RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 LARGE2Q8N3Y3 721 aa13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 GPRC5DQ9NZD1 345 aa13.76□□□□□ -0.21
CCHCR1-212ENST00000475684 COL4A5P29400 1685 aa13.75□□□□□ -0.21
CCHCR1-212ENST00000475684 DLL1O00548 723 aa13.75□□□□□ -0.21
CCHCR1-212ENST00000475684 FXR1P51114 621 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCHCR1-212ENST00000475684 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
CCHCR1-212ENST00000475684 FAM155AB1AL88 458 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-212ENST00000475684 PKN2Q16513 984 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-212ENST00000475684 RGMBQ6NW40 437 aa13.74□□□□□ -0.21
CCHCR1-212ENST00000475684 CDC37L1Q7L3B6 337 aa13.74□□□□□ -0.21
CCHCR1-212ENST00000475684 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
CCHCR1-212ENST00000475684 PGAP2Q9UHJ9 254 aa13.74□□□□□ -0.21
CCHCR1-212ENST00000475684 TPTE2Q6XPS3 522 aa13.73□□□□□ -0.21
CCHCR1-212ENST00000475684 NIM1KQ8IY84 436 aa13.73□□□□□ -0.21
CCHCR1-212ENST00000475684 TEX13AQ9BXU3 409 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-212ENST00000475684 MRC1P22897 1456 aa13.73□□□□□ -0.21
CCHCR1-212ENST00000475684 CC2D2BQ6DHV5 1058 aa13.72□□□□□ -0.21
CCHCR1-212ENST00000475684 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-212ENST00000475684 ZC3H15Q8WU90 426 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-212ENST00000475684 FAM177BA6PVY3 158 aa13.71□□□□□ -0.21
CCHCR1-212ENST00000475684 A1BGP04217 495 aa13.71□□□□□ -0.21
CCHCR1-212ENST00000475684 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-212ENST00000475684 USP48Q86UV5 1035 aa13.71□□□□□ -0.21
CCHCR1-212ENST00000475684 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.21
CCHCR1-212ENST00000475684 SNED1Q8TER0 1413 aa13.71□□□□□ -0.22
CCHCR1-212ENST00000475684 GMPSP49915 693 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-212ENST00000475684 HIRAP54198 1017 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-212ENST00000475684 ZNF496Q96IT1 587 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-212ENST00000475684 CSRNP1Q96S65 589 aa13.7□□□□□ -0.22
CCHCR1-212ENST00000475684 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
CCHCR1-212ENST00000475684 GTF2E1P29083 439 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-212ENST00000475684 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
CCHCR1-212ENST00000475684 CLEC4GQ6UXB4 293 aa13.69□□□□□ -0.22
CCHCR1-212ENST00000475684 DLK2Q6UY11 383 aa13.69□□□□□ -0.22
CCHCR1-212ENST00000475684 C2orf69Q8N8R5 385 aa13.69□□□□□ -0.22
CCHCR1-212ENST00000475684 ZNF652Q9Y2D9 606 aa13.69□□□□□ -0.22
CCHCR1-212ENST00000475684 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
CCHCR1-212ENST00000475684 PPIP5K2O43314 1243 aa13.68□□□□□ -0.22
CCHCR1-212ENST00000475684 CXCL9Q07325 125 aa13.68□□□□□ -0.22
CCHCR1-212ENST00000475684 BCL2L13Q9BXK5 485 aa13.68□□□□□ -0.22
CCHCR1-212ENST00000475684 GBA2Q9HCG7 927 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-212ENST00000475684 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
CCHCR1-212ENST00000475684 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-212ENST00000475684 NIP7Q9Y221 180 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCHCR1-212ENST00000475684 AOC3Q16853 763 aa13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 ZNF790Q6PG37 636 aa13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 REM2Q8IYK8 340 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 TRPM4Q8TD43 1214 aa13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 ZNF296Q8WUU4 475 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 ZNRF3Q9ULT6 936 aa13.66□□□□□ -0.22
CCHCR1-212ENST00000475684 AKAP11Q9UKA4 1901 aa13.65□□□□□ -0.22
CCHCR1-212ENST00000475684 SLC10A3P09131 477 aa13.65□□□□□ -0.22
CCHCR1-212ENST00000475684 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-212ENST00000475684 FBXO46Q6PJ61 603 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-212ENST00000475684 RPGRQ92834 1020 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-212ENST00000475684 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
CCHCR1-212ENST00000475684 IL13P35225 146 aa13.64□□□□□ -0.23
CCHCR1-212ENST00000475684 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
CCHCR1-212ENST00000475684 CRY2Q49AN0 593 aa13.64□□□□□ -0.23
CCHCR1-212ENST00000475684 FMNL2Q96PY5 1086 aa13.64□□□□□ -0.23
CCHCR1-212ENST00000475684 CNOT7Q9UIV1 285 aaKnown RBP13.64□□□□□ -0.23
CCHCR1-212ENST00000475684 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-212ENST00000475684 H7C1D1 291 aa13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 PPEF1O14829 653 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 TBC1D8O95759 1140 aa13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 TEFQ10587 303 aa13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 TNIP1Q15025 636 aa13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 KRT26Q7Z3Y9 468 aa13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 TMX4Q9H1E5 349 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 MKI67P46013 3256 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-212ENST00000475684 RAD17O75943 681 aa13.62□□□□□ -0.23
CCHCR1-212ENST00000475684 HOXA10P31260 410 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-212ENST00000475684 SHTN1A0MZ66 631 aa13.61□□□□□ -0.23
CCHCR1-212ENST00000475684 ADM5C9JUS6 153 aa13.61□□□□□ -0.23
CCHCR1-212ENST00000475684 HMOX1P09601 288 aa13.61□□□□□ -0.23
CCHCR1-212ENST00000475684 RBM17Q96I25 401 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-212ENST00000475684 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
CCHCR1-212ENST00000475684 NUTM1Q86Y26 1132 aa13.6□□□□□ -0.23
CCHCR1-212ENST00000475684 MICALL2Q8IY33 904 aa13.6□□□□□ -0.23
CCHCR1-212ENST00000475684 SUPT20HQ8NEM7 779 aa13.6□□□□□ -0.23
CCHCR1-212ENST00000475684 DCPSQ96C86 337 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-212ENST00000475684 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
CCHCR1-212ENST00000475684 USP16Q9Y5T5 823 aa13.6□□□□□ -0.23
CCHCR1-212ENST00000475684 GPR25O00155 361 aa13.59□□□□□ -0.23
CCHCR1-212ENST00000475684 HLFQ16534 295 aa13.59□□□□□ -0.23
CCHCR1-212ENST00000475684 SAMD7Q7Z3H4 446 aa13.59□□□□□ -0.23
CCHCR1-212ENST00000475684 MORC1Q86VD1 984 aa13.59□□□□□ -0.23
CCHCR1-212ENST00000475684 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
CCHCR1-212ENST00000475684 CRAMP1Q96RY5 1269 aa13.59□□□□□ -0.23
CCHCR1-212ENST00000475684 KIF7Q2M1P5 1343 aa13.59□□□□□ -0.23
CCHCR1-212ENST00000475684 ABCC12Q96J65 1359 aa13.58□□□□□ -0.23
CCHCR1-212ENST00000475684 SZT2Q5T011 3432 aa13.58□□□□□ -0.24
CCHCR1-212ENST00000475684 RGL2O15211 777 aa13.58□□□□□ -0.24
CCHCR1-212ENST00000475684 TBC1D10BQ4KMP7 808 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms