RNA–Protein interactions for RNA: ENST00000476112.1

DCLRE1A-203, Transcript of DNA cross-link repair 1A, humanhuman

TSL 3

Gene DCLRE1A, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1A-203ENST00000476112 MEGF6O75095 1541 aa10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 COL24A1Q17RW2 1714 aa10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 SSTR3P32745 418 aaPredicted RBP10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 AMPHP49418 695 aa10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 USP46P62068 366 aa10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 AMHR2Q16671 573 aa10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 SLC27A3Q5K4L6 730 aa10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 MSL1Q68DK7 614 aa10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 USHBP1Q8N6Y0 703 aa10.65□□□□□ -0.7
DCLRE1A-203ENST00000476112 LY75O60449 1722 aa10.64□□□□□ -0.71
DCLRE1A-203ENST00000476112 RNF223E7ERA6 249 aa10.64□□□□□ -0.71
DCLRE1A-203ENST00000476112 HOXC9P31274 260 aa10.64□□□□□ -0.71
DCLRE1A-203ENST00000476112 ZCRB1Q8TBF4 217 aaKnown RBP10.64□□□□□ -0.71
DCLRE1A-203ENST00000476112 SLC16A10Q8TF71 515 aa10.64□□□□□ -0.71
DCLRE1A-203ENST00000476112 CCNL1Q9UK58 526 aaPredicted RBP10.64□□□□□ -0.71
DCLRE1A-203ENST00000476112 CEP350Q5VT06 3117 aa10.64□□□□□ -0.71
DCLRE1A-203ENST00000476112 ANKRD36BQ8N2N9 1353 aa10.64□□□□□ -0.71
DCLRE1A-203ENST00000476112 GIGYF1O75420 1035 aaPredicted RBP10.63□□□□□ -0.71
DCLRE1A-203ENST00000476112 YBX3P16989 372 aaKnown RBP eCLIP10.63□□□□□ -0.71
DCLRE1A-203ENST00000476112 RRS1Q15050 365 aaKnown RBP10.63□□□□□ -0.71
DCLRE1A-203ENST00000476112 Q3C1V9 767 aa10.63□□□□□ -0.71
DCLRE1A-203ENST00000476112 COG3Q96JB2 828 aa10.63□□□□□ -0.71
DCLRE1A-203ENST00000476112 REPIN1Q9BWE0 567 aaKnown RBP10.63□□□□□ -0.71
DCLRE1A-203ENST00000476112 PPEF1O14829 653 aaPredicted RBP10.62□□□□□ -0.71
DCLRE1A-203ENST00000476112 TRIM66O15016 1216 aa10.62□□□□□ -0.71
DCLRE1A-203ENST00000476112 NBPF6Q5VWK0 638 aa10.62□□□□□ -0.71
DCLRE1A-203ENST00000476112 GIGYF2Q6Y7W6 1299 aaKnown RBP10.62□□□□□ -0.71
DCLRE1A-203ENST00000476112 COL23A1Q86Y22 540 aaPredicted RBP10.62□□□□□ -0.71
DCLRE1A-203ENST00000476112 NBPF4Q96M43 638 aa10.62□□□□□ -0.71
DCLRE1A-203ENST00000476112 V9GY48 417 aaPredicted RBP10.62□□□□□ -0.71
DCLRE1A-203ENST00000476112 ST20-MTHFSA0A0A6YYL1 179 aa10.61□□□□□ -0.71
DCLRE1A-203ENST00000476112 ANKLE1Q8NAG6 615 aa10.61□□□□□ -0.71
DCLRE1A-203ENST00000476112 SLC24A3Q9HC58 644 aa10.61□□□□□ -0.71
DCLRE1A-203ENST00000476112 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
DCLRE1A-203ENST00000476112 USP47Q96K76 1375 aa10.61□□□□□ -0.71
DCLRE1A-203ENST00000476112 C5P01031 1676 aa10.6□□□□□ -0.71
DCLRE1A-203ENST00000476112 THAP11Q96EK4 314 aa10.6□□□□□ -0.71
DCLRE1A-203ENST00000476112 TESK2Q96S53 571 aa10.6□□□□□ -0.71
DCLRE1A-203ENST00000476112 GGNBP2Q9H3C7 697 aa10.6□□□□□ -0.71
DCLRE1A-203ENST00000476112 WWC3Q9ULE0 1092 aa10.6□□□□□ -0.71
DCLRE1A-203ENST00000476112 TONSLQ96HA7 1378 aa10.6□□□□□ -0.71
DCLRE1A-203ENST00000476112 HOXA2O43364 376 aa10.59□□□□□ -0.71
DCLRE1A-203ENST00000476112 BRICD5Q6PL45 260 aa10.59□□□□□ -0.71
DCLRE1A-203ENST00000476112 SMIM5Q71RC9 77 aa10.59□□□□□ -0.71
DCLRE1A-203ENST00000476112 TAF1LQ8IZX4 1826 aa10.58□□□□□ -0.72
DCLRE1A-203ENST00000476112 MPRIPQ6WCQ1 1025 aa10.58□□□□□ -0.72
DCLRE1A-203ENST00000476112 RNF19BQ6ZMZ0 732 aa10.58□□□□□ -0.72
DCLRE1A-203ENST00000476112 RAPGEF4Q8WZA2 1011 aa10.58□□□□□ -0.72
DCLRE1A-203ENST00000476112 PUS7Q96PZ0 661 aaKnown RBP10.58□□□□□ -0.72
DCLRE1A-203ENST00000476112 FYB1O15117 783 aa10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 TATP17735 454 aaPredicted RBP10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 SLC19A1P41440 591 aa10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 HSP90AB2PQ58FF8 381 aa10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 AMIGO3Q86WK7 504 aa10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 ZNF526Q8TF50 670 aaPredicted RBP10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 TOGARAM1Q9Y4F4 1720 aa10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 ATP10DQ9P241 1426 aa10.57□□□□□ -0.72
DCLRE1A-203ENST00000476112 ITGB4P16144 1822 aa10.56□□□□□ -0.72
DCLRE1A-203ENST00000476112 RTL1A6NKG5 1358 aa10.56□□□□□ -0.72
DCLRE1A-203ENST00000476112 PALLDQ8WX93 1383 aa10.56□□□□□ -0.72
DCLRE1A-203ENST00000476112 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
DCLRE1A-203ENST00000476112 HLA-CQ95604 372 aa10.56□□□□□ -0.72
DCLRE1A-203ENST00000476112 SMG6Q86US8 1419 aaKnown RBP10.56□□□□□ -0.72
DCLRE1A-203ENST00000476112 KIF20BQ96Q89 1820 aa10.56□□□□□ -0.72
DCLRE1A-203ENST00000476112 CYP27B1O15528 508 aa10.55□□□□□ -0.72
DCLRE1A-203ENST00000476112 PDE4DQ08499 809 aa10.55□□□□□ -0.72
DCLRE1A-203ENST00000476112 FAM160A2Q8N612 972 aaPredicted RBP10.55□□□□□ -0.72
DCLRE1A-203ENST00000476112 BEGAINQ9BUH8 593 aa10.55□□□□□ -0.72
DCLRE1A-203ENST00000476112 C4BP0C0L5 1744 aa10.55□□□□□ -0.72
DCLRE1A-203ENST00000476112 PCDH11XQ9BZA7 1347 aa10.55□□□□□ -0.72
DCLRE1A-203ENST00000476112 PCDH11YQ9BZA8 1340 aa10.55□□□□□ -0.72
DCLRE1A-203ENST00000476112 BRPF1P55201 1214 aaPredicted RBP10.54□□□□□ -0.72
DCLRE1A-203ENST00000476112 GUCA2AQ02747 115 aa10.54□□□□□ -0.72
DCLRE1A-203ENST00000476112 MSS51Q4VC12 460 aa10.54□□□□□ -0.72
DCLRE1A-203ENST00000476112 UBR3Q6ZT12 1888 aa10.54□□□□□ -0.72
DCLRE1A-203ENST00000476112 CGNL1Q0VF96 1302 aa10.54□□□□□ -0.72
DCLRE1A-203ENST00000476112 PPM1GO15355 546 aaPredicted RBP10.53□□□□□ -0.72
DCLRE1A-203ENST00000476112 SPIRE2Q8WWL2 714 aa10.53□□□□□ -0.72
DCLRE1A-203ENST00000476112 USB1Q9BQ65 265 aaKnown RBP10.53□□□□□ -0.72
DCLRE1A-203ENST00000476112 PRDM9Q9NQV7 894 aa10.53□□□□□ -0.72
DCLRE1A-203ENST00000476112 CD2APQ9Y5K6 639 aa10.53□□□□□ -0.72
DCLRE1A-203ENST00000476112 EMILIN1Q9Y6C2 1016 aa10.53□□□□□ -0.72
DCLRE1A-203ENST00000476112 INSRP06213 1382 aa10.52□□□□□ -0.72
DCLRE1A-203ENST00000476112 GFRA3O60609 400 aa10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 FDX1P10109 184 aa10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 LAPTM4AQ15012 233 aa10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 PIGBQ92521 554 aa10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 GPBP1L1Q9HC44 474 aaPredicted RBP10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 FCF1Q9Y324 198 aaKnown RBP10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 PKD1L3Q7Z443 1732 aa10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 IGSF1Q8N6C5 1336 aa10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 FLT4P35916 1363 aa10.52□□□□□ -0.73
DCLRE1A-203ENST00000476112 TMF1P82094 1093 aa10.51□□□□□ -0.73
DCLRE1A-203ENST00000476112 DIXDC1Q155Q3 683 aa10.51□□□□□ -0.73
DCLRE1A-203ENST00000476112 LINC00116Q8NCU8 138 aa10.51□□□□□ -0.73
DCLRE1A-203ENST00000476112 FLAD1Q8NFF5 587 aa10.51□□□□□ -0.73
DCLRE1A-203ENST00000476112 MAP2P11137 1827 aaKnown RBP10.5□□□□□ -0.73
DCLRE1A-203ENST00000476112 C6orf229H3BNL8 230 aa10.5□□□□□ -0.73
DCLRE1A-203ENST00000476112 MS4A1P11836 297 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms