9-223	ENST00000476135	SOGA3	Q5TF21	947 aa		10.07	□□□□□ -0.8
HDAC9-223	ENST00000476135	SOS1	Q07889	1333 aa	Predicted RBP	10.07	□□□□□ -0.8
HDAC9-223	ENST00000476135	PDE6B	P35913	854 aa		10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	SOX10	P56693	466 aa		10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	CABP4	P57796	275 aa		10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	GRM1	Q13255	1194 aa		10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	EYA1	Q99502	592 aa		10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	HCST	Q9UBK5	93 aa		10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	TLL2	Q9Y6L7	1015 aa		10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	COL11A2	P13942	1736 aa	Predicted RBP	10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	ARFGEF2	Q9Y6D5	1785 aa		10.06	□□□□□ -0.8
HDAC9-223	ENST00000476135	AOC2	O75106	756 aa		10.05	□□□□□ -0.8
HDAC9-223	ENST00000476135	PTPRE	P23469	700 aa		10.05	□□□□□ -0.8
HDAC9-223	ENST00000476135	BRPF1	P55201	1214 aa	Predicted RBP	10.05	□□□□□ -0.8
HDAC9-223	ENST00000476135	BBX	Q8WY36	941 aa	Predicted RBP	10.05	□□□□□ -0.8
HDAC9-223	ENST00000476135	BRIP1	Q9BX63	1249 aa		10.05	□□□□□ -0.8
HDAC9-223	ENST00000476135	SLX4	Q8IY92	1834 aa		10.05	□□□□□ -0.8
HDAC9-223	ENST00000476135	KIF20B	Q96Q89	1820 aa		10.05	□□□□□ -0.8
HDAC9-223	ENST00000476135	ANKRD26	Q9UPS8	1709 aa		10.04	□□□□□ -0.8
HDAC9-223	ENST00000476135	CNKSR1	Q969H4	720 aa		10.04	□□□□□ -0.8
HDAC9-223	ENST00000476135	ZDHHC16	Q969W1	377 aa		10.04	□□□□□ -0.8
HDAC9-223	ENST00000476135	SLC4A5	Q9BY07	1137 aa		10.04	□□□□□ -0.8
HDAC9-223	ENST00000476135	ADAM33	Q9BZ11	813 aa		10.04	□□□□□ -0.8
HDAC9-223	ENST00000476135	CACNA1S	Q13698	1873 aa		10.04	□□□□□ -0.8
HDAC9-223	ENST00000476135	ZNF541	Q9H0D2	1346 aa		10.04	□□□□□ -0.8
HDAC9-223	ENST00000476135	COL15A1	P39059	1388 aa		10.03	□□□□□ -0.8
HDAC9-223	ENST00000476135	CST9	Q5W186	159 aa		10.03	□□□□□ -0.8
HDAC9-223	ENST00000476135	STYK1	Q6J9G0	422 aa		10.03	□□□□□ -0.8
HDAC9-223	ENST00000476135	CARD11	Q9BXL7	1154 aa		10.03	□□□□□ -0.8
HDAC9-223	ENST00000476135	EMILIN1	Q9Y6C2	1016 aa		10.03	□□□□□ -0.8
HDAC9-223	ENST00000476135	RNF123	Q5XPI4	1314 aa		10.03	□□□□□ -0.8
HDAC9-223	ENST00000476135	WASHC2A	Q641Q2	1341 aa		10.03	□□□□□ -0.8
HDAC9-223	ENST00000476135	PRPF40B	Q6NWY9	871 aa	Known RBP	10.02	□□□□□ -0.81
HDAC9-223	ENST00000476135	NBPF15	Q8N660	670 aa		10.02	□□□□□ -0.81
HDAC9-223	ENST00000476135	KCTD12	Q96CX2	325 aa	Known RBP	10.02	□□□□□ -0.81
HDAC9-223	ENST00000476135	HHIPL1	Q96JK4	782 aa		10.02	□□□□□ -0.81

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