RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 ERICH6BQ5W0A0 696 aa9.13□□□□□ -0.95
LSAMP-204ENST00000475403 TPTE2Q6XPS3 522 aa9.13□□□□□ -0.95
LSAMP-204ENST00000475403 NIM1KQ8IY84 436 aa9.13□□□□□ -0.95
LSAMP-204ENST00000475403 HHIPL1Q96JK4 782 aa9.13□□□□□ -0.95
LSAMP-204ENST00000475403 PSMD1Q99460 953 aa9.13□□□□□ -0.95
LSAMP-204ENST00000475403 ADARB2Q9NS39 739 aaKnown RBP9.13□□□□□ -0.95
LSAMP-204ENST00000475403 HMOX1P09601 288 aa9.12□□□□□ -0.95
LSAMP-204ENST00000475403 PIAS4Q8N2W9 510 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-204ENST00000475403 ZNF496Q96IT1 587 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-204ENST00000475403 FMNL2Q96PY5 1086 aa9.12□□□□□ -0.95
LSAMP-204ENST00000475403 TMX4Q9H1E5 349 aaPredicted RBP9.12□□□□□ -0.95
LSAMP-204ENST00000475403 NIP7Q9Y221 180 aaKnown RBP eCLIP9.12□□□□□ -0.95
LSAMP-204ENST00000475403 A1BGP04217 495 aa9.11□□□□□ -0.95
LSAMP-204ENST00000475403 IL13P35225 146 aa9.11□□□□□ -0.95
LSAMP-204ENST00000475403 HUNKP57058 714 aa9.11□□□□□ -0.95
LSAMP-204ENST00000475403 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
LSAMP-204ENST00000475403 ZNF790Q6PG37 636 aa9.11□□□□□ -0.95
LSAMP-204ENST00000475403 CLEC4GQ6UXB4 293 aa9.11□□□□□ -0.95
LSAMP-204ENST00000475403 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
LSAMP-204ENST00000475403 GLIS2Q9BZE0 524 aaPredicted RBP9.11□□□□□ -0.95
LSAMP-204ENST00000475403 SAGE1Q9NXZ1 904 aa9.11□□□□□ -0.95
LSAMP-204ENST00000475403 FANCIQ9NVI1 1328 aa9.1□□□□□ -0.95
LSAMP-204ENST00000475403 PPIP5K2O43314 1243 aa9.1□□□□□ -0.95
LSAMP-204ENST00000475403 MTHFSDQ2M296 383 aaKnown RBP9.1□□□□□ -0.95
LSAMP-204ENST00000475403 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
LSAMP-204ENST00000475403 GPRC5DQ9NZD1 345 aa9.1□□□□□ -0.95
LSAMP-204ENST00000475403 KLRG2A4D1S0 409 aaPredicted RBP9.09□□□□□ -0.95
LSAMP-204ENST00000475403 PIP4K2AP48426 406 aaPredicted RBP9.09□□□□□ -0.95
LSAMP-204ENST00000475403 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
LSAMP-204ENST00000475403 CTU1Q7Z7A3 348 aaKnown RBP9.09□□□□□ -0.95
LSAMP-204ENST00000475403 BCL2L13Q9BXK5 485 aa9.09□□□□□ -0.95
LSAMP-204ENST00000475403 COL4A5P29400 1685 aa9.09□□□□□ -0.95
LSAMP-204ENST00000475403 AKAP11Q9UKA4 1901 aa9.08□□□□□ -0.96
LSAMP-204ENST00000475403 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
LSAMP-204ENST00000475403 PPEF1O14829 653 aaPredicted RBP9.08□□□□□ -0.96
LSAMP-204ENST00000475403 TRPA1O75762 1119 aa9.08□□□□□ -0.96
LSAMP-204ENST00000475403 NYXQ9GZU5 481 aa9.08□□□□□ -0.96
LSAMP-204ENST00000475403 GMPSP49915 693 aaPredicted RBP9.07□□□□□ -0.96
LSAMP-204ENST00000475403 ZNF157P51786 506 aaPredicted RBP9.07□□□□□ -0.96
LSAMP-204ENST00000475403 AOC3Q16853 763 aa9.07□□□□□ -0.96
LSAMP-204ENST00000475403 RGMBQ6NW40 437 aa9.07□□□□□ -0.96
LSAMP-204ENST00000475403 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
LSAMP-204ENST00000475403 ZIC5Q96T25 663 aa9.07□□□□□ -0.96
LSAMP-204ENST00000475403 PANK3Q9H999 370 aa9.07□□□□□ -0.96
LSAMP-204ENST00000475403 HDAC9Q9UKV0 1011 aa9.07□□□□□ -0.96
LSAMP-204ENST00000475403 NPC1L1Q9UHC9 1359 aa9.07□□□□□ -0.96
LSAMP-204ENST00000475403 CDHR2Q9BYE9 1310 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 BTBD11A6QL63 1104 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 GNAT3A8MTJ3 354 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 C2orf69Q8N8R5 385 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 GAS2L2Q8NHY3 880 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 CCDC102AQ96A19 550 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 RBM17Q96I25 401 aaKnown RBP9.06□□□□□ -0.96
LSAMP-204ENST00000475403 RNF186Q9NXI6 227 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 HPS5Q9UPZ3 1129 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 KNSTRNQ9Y448 316 aa9.06□□□□□ -0.96
LSAMP-204ENST00000475403 SNED1Q8TER0 1413 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 SIPA1L3O60292 1781 aaPredicted RBP9.05□□□□□ -0.96
LSAMP-204ENST00000475403 ABCC12Q96J65 1359 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 H7C1D1 291 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 KIF23Q02241 960 aaPredicted RBP9.05□□□□□ -0.96
LSAMP-204ENST00000475403 TNIP1Q15025 636 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 PKN2Q16513 984 aaKnown RBP9.05□□□□□ -0.96
LSAMP-204ENST00000475403 CRY2Q49AN0 593 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 HABP4Q5JVS0 413 aaKnown RBP9.05□□□□□ -0.96
LSAMP-204ENST00000475403 USP48Q86UV5 1035 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 SUPT20HQ8NEM7 779 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 GBA2Q9HCG7 927 aaPredicted RBP9.05□□□□□ -0.96
LSAMP-204ENST00000475403 ZNRF3Q9ULT6 936 aa9.05□□□□□ -0.96
LSAMP-204ENST00000475403 RGL2O15211 777 aa9.04□□□□□ -0.96
LSAMP-204ENST00000475403 DIAPH1O60610 1272 aaKnown RBP9.04□□□□□ -0.96
LSAMP-204ENST00000475403 SNRPA1P09661 255 aaKnown RBP9.04□□□□□ -0.96
LSAMP-204ENST00000475403 CXCL9Q07325 125 aa9.04□□□□□ -0.96
LSAMP-204ENST00000475403 KRT26Q7Z3Y9 468 aa9.04□□□□□ -0.96
LSAMP-204ENST00000475403 TRPM4Q8TD43 1214 aa9.04□□□□□ -0.96
LSAMP-204ENST00000475403 VPS33BQ9H267 617 aa9.04□□□□□ -0.96
LSAMP-204ENST00000475403 RBM19Q9Y4C8 960 aaKnown RBP9.04□□□□□ -0.96
LSAMP-204ENST00000475403 USP16Q9Y5T5 823 aa9.04□□□□□ -0.96
LSAMP-204ENST00000475403 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-204ENST00000475403 U2SURPO15042 1029 aaKnown RBP9.03□□□□□ -0.96
LSAMP-204ENST00000475403 RAD17O75943 681 aa9.03□□□□□ -0.96
LSAMP-204ENST00000475403 DPP8Q6V1X1 898 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-204ENST00000475403 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
LSAMP-204ENST00000475403 MICALL2Q8IY33 904 aa9.03□□□□□ -0.96
LSAMP-204ENST00000475403 IL17REQ8NFR9 667 aa9.03□□□□□ -0.96
LSAMP-204ENST00000475403 DCPSQ96C86 337 aaKnown RBP9.03□□□□□ -0.96
LSAMP-204ENST00000475403 PGAP2Q9UHJ9 254 aa9.03□□□□□ -0.96
LSAMP-204ENST00000475403 CNOT7Q9UIV1 285 aaKnown RBP9.03□□□□□ -0.96
LSAMP-204ENST00000475403 RIC1Q4ADV7 1423 aa9.03□□□□□ -0.96
LSAMP-204ENST00000475403 KIF7Q2M1P5 1343 aa9.03□□□□□ -0.96
LSAMP-204ENST00000475403 PRAMEF22A3QJZ6 481 aa9.02□□□□□ -0.97
LSAMP-204ENST00000475403 KCNQ3O43525 872 aa9.02□□□□□ -0.97
LSAMP-204ENST00000475403 SLC10A3P09131 477 aa9.02□□□□□ -0.97
LSAMP-204ENST00000475403 HOXA10P31260 410 aaPredicted RBP9.02□□□□□ -0.97
LSAMP-204ENST00000475403 HLFQ16534 295 aa9.02□□□□□ -0.97
LSAMP-204ENST00000475403 REM2Q8IYK8 340 aaPredicted RBP9.02□□□□□ -0.97
LSAMP-204ENST00000475403 NGEFQ8N5V2 710 aa9.02□□□□□ -0.97
LSAMP-204ENST00000475403 CRAMP1Q96RY5 1269 aa9.02□□□□□ -0.97
LSAMP-204ENST00000475403 GPTP24298 496 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms