RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 KCNQ3O43525 872 aa14.09□□□□□ -0.15
CALD1-217ENST00000475772 BICDL1Q6ZP65 573 aa14.09□□□□□ -0.15
CALD1-217ENST00000475772 C2CD5Q86YS7 1000 aa14.09□□□□□ -0.15
CALD1-217ENST00000475772 TTLL6Q8N841 843 aa14.09□□□□□ -0.15
CALD1-217ENST00000475772 TNRC6CQ9HCJ0 1690 aaKnown RBP14.09□□□□□ -0.15
CALD1-217ENST00000475772 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
CALD1-217ENST00000475772 GLTPD2A6NH11 291 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 GNAT3A8MTJ3 354 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 A1BGP04217 495 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 DOK7Q18PE1 504 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 C16orf71Q8IYS4 520 aaPredicted RBP14.08□□□□□ -0.16
CALD1-217ENST00000475772 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 JMYQ8N9B5 988 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 KLRG1Q96E93 195 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 TBC1D2BQ9UPU7 963 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 NPC1L1Q9UHC9 1359 aa14.08□□□□□ -0.16
CALD1-217ENST00000475772 DICER1Q9UPY3 1922 aaKnown RBP14.07□□□□□ -0.16
CALD1-217ENST00000475772 H0YIN7 160 aa14.07□□□□□ -0.16
CALD1-217ENST00000475772 SLC34A2O95436 690 aa14.07□□□□□ -0.16
CALD1-217ENST00000475772 STARD3NLO95772 234 aa14.07□□□□□ -0.16
CALD1-217ENST00000475772 LMNB1P20700 586 aa14.07□□□□□ -0.16
CALD1-217ENST00000475772 CNGB1Q14028 1251 aaPredicted RBP14.07□□□□□ -0.16
CALD1-217ENST00000475772 FER1L6Q2WGJ9 1857 aa14.07□□□□□ -0.16
CALD1-217ENST00000475772 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
CALD1-217ENST00000475772 PRR5LQ6MZQ0 368 aa14.06□□□□□ -0.16
CALD1-217ENST00000475772 TTC5Q8N0Z6 440 aa14.06□□□□□ -0.16
CALD1-217ENST00000475772 GAS2L2Q8NHY3 880 aa14.06□□□□□ -0.16
CALD1-217ENST00000475772 USP16Q9Y5T5 823 aa14.06□□□□□ -0.16
CALD1-217ENST00000475772 ZC3H4Q9UPT8 1303 aaKnown RBP14.06□□□□□ -0.16
CALD1-217ENST00000475772 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
CALD1-217ENST00000475772 SLX4Q8IY92 1834 aa14.06□□□□□ -0.16
CALD1-217ENST00000475772 A0A087WZG4 1122 aa14.05□□□□□ -0.16
CALD1-217ENST00000475772 IL6STP40189 918 aaPredicted RBP14.05□□□□□ -0.16
CALD1-217ENST00000475772 TEFQ10587 303 aa14.05□□□□□ -0.16
CALD1-217ENST00000475772 BRIP1Q9BX63 1249 aa14.05□□□□□ -0.16
CALD1-217ENST00000475772 TEX13AQ9BXU3 409 aaPredicted RBP14.05□□□□□ -0.16
CALD1-217ENST00000475772 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
CALD1-217ENST00000475772 PRAMEF22A3QJZ6 481 aa14.04□□□□□ -0.16
CALD1-217ENST00000475772 CAMTA2O94983 1202 aa14.04□□□□□ -0.16
CALD1-217ENST00000475772 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
CALD1-217ENST00000475772 SMC1BQ8NDV3 1235 aa14.04□□□□□ -0.16
CALD1-217ENST00000475772 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
CALD1-217ENST00000475772 SCN7AQ01118 1682 aa14.04□□□□□ -0.16
CALD1-217ENST00000475772 TIAM2Q8IVF5 1701 aa14.04□□□□□ -0.16
CALD1-217ENST00000475772 C21orf2O43822 256 aa14.03□□□□□ -0.16
CALD1-217ENST00000475772 CAMK2BQ13554 666 aa14.03□□□□□ -0.16
CALD1-217ENST00000475772 LCE2DQ5TA82 110 aaPredicted RBP14.03□□□□□ -0.16
CALD1-217ENST00000475772 ZNF622Q969S3 477 aaKnown RBP eCLIP14.03□□□□□ -0.16
CALD1-217ENST00000475772 FAM163AQ96GL9 167 aaPredicted RBP14.03□□□□□ -0.16
CALD1-217ENST00000475772 FMNL2Q96PY5 1086 aa14.03□□□□□ -0.16
CALD1-217ENST00000475772 WDR70Q9NW82 654 aa14.03□□□□□ -0.16
CALD1-217ENST00000475772 CACNA1SQ13698 1873 aa14.03□□□□□ -0.16
CALD1-217ENST00000475772 ST18O60284 1047 aa14.02□□□□□ -0.17
CALD1-217ENST00000475772 PRKAR2BP31323 418 aa14.02□□□□□ -0.17
CALD1-217ENST00000475772 PIP4K2AP48426 406 aaPredicted RBP14.02□□□□□ -0.17
CALD1-217ENST00000475772 COL13A1Q5TAT6 717 aaPredicted RBP14.02□□□□□ -0.17
CALD1-217ENST00000475772 ZNF330Q9Y3S2 320 aaPredicted RBP14.02□□□□□ -0.17
CALD1-217ENST00000475772 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
CALD1-217ENST00000475772 PDE6BP35913 854 aa14.01□□□□□ -0.17
CALD1-217ENST00000475772 PTCD2Q8WV60 388 aaKnown RBP14.01□□□□□ -0.17
CALD1-217ENST00000475772 PDZRN3Q9UPQ7 1066 aa14.01□□□□□ -0.17
CALD1-217ENST00000475772 BCORQ6W2J9 1755 aa14.01□□□□□ -0.17
CALD1-217ENST00000475772 SRGNP10124 158 aa14□□□□□ -0.17
CALD1-217ENST00000475772 SETDB2Q96T68 719 aa14□□□□□ -0.17
CALD1-217ENST00000475772 ZSWIM6Q9HCJ5 1215 aa14□□□□□ -0.17
CALD1-217ENST00000475772 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
CALD1-217ENST00000475772 GPR153Q6NV75 609 aa13.99□□□□□ -0.17
CALD1-217ENST00000475772 DZIP3Q86Y13 1208 aaKnown RBP13.99□□□□□ -0.17
CALD1-217ENST00000475772 ZNF710Q8N1W2 664 aa13.99□□□□□ -0.17
CALD1-217ENST00000475772 C7orf43Q8WVR3 580 aa13.99□□□□□ -0.17
CALD1-217ENST00000475772 EMILIN3Q9NT22 766 aa13.99□□□□□ -0.17
CALD1-217ENST00000475772 ARFGEF2Q9Y6D5 1785 aa13.99□□□□□ -0.17
CALD1-217ENST00000475772 LTBP3Q9NS15 1303 aa13.98□□□□□ -0.17
CALD1-217ENST00000475772 NBPF26B4DH59 902 aa13.98□□□□□ -0.17
CALD1-217ENST00000475772 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
CALD1-217ENST00000475772 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
CALD1-217ENST00000475772 STYK1Q6J9G0 422 aa13.98□□□□□ -0.17
CALD1-217ENST00000475772 NBPF10Q6P3W6 841 aaKnown RBP13.98□□□□□ -0.17
CALD1-217ENST00000475772 MCM10Q7L590 875 aa13.98□□□□□ -0.17
CALD1-217ENST00000475772 NBPF15Q8N660 670 aa13.98□□□□□ -0.17
CALD1-217ENST00000475772 KLRG2A4D1S0 409 aaPredicted RBP13.97□□□□□ -0.17
CALD1-217ENST00000475772 DDNO94850 711 aaPredicted RBP13.97□□□□□ -0.17
CALD1-217ENST00000475772 PPP2R1AP30153 589 aa13.97□□□□□ -0.17
CALD1-217ENST00000475772 PRPF40BQ6NWY9 871 aaKnown RBP13.97□□□□□ -0.17
CALD1-217ENST00000475772 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
CALD1-217ENST00000475772 OXER1Q8TDS5 423 aa13.97□□□□□ -0.17
CALD1-217ENST00000475772 CNKSR1Q969H4 720 aa13.97□□□□□ -0.17
CALD1-217ENST00000475772 MASTLQ96GX5 879 aa13.97□□□□□ -0.17
CALD1-217ENST00000475772 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
CALD1-217ENST00000475772 E2F4Q16254 413 aa13.96□□□□□ -0.17
CALD1-217ENST00000475772 CLEC4GQ6UXB4 293 aa13.96□□□□□ -0.17
CALD1-217ENST00000475772 TAOK3Q9H2K8 898 aa13.96□□□□□ -0.17
CALD1-217ENST00000475772 PCDHGA4Q9Y5G9 962 aa13.96□□□□□ -0.17
CALD1-217ENST00000475772 HOXB1P14653 301 aaPredicted RBP13.95□□□□□ -0.18
CALD1-217ENST00000475772 HLFQ16534 295 aa13.95□□□□□ -0.18
CALD1-217ENST00000475772 DLG5Q8TDM6 1919 aa13.94□□□□□ -0.18
CALD1-217ENST00000475772 U2AF1L5P0DN76 240 aaPredicted RBP13.94□□□□□ -0.18
CALD1-217ENST00000475772 ST5P78524 1137 aa13.94□□□□□ -0.18
CALD1-217ENST00000475772 U2AF1Q01081 240 aaKnown RBP eCLIP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms