RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CHMP3Q9Y3E7 222 aa18.69■□□□□ 0.58
RPUSD3-215ENST00000475470 PRIM1P49642 420 aaKnown RBP18.69■□□□□ 0.58
RPUSD3-215ENST00000475470 FOXO4P98177 505 aa18.69■□□□□ 0.58
RPUSD3-215ENST00000475470 ARXQ96QS3 562 aa18.69■□□□□ 0.58
RPUSD3-215ENST00000475470 NRAPQ86VF7 1730 aa18.68■□□□□ 0.58
RPUSD3-215ENST00000475470 TCIRG1Q13488 830 aa18.68■□□□□ 0.58
RPUSD3-215ENST00000475470 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
RPUSD3-215ENST00000475470 EPB41L2O43491 1005 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-215ENST00000475470 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
RPUSD3-215ENST00000475470 ISCA1Q9BUE6 129 aa18.67■□□□□ 0.58
RPUSD3-215ENST00000475470 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
RPUSD3-215ENST00000475470 SGSM2O43147 1006 aa18.66■□□□□ 0.58
RPUSD3-215ENST00000475470 DDIT3P35638 169 aa18.66■□□□□ 0.58
RPUSD3-215ENST00000475470 IL25Q9H293 177 aa18.66■□□□□ 0.58
RPUSD3-215ENST00000475470 DIAPH3Q9NSV4 1193 aa18.66■□□□□ 0.58
RPUSD3-215ENST00000475470 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
RPUSD3-215ENST00000475470 TFCP2Q12800 502 aa18.66■□□□□ 0.58
RPUSD3-215ENST00000475470 CWC27Q6UX04 472 aaKnown RBP18.66■□□□□ 0.58
RPUSD3-215ENST00000475470 CYP19A1P11511 503 aaPredicted RBP18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 ANAPC15P60006 121 aa18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 RUFY2Q8WXA3 655 aa18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 SLC4A9Q96Q91 983 aa18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 TJP1Q07157 1748 aa18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 A0A0G2JS52 829 aa18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 CIZ1Q9ULV3 898 aaPredicted RBP18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
RPUSD3-215ENST00000475470 TNNI3KQ59H18 835 aa18.64■□□□□ 0.58
RPUSD3-215ENST00000475470 KIAA1211Q6ZU35 1233 aa18.64■□□□□ 0.58
RPUSD3-215ENST00000475470 FPGT-TNNI3KV9GXZ4 949 aa18.64■□□□□ 0.58
RPUSD3-215ENST00000475470 TRIM28Q13263 835 aaKnown RBP18.64■□□□□ 0.57
RPUSD3-215ENST00000475470 PALD1Q9ULE6 856 aa18.64■□□□□ 0.57
RPUSD3-215ENST00000475470 MAP3K15Q6ZN16 1313 aa18.64■□□□□ 0.57
RPUSD3-215ENST00000475470 DOT1LQ8TEK3 1739 aa18.64■□□□□ 0.57
RPUSD3-215ENST00000475470 BOLA2Q9H3K6 86 aa18.63■□□□□ 0.57
RPUSD3-215ENST00000475470 NEK4P51957 841 aa18.63■□□□□ 0.57
RPUSD3-215ENST00000475470 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
RPUSD3-215ENST00000475470 GIGYF2Q6Y7W6 1299 aaKnown RBP18.62■□□□□ 0.57
RPUSD3-215ENST00000475470 HSPA4P34932 840 aa18.62■□□□□ 0.57
RPUSD3-215ENST00000475470 NWD2Q9ULI1 1742 aa18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 RAD50Q92878 1312 aa18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 HIP1O00291 1037 aa18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 BARGINQ6ZT62 677 aa18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 DBNLQ9UJU6 430 aaKnown RBP18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 ZBTB1Q9Y2K1 713 aa18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 SLIT2O94813 1529 aa18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 LSG1Q9H089 658 aaKnown RBP18.61■□□□□ 0.57
RPUSD3-215ENST00000475470 PCCAP05165 728 aaPredicted RBP18.6■□□□□ 0.57
RPUSD3-215ENST00000475470 HSP90AB3PQ58FF7 597 aa18.6■□□□□ 0.57
RPUSD3-215ENST00000475470 HLFQ16534 295 aa18.6■□□□□ 0.57
RPUSD3-215ENST00000475470 IL17RAQ96F46 866 aa18.6■□□□□ 0.57
RPUSD3-215ENST00000475470 FSD1Q9BTV5 496 aa18.6■□□□□ 0.57
RPUSD3-215ENST00000475470 ATP5JP18859 108 aa18.59■□□□□ 0.57
RPUSD3-215ENST00000475470 IL15P40933 162 aaPredicted RBP18.59■□□□□ 0.57
RPUSD3-215ENST00000475470 MCM2P49736 904 aa18.59■□□□□ 0.57
RPUSD3-215ENST00000475470 ATG9AQ7Z3C6 839 aa18.59■□□□□ 0.57
RPUSD3-215ENST00000475470 ZBTB38Q8NAP3 1195 aaPredicted RBP18.59■□□□□ 0.57
RPUSD3-215ENST00000475470 FAM89AQ96GI7 184 aa18.59■□□□□ 0.57
RPUSD3-215ENST00000475470 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.59■□□□□ 0.57
RPUSD3-215ENST00000475470 MCM4P33991 863 aa18.59■□□□□ 0.57
RPUSD3-215ENST00000475470 GPTP24298 496 aa18.58■□□□□ 0.57
RPUSD3-215ENST00000475470 IL6STP40189 918 aaPredicted RBP18.58■□□□□ 0.57
RPUSD3-215ENST00000475470 CCDC57Q2TAC2 916 aa18.58■□□□□ 0.57
RPUSD3-215ENST00000475470 ZNF594Q96JF6 807 aaPredicted RBP18.58■□□□□ 0.57
RPUSD3-215ENST00000475470 DBNDD2Q9BQY9 259 aa18.58■□□□□ 0.57
RPUSD3-215ENST00000475470 EYA2O00167 538 aa18.58■□□□□ 0.56
RPUSD3-215ENST00000475470 RAB3GAP1Q15042 981 aa18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 DZIP3Q86Y13 1208 aaKnown RBP18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 CIAO1O76071 339 aa18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 GSE1Q14687 1217 aa18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 LRRC24Q50LG9 513 aa18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 NLRP10Q86W26 655 aa18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 NGLY1Q96IV0 654 aa18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 NEUROD6Q96NK8 337 aa18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 PLA2G12BQ9BX93 195 aa18.57■□□□□ 0.56
RPUSD3-215ENST00000475470 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
RPUSD3-215ENST00000475470 NMIQ13287 307 aaPredicted RBP18.56■□□□□ 0.56
RPUSD3-215ENST00000475470 TNPO1Q92973 898 aaKnown RBP18.56■□□□□ 0.56
RPUSD3-215ENST00000475470 C8orf37Q96NL8 207 aa18.56■□□□□ 0.56
RPUSD3-215ENST00000475470 GPR108Q9NPR9 543 aa18.56■□□□□ 0.56
RPUSD3-215ENST00000475470 TBC1D2BQ9UPU7 963 aa18.56■□□□□ 0.56
RPUSD3-215ENST00000475470 ERVV-1B6SEH8 477 aa18.55■□□□□ 0.56
RPUSD3-215ENST00000475470 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
RPUSD3-215ENST00000475470 FAM227BQ96M60 508 aa18.55■□□□□ 0.56
RPUSD3-215ENST00000475470 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
RPUSD3-215ENST00000475470 CWC22Q9HCG8 908 aaKnown RBP18.55■□□□□ 0.56
RPUSD3-215ENST00000475470 SNX14Q9Y5W7 946 aa18.55■□□□□ 0.56
RPUSD3-215ENST00000475470 PTH1RQ03431 593 aa18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 FAM98CQ17RN3 349 aaKnown RBP18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 CDHR2Q9BYE9 1310 aa18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 LOC102724428A0A0B4J2F2 783 aa18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 SIK1P57059 783 aa18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 TAF7LQ5H9L4 462 aa18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 EDC3Q96F86 508 aaKnown RBP18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 TMX3Q96JJ7 454 aa18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 CCDC85AQ96PX6 553 aaPredicted RBP18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
RPUSD3-215ENST00000475470 JCADQ9P266 1359 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms