RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 NIP7Q9Y221 180 aaKnown RBP eCLIP18.81■□□□□ 0.6
FAM3A-218ENST00000475657 USP16Q9Y5T5 823 aa18.81■□□□□ 0.6
FAM3A-218ENST00000475657 CEMIPQ8WUJ3 1361 aa18.81■□□□□ 0.6
FAM3A-218ENST00000475657 TRPM7Q96QT4 1865 aa18.8■□□□□ 0.6
FAM3A-218ENST00000475657 DGKZQ13574 1117 aa18.79■□□□□ 0.6
FAM3A-218ENST00000475657 LARGE2Q8N3Y3 721 aa18.78■□□□□ 0.6
FAM3A-218ENST00000475657 ADARB2Q9NS39 739 aaKnown RBP18.78■□□□□ 0.6
FAM3A-218ENST00000475657 SIPA1L3O60292 1781 aaPredicted RBP18.78■□□□□ 0.6
FAM3A-218ENST00000475657 COL4A5P29400 1685 aa18.77■□□□□ 0.6
FAM3A-218ENST00000475657 BTBD11A6QL63 1104 aa18.77■□□□□ 0.6
FAM3A-218ENST00000475657 KCNQ3O43525 872 aa18.77■□□□□ 0.6
FAM3A-218ENST00000475657 HOXA10P31260 410 aaPredicted RBP18.77■□□□□ 0.6
FAM3A-218ENST00000475657 PGAP2Q9UHJ9 254 aa18.77■□□□□ 0.6
FAM3A-218ENST00000475657 CASP8AP2Q9UKL3 1982 aa18.77■□□□□ 0.59
FAM3A-218ENST00000475657 CELF2O95319 508 aaKnown RBP18.76■□□□□ 0.59
FAM3A-218ENST00000475657 SNRPA1P09661 255 aaKnown RBP18.76■□□□□ 0.59
FAM3A-218ENST00000475657 GTF2E1P29083 439 aaPredicted RBP18.76■□□□□ 0.59
FAM3A-218ENST00000475657 PIP4K2AP48426 406 aaPredicted RBP18.76■□□□□ 0.59
FAM3A-218ENST00000475657 VPS33BQ9H267 617 aa18.76■□□□□ 0.59
FAM3A-218ENST00000475657 GPRC5DQ9NZD1 345 aa18.76■□□□□ 0.59
FAM3A-218ENST00000475657 NOGQ13253 232 aa18.75■□□□□ 0.59
FAM3A-218ENST00000475657 NBPF26B4DH59 902 aa18.74■□□□□ 0.59
FAM3A-218ENST00000475657 CIAPIN1Q6FI81 312 aa18.74■□□□□ 0.59
FAM3A-218ENST00000475657 NBPF10Q6P3W6 841 aaKnown RBP18.74■□□□□ 0.59
FAM3A-218ENST00000475657 NIM1KQ8IY84 436 aa18.74■□□□□ 0.59
FAM3A-218ENST00000475657 NBPF15Q8N660 670 aa18.74■□□□□ 0.59
FAM3A-218ENST00000475657 ZC3H15Q8WU90 426 aaKnown RBP18.74■□□□□ 0.59
FAM3A-218ENST00000475657 NYXQ9GZU5 481 aa18.74■□□□□ 0.59
FAM3A-218ENST00000475657 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
FAM3A-218ENST00000475657 FAM177BA6PVY3 158 aa18.73■□□□□ 0.59
FAM3A-218ENST00000475657 PRAMEF22A3QJZ6 481 aa18.72■□□□□ 0.59
FAM3A-218ENST00000475657 PRPF38BQ5VTL8 546 aaKnown RBP18.72■□□□□ 0.59
FAM3A-218ENST00000475657 CRAMP1Q96RY5 1269 aa18.72■□□□□ 0.59
FAM3A-218ENST00000475657 RIC1Q4ADV7 1423 aa18.72■□□□□ 0.59
FAM3A-218ENST00000475657 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
FAM3A-218ENST00000475657 HLFQ16534 295 aa18.71■□□□□ 0.59
FAM3A-218ENST00000475657 RPGRQ92834 1020 aaKnown RBP18.71■□□□□ 0.59
FAM3A-218ENST00000475657 GLIS2Q9BZE0 524 aaPredicted RBP18.71■□□□□ 0.59
FAM3A-218ENST00000475657 ABCC12Q96J65 1359 aa18.7■□□□□ 0.58
FAM3A-218ENST00000475657 CDC37L1Q7L3B6 337 aa18.7■□□□□ 0.58
FAM3A-218ENST00000475657 SAGE1Q9NXZ1 904 aa18.7■□□□□ 0.58
FAM3A-218ENST00000475657 ZNRF3Q9ULT6 936 aa18.7■□□□□ 0.58
FAM3A-218ENST00000475657 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
FAM3A-218ENST00000475657 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
FAM3A-218ENST00000475657 PPIP5K2O43314 1243 aa18.69■□□□□ 0.58
FAM3A-218ENST00000475657 CXCL9Q07325 125 aa18.69■□□□□ 0.58
FAM3A-218ENST00000475657 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
FAM3A-218ENST00000475657 U2SURPO15042 1029 aaKnown RBP18.68■□□□□ 0.58
FAM3A-218ENST00000475657 NUTM1Q86Y26 1132 aa18.68■□□□□ 0.58
FAM3A-218ENST00000475657 RBM17Q96I25 401 aaKnown RBP18.68■□□□□ 0.58
FAM3A-218ENST00000475657 PPEF1O14829 653 aaPredicted RBP18.67■□□□□ 0.58
FAM3A-218ENST00000475657 GMPSP49915 693 aaPredicted RBP18.67■□□□□ 0.58
FAM3A-218ENST00000475657 COL3A1P02461 1466 aaPredicted RBP18.66■□□□□ 0.58
FAM3A-218ENST00000475657 SUPT20HQ8NEM7 779 aa18.66■□□□□ 0.58
FAM3A-218ENST00000475657 PHACTR3Q96KR7 559 aa18.66■□□□□ 0.58
FAM3A-218ENST00000475657 ZIC5Q96T25 663 aa18.66■□□□□ 0.58
FAM3A-218ENST00000475657 RTFDC1Q9BY42 306 aaPredicted RBP18.66■□□□□ 0.58
FAM3A-218ENST00000475657 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
FAM3A-218ENST00000475657 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
FAM3A-218ENST00000475657 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
FAM3A-218ENST00000475657 SOX10P56693 466 aa18.65■□□□□ 0.58
FAM3A-218ENST00000475657 HUNKP57058 714 aa18.65■□□□□ 0.58
FAM3A-218ENST00000475657 AOC3Q16853 763 aa18.65■□□□□ 0.58
FAM3A-218ENST00000475657 ZNF408Q9H9D4 720 aa18.65■□□□□ 0.58
FAM3A-218ENST00000475657 ATP6V0A2Q9Y487 856 aa18.65■□□□□ 0.58
FAM3A-218ENST00000475657 CCDC102AQ96A19 550 aa18.64■□□□□ 0.57
FAM3A-218ENST00000475657 FAM155AB1AL88 458 aaPredicted RBP18.63■□□□□ 0.57
FAM3A-218ENST00000475657 CNGB1Q14028 1251 aaPredicted RBP18.63■□□□□ 0.57
FAM3A-218ENST00000475657 TNIP1Q15025 636 aa18.63■□□□□ 0.57
FAM3A-218ENST00000475657 RGMBQ6NW40 437 aa18.63■□□□□ 0.57
FAM3A-218ENST00000475657 RTF1Q92541 710 aaKnown RBP18.63■□□□□ 0.57
FAM3A-218ENST00000475657 MAP3K15Q6ZN16 1313 aa18.63■□□□□ 0.57
FAM3A-218ENST00000475657 PRKAR2BP31323 418 aa18.62■□□□□ 0.57
FAM3A-218ENST00000475657 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
FAM3A-218ENST00000475657 TCERG1O14776 1098 aaKnown RBP18.61■□□□□ 0.57
FAM3A-218ENST00000475657 KIAA2012Q0VF49 1180 aa18.61■□□□□ 0.57
FAM3A-218ENST00000475657 SUSD4Q5VX71 490 aa18.61■□□□□ 0.57
FAM3A-218ENST00000475657 SLC51AQ86UW1 340 aa18.61■□□□□ 0.57
FAM3A-218ENST00000475657 TRPM4Q8TD43 1214 aa18.61■□□□□ 0.57
FAM3A-218ENST00000475657 RSPH6AQ9H0K4 717 aa18.61■□□□□ 0.57
FAM3A-218ENST00000475657 CNOT7Q9UIV1 285 aaKnown RBP18.61■□□□□ 0.57
FAM3A-218ENST00000475657 UBN2Q6ZU65 1347 aa18.6■□□□□ 0.57
FAM3A-218ENST00000475657 H7C1D1 291 aa18.6■□□□□ 0.57
FAM3A-218ENST00000475657 HTATSF1O43719 755 aaKnown RBP18.6■□□□□ 0.57
FAM3A-218ENST00000475657 CC2D1BQ5T0F9 858 aaKnown RBP18.6■□□□□ 0.57
FAM3A-218ENST00000475657 CTU1Q7Z7A3 348 aaKnown RBP18.6■□□□□ 0.57
FAM3A-218ENST00000475657 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
FAM3A-218ENST00000475657 ZNF34Q8IZ26 560 aa18.6■□□□□ 0.57
FAM3A-218ENST00000475657 NLRP3Q96P20 1036 aa18.6■□□□□ 0.57
FAM3A-218ENST00000475657 RNF186Q9NXI6 227 aa18.6■□□□□ 0.57
FAM3A-218ENST00000475657 BBOX1O75936 387 aa18.59■□□□□ 0.57
FAM3A-218ENST00000475657 NTSR2O95665 410 aa18.59■□□□□ 0.57
FAM3A-218ENST00000475657 KIF23Q02241 960 aaPredicted RBP18.59■□□□□ 0.57
FAM3A-218ENST00000475657 SLC10A5Q5PT55 438 aa18.59■□□□□ 0.57
FAM3A-218ENST00000475657 KIF6Q6ZMV9 814 aa18.59■□□□□ 0.57
FAM3A-218ENST00000475657 MCM10Q7L590 875 aa18.59■□□□□ 0.57
FAM3A-218ENST00000475657 TRPA1O75762 1119 aa18.58■□□□□ 0.56
FAM3A-218ENST00000475657 GPTP24298 496 aa18.58■□□□□ 0.56
FAM3A-218ENST00000475657 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.56
FAM3A-218ENST00000475657 DPP8Q6V1X1 898 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms