RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 QTRT2Q9H974 415 aaKnown RBP25.17■■□□□ 1.62
ITGA4-207ENST00000476089 LMBR1LQ6UX01 489 aa25.16■■□□□ 1.62
ITGA4-207ENST00000476089 NUTM1Q86Y26 1132 aa25.16■■□□□ 1.62
ITGA4-207ENST00000476089 TBC1D32Q96NH3 1257 aa25.16■■□□□ 1.62
ITGA4-207ENST00000476089 HLFQ16534 295 aa25.16■■□□□ 1.62
ITGA4-207ENST00000476089 COPRSQ9NQ92 184 aa25.16■■□□□ 1.62
ITGA4-207ENST00000476089 TBC1D2BQ9UPU7 963 aa25.16■■□□□ 1.62
ITGA4-207ENST00000476089 FOXO4P98177 505 aa25.15■■□□□ 1.62
ITGA4-207ENST00000476089 SEPT12Q8IYM1 358 aa25.15■■□□□ 1.62
ITGA4-207ENST00000476089 SIL1Q9H173 461 aa25.15■■□□□ 1.62
ITGA4-207ENST00000476089 CHMP3Q9Y3E7 222 aa25.15■■□□□ 1.62
ITGA4-207ENST00000476089 ZNF831Q5JPB2 1677 aa25.15■■□□□ 1.62
ITGA4-207ENST00000476089 PCCAP05165 728 aaPredicted RBP25.14■■□□□ 1.62
ITGA4-207ENST00000476089 TSHZ3Q63HK5 1081 aa25.14■■□□□ 1.61
ITGA4-207ENST00000476089 ZBTB38Q8NAP3 1195 aaPredicted RBP25.14■■□□□ 1.61
ITGA4-207ENST00000476089 C22orf23Q9BZE7 217 aa25.14■■□□□ 1.61
ITGA4-207ENST00000476089 MSH5O43196 834 aa25.13■■□□□ 1.61
ITGA4-207ENST00000476089 IFIT2P09913 472 aaKnown RBP25.13■■□□□ 1.61
ITGA4-207ENST00000476089 GPATCH3Q96I76 525 aa25.13■■□□□ 1.61
ITGA4-207ENST00000476089 NHSQ6T4R5 1651 aa25.13■■□□□ 1.61
ITGA4-207ENST00000476089 RFX5P48382 616 aaPredicted RBP25.12■■□□□ 1.61
ITGA4-207ENST00000476089 FAM182BQ5T319 152 aa25.12■■□□□ 1.61
ITGA4-207ENST00000476089 KLHDC4Q8TBB5 520 aa25.12■■□□□ 1.61
ITGA4-207ENST00000476089 RREB1Q92766 1687 aa25.12■■□□□ 1.61
ITGA4-207ENST00000476089 GPTP24298 496 aa25.12■■□□□ 1.61
ITGA4-207ENST00000476089 PTPN12Q05209 780 aaKnown RBP25.12■■□□□ 1.61
ITGA4-207ENST00000476089 NUP98P52948 1817 aa25.11■■□□□ 1.61
ITGA4-207ENST00000476089 ANKRD36CQ5JPF3 1778 aa25.11■■□□□ 1.61
ITGA4-207ENST00000476089 SASH1O94885 1247 aa25.11■■□□□ 1.61
ITGA4-207ENST00000476089 NLRP10Q86W26 655 aa25.11■■□□□ 1.61
ITGA4-207ENST00000476089 TTC41PQ6P2S7 1318 aa25.1■■□□□ 1.61
ITGA4-207ENST00000476089 TRIM6-TRIM34B2RNG4 842 aa25.1■■□□□ 1.61
ITGA4-207ENST00000476089 DAXXQ9UER7 740 aaPredicted RBP25.1■■□□□ 1.61
ITGA4-207ENST00000476089 BTAF1O14981 1849 aa25.1■■□□□ 1.61
ITGA4-207ENST00000476089 COL5A3P25940 1745 aaPredicted RBP25.1■■□□□ 1.61
ITGA4-207ENST00000476089 ERICH6Q7L0X2 663 aa25.09■■□□□ 1.61
ITGA4-207ENST00000476089 AACSQ86V21 672 aa25.09■■□□□ 1.61
ITGA4-207ENST00000476089 FAM89AQ96GI7 184 aa25.09■■□□□ 1.61
ITGA4-207ENST00000476089 ERC2O15083 957 aa25.09■■□□□ 1.61
ITGA4-207ENST00000476089 RILPL2Q969X0 211 aa25.09■■□□□ 1.61
ITGA4-207ENST00000476089 USP42Q9H9J4 1324 aaKnown RBP25.08■■□□□ 1.61
ITGA4-207ENST00000476089 MYH14Q7Z406 1995 aaKnown RBP25.08■■□□□ 1.61
ITGA4-207ENST00000476089 PTF1AQ7RTS3 328 aa25.08■■□□□ 1.61
ITGA4-207ENST00000476089 CDHR2Q9BYE9 1310 aa25.08■■□□□ 1.6
ITGA4-207ENST00000476089 LINC00116Q8NCU8 138 aa25.07■■□□□ 1.6
ITGA4-207ENST00000476089 PLA2G12BQ9BX93 195 aa25.07■■□□□ 1.6
ITGA4-207ENST00000476089 TRMT112Q9UI30 125 aaKnown RBP25.07■■□□□ 1.6
ITGA4-207ENST00000476089 ZNF34Q8IZ26 560 aa25.07■■□□□ 1.6
ITGA4-207ENST00000476089 ECHDC1Q9NTX5 307 aa25.07■■□□□ 1.6
ITGA4-207ENST00000476089 GLRX3O76003 335 aaKnown RBP25.06■■□□□ 1.6
ITGA4-207ENST00000476089 PI4K2BQ8TCG2 481 aa25.06■■□□□ 1.6
ITGA4-207ENST00000476089 CNTNAP4Q9C0A0 1308 aa25.06■■□□□ 1.6
ITGA4-207ENST00000476089 CCDC57Q2TAC2 916 aa25.05■■□□□ 1.6
ITGA4-207ENST00000476089 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
ITGA4-207ENST00000476089 CAMTA2O94983 1202 aa25.05■■□□□ 1.6
ITGA4-207ENST00000476089 ZNF652Q9Y2D9 606 aa25.05■■□□□ 1.6
ITGA4-207ENST00000476089 EAF2Q96CJ1 260 aaPredicted RBP25.04■■□□□ 1.6
ITGA4-207ENST00000476089 CCNL1Q9UK58 526 aaPredicted RBP25.04■■□□□ 1.6
ITGA4-207ENST00000476089 SBF2Q86WG5 1849 aa25.03■■□□□ 1.6
ITGA4-207ENST00000476089 RBM25P49756 843 aaKnown RBP25.03■■□□□ 1.6
ITGA4-207ENST00000476089 CNTROBQ8N137 903 aa25.03■■□□□ 1.6
ITGA4-207ENST00000476089 KCNQ4P56696 695 aa25.02■■□□□ 1.6
ITGA4-207ENST00000476089 RC3H1Q5TC82 1133 aaKnown RBP25.02■■□□□ 1.6
ITGA4-207ENST00000476089 IRS4O14654 1257 aaPredicted RBP25.02■■□□□ 1.6
ITGA4-207ENST00000476089 TFCP2Q12800 502 aa25.02■■□□□ 1.6
ITGA4-207ENST00000476089 PARP10Q53GL7 1025 aa25.02■■□□□ 1.6
ITGA4-207ENST00000476089 CCDC8Q9H0W5 538 aaPredicted RBP25.02■■□□□ 1.6
ITGA4-207ENST00000476089 UBN2Q6ZU65 1347 aa25.02■■□□□ 1.6
ITGA4-207ENST00000476089 REC8O95072 547 aa25.01■■□□□ 1.59
ITGA4-207ENST00000476089 CSF1RP07333 972 aa25.01■■□□□ 1.59
ITGA4-207ENST00000476089 IL15P40933 162 aaPredicted RBP25.01■■□□□ 1.59
ITGA4-207ENST00000476089 BECN1Q14457 450 aa25.01■■□□□ 1.59
ITGA4-207ENST00000476089 ZNF772Q68DY9 489 aaPredicted RBP25.01■■□□□ 1.59
ITGA4-207ENST00000476089 BCL11BQ9C0K0 894 aaPredicted RBP25.01■■□□□ 1.59
ITGA4-207ENST00000476089 IFIT5Q13325 482 aaKnown RBP25■■□□□ 1.59
ITGA4-207ENST00000476089 TAF7LQ5H9L4 462 aa25■■□□□ 1.59
ITGA4-207ENST00000476089 FAM196AQ6ZSG2 479 aa25■■□□□ 1.59
ITGA4-207ENST00000476089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25■■□□□ 1.59
ITGA4-207ENST00000476089 EYA2O00167 538 aa25■■□□□ 1.59
ITGA4-207ENST00000476089 CIAO1O76071 339 aa25■■□□□ 1.59
ITGA4-207ENST00000476089 TNNI3KQ59H18 835 aa25■■□□□ 1.59
ITGA4-207ENST00000476089 KRT27Q7Z3Y8 459 aa25■■□□□ 1.59
ITGA4-207ENST00000476089 UTP14AQ9BVJ6 771 aaKnown RBP25■■□□□ 1.59
ITGA4-207ENST00000476089 FPGT-TNNI3KV9GXZ4 949 aa25■■□□□ 1.59
ITGA4-207ENST00000476089 PDE8AO60658 829 aa24.99■■□□□ 1.59
ITGA4-207ENST00000476089 CLEC4GQ6UXB4 293 aa24.99■■□□□ 1.59
ITGA4-207ENST00000476089 SYNE4Q8N205 404 aa24.99■■□□□ 1.59
ITGA4-207ENST00000476089 FBXO3Q9UK99 471 aa24.99■■□□□ 1.59
ITGA4-207ENST00000476089 MAP4K4O95819 1239 aaPredicted RBP24.98■■□□□ 1.59
ITGA4-207ENST00000476089 CTSWP56202 376 aa24.98■■□□□ 1.59
ITGA4-207ENST00000476089 AK7Q96M32 723 aa24.98■■□□□ 1.59
ITGA4-207ENST00000476089 NIP7Q9Y221 180 aaKnown RBP eCLIP24.98■■□□□ 1.59
ITGA4-207ENST00000476089 AK9Q5TCS8 1911 aa24.98■■□□□ 1.59
ITGA4-207ENST00000476089 SH3TC1Q8TE82 1336 aa24.98■■□□□ 1.59
ITGA4-207ENST00000476089 RPS6KA4O75676 772 aa24.98■■□□□ 1.59
ITGA4-207ENST00000476089 HSP90B1P14625 803 aaKnown RBP24.98■■□□□ 1.59
ITGA4-207ENST00000476089 CHMLP26374 656 aa24.98■■□□□ 1.59
ITGA4-207ENST00000476089 SUSD4Q5VX71 490 aa24.98■■□□□ 1.59
ITGA4-207ENST00000476089 ATG9AQ7Z3C6 839 aa24.98■■□□□ 1.59
ITGA4-207ENST00000476089 ZNF594Q96JF6 807 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms