RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 ANKRD36CQ5JPF3 1778 aa25.25■■□□□ 1.63
EDEM3-206ENST00000474725 AMIGO3Q86WK7 504 aa25.25■■□□□ 1.63
EDEM3-206ENST00000474725 AK7Q96M32 723 aa25.24■■□□□ 1.63
EDEM3-206ENST00000474725 CHD1LQ86WJ1 897 aa25.24■■□□□ 1.63
EDEM3-206ENST00000474725 LNPKQ9C0E8 428 aa25.22■■□□□ 1.63
EDEM3-206ENST00000474725 EXOC6BQ9Y2D4 811 aa25.22■■□□□ 1.63
EDEM3-206ENST00000474725 UBN2Q6ZU65 1347 aa25.22■■□□□ 1.63
EDEM3-206ENST00000474725 PCCAP05165 728 aaPredicted RBP25.22■■□□□ 1.63
EDEM3-206ENST00000474725 RBM19Q9Y4C8 960 aaKnown RBP25.22■■□□□ 1.63
EDEM3-206ENST00000474725 BCORQ6W2J9 1755 aa25.21■■□□□ 1.63
EDEM3-206ENST00000474725 PDE4AP27815 886 aa25.21■■□□□ 1.63
EDEM3-206ENST00000474725 ZBTB38Q8NAP3 1195 aaPredicted RBP25.21■■□□□ 1.63
EDEM3-206ENST00000474725 ARHGEF1Q92888 912 aaKnown RBP25.21■■□□□ 1.63
EDEM3-206ENST00000474725 FAM89AQ96GI7 184 aa25.21■■□□□ 1.63
EDEM3-206ENST00000474725 TNS1Q9HBL0 1735 aaKnown RBP25.21■■□□□ 1.63
EDEM3-206ENST00000474725 APBB1O00213 710 aa25.2■■□□□ 1.62
EDEM3-206ENST00000474725 NARFQ9UHQ1 456 aa25.2■■□□□ 1.62
EDEM3-206ENST00000474725 ZNF652Q9Y2D9 606 aa25.2■■□□□ 1.62
EDEM3-206ENST00000474725 PHF14O94880 888 aa25.2■■□□□ 1.62
EDEM3-206ENST00000474725 FOXO4P98177 505 aa25.2■■□□□ 1.62
EDEM3-206ENST00000474725 CLEC4GQ6UXB4 293 aa25.2■■□□□ 1.62
EDEM3-206ENST00000474725 SRP68Q9UHB9 627 aaKnown RBP25.2■■□□□ 1.62
EDEM3-206ENST00000474725 RABL6Q3YEC7 729 aaPredicted RBP25.19■■□□□ 1.62
EDEM3-206ENST00000474725 TRAPPC3LQ5T215 181 aa25.19■■□□□ 1.62
EDEM3-206ENST00000474725 USPL1Q5W0Q7 1092 aa25.19■■□□□ 1.62
EDEM3-206ENST00000474725 SYNE4Q8N205 404 aa25.18■■□□□ 1.62
EDEM3-206ENST00000474725 BCL2L12Q9HB09 334 aa25.18■■□□□ 1.62
EDEM3-206ENST00000474725 TRMT112Q9UI30 125 aaKnown RBP25.18■■□□□ 1.62
EDEM3-206ENST00000474725 SURF6O75683 361 aaKnown RBP25.18■■□□□ 1.62
EDEM3-206ENST00000474725 SUSD4Q5VX71 490 aa25.18■■□□□ 1.62
EDEM3-206ENST00000474725 NIP7Q9Y221 180 aaKnown RBP eCLIP25.18■■□□□ 1.62
EDEM3-206ENST00000474725 ZPR1O75312 459 aa25.17■■□□□ 1.62
EDEM3-206ENST00000474725 SCN7AQ01118 1682 aa25.16■■□□□ 1.62
EDEM3-206ENST00000474725 RGL2O15211 777 aa25.16■■□□□ 1.62
EDEM3-206ENST00000474725 SMARCA5O60264 1052 aaPredicted RBP25.16■■□□□ 1.62
EDEM3-206ENST00000474725 LMBR1LQ6UX01 489 aa25.16■■□□□ 1.62
EDEM3-206ENST00000474725 PARP10Q53GL7 1025 aa25.16■■□□□ 1.62
EDEM3-206ENST00000474725 PA2G4Q9UQ80 394 aaKnown RBP25.16■■□□□ 1.62
EDEM3-206ENST00000474725 CDHR2Q9BYE9 1310 aa25.15■■□□□ 1.62
EDEM3-206ENST00000474725 FAM177BA6PVY3 158 aa25.15■■□□□ 1.62
EDEM3-206ENST00000474725 HMGB2P26583 209 aaKnown RBP25.15■■□□□ 1.62
EDEM3-206ENST00000474725 RFC4P35249 363 aa25.15■■□□□ 1.62
EDEM3-206ENST00000474725 ZBTB47Q9UFB7 747 aaPredicted RBP25.15■■□□□ 1.62
EDEM3-206ENST00000474725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.14■■□□□ 1.62
EDEM3-206ENST00000474725 ADRA2BP18089 450 aa25.14■■□□□ 1.62
EDEM3-206ENST00000474725 BCL11AQ9H165 835 aa25.14■■□□□ 1.62
EDEM3-206ENST00000474725 NOP58Q9Y2X3 529 aaKnown RBP25.14■■□□□ 1.62
EDEM3-206ENST00000474725 UBR3Q6ZT12 1888 aa25.14■■□□□ 1.62
EDEM3-206ENST00000474725 UTP14AQ9BVJ6 771 aaKnown RBP25.14■■□□□ 1.61
EDEM3-206ENST00000474725 PLA2G12BQ9BX93 195 aa25.14■■□□□ 1.61
EDEM3-206ENST00000474725 USP42Q9H9J4 1324 aaKnown RBP25.13■■□□□ 1.61
EDEM3-206ENST00000474725 RAB11FIP3O75154 756 aa25.13■■□□□ 1.61
EDEM3-206ENST00000474725 TBC1D9BQ66K14 1250 aa25.13■■□□□ 1.61
EDEM3-206ENST00000474725 LRRCC1Q9C099 1032 aa25.13■■□□□ 1.61
EDEM3-206ENST00000474725 C4AP0C0L4 1744 aa25.13■■□□□ 1.61
EDEM3-206ENST00000474725 IRS4O14654 1257 aaPredicted RBP25.12■■□□□ 1.61
EDEM3-206ENST00000474725 RFX5P48382 616 aaPredicted RBP25.12■■□□□ 1.61
EDEM3-206ENST00000474725 C16orf71Q8IYS4 520 aaPredicted RBP25.12■■□□□ 1.61
EDEM3-206ENST00000474725 CHMP3Q9Y3E7 222 aa25.12■■□□□ 1.61
EDEM3-206ENST00000474725 BICDL1Q6ZP65 573 aa25.12■■□□□ 1.61
EDEM3-206ENST00000474725 SSFA2P28290 1259 aa25.11■■□□□ 1.61
EDEM3-206ENST00000474725 HSP90AB4PQ58FF6 505 aa25.11■■□□□ 1.61
EDEM3-206ENST00000474725 KLHDC4Q8TBB5 520 aa25.11■■□□□ 1.61
EDEM3-206ENST00000474725 NTSR2O95665 410 aa25.1■■□□□ 1.61
EDEM3-206ENST00000474725 ZNF827Q17R98 1081 aa25.1■■□□□ 1.61
EDEM3-206ENST00000474725 SH3TC1Q8TE82 1336 aa25.1■■□□□ 1.61
EDEM3-206ENST00000474725 RGPD3A6NKT7 1758 aaPredicted RBP25.1■■□□□ 1.61
EDEM3-206ENST00000474725 RGPD4Q7Z3J3 1758 aa25.1■■□□□ 1.61
EDEM3-206ENST00000474725 AKT1S1Q96B36 256 aa25.1■■□□□ 1.61
EDEM3-206ENST00000474725 PTPN12Q05209 780 aaKnown RBP25.09■■□□□ 1.61
EDEM3-206ENST00000474725 EN1Q05925 392 aaPredicted RBP25.09■■□□□ 1.61
EDEM3-206ENST00000474725 OS9Q13438 667 aaPredicted RBP25.09■■□□□ 1.61
EDEM3-206ENST00000474725 RHPN1Q8TCX5 695 aa25.09■■□□□ 1.61
EDEM3-206ENST00000474725 CSF1RP07333 972 aa25.08■■□□□ 1.61
EDEM3-206ENST00000474725 EZH2Q15910 746 aaKnown RBP25.08■■□□□ 1.61
EDEM3-206ENST00000474725 CAMKK2Q96RR4 588 aa25.08■■□□□ 1.61
EDEM3-206ENST00000474725 COPRSQ9NQ92 184 aa25.08■■□□□ 1.61
EDEM3-206ENST00000474725 KIF1BPQ96EK5 621 aa25.08■■□□□ 1.6
EDEM3-206ENST00000474725 SIL1Q9H173 461 aa25.08■■□□□ 1.6
EDEM3-206ENST00000474725 PDE8AO60658 829 aa25.07■■□□□ 1.6
EDEM3-206ENST00000474725 G3BP1Q13283 466 aaKnown RBP eCLIP25.07■■□□□ 1.6
EDEM3-206ENST00000474725 NUTM1Q86Y26 1132 aa25.07■■□□□ 1.6
EDEM3-206ENST00000474725 OTUD7AQ8TE49 926 aaPredicted RBP25.07■■□□□ 1.6
EDEM3-206ENST00000474725 SETDB2Q96T68 719 aa25.07■■□□□ 1.6
EDEM3-206ENST00000474725 TFCP2L1Q9NZI6 479 aa25.07■■□□□ 1.6
EDEM3-206ENST00000474725 HCLS1P14317 486 aaPredicted RBP25.06■■□□□ 1.6
EDEM3-206ENST00000474725 CTSWP56202 376 aa25.06■■□□□ 1.6
EDEM3-206ENST00000474725 CCDC85AQ96PX6 553 aaPredicted RBP25.06■■□□□ 1.6
EDEM3-206ENST00000474725 IL1RAPL2Q9NP60 686 aa25.06■■□□□ 1.6
EDEM3-206ENST00000474725 PLEKHM2Q8IWE5 1019 aa25.06■■□□□ 1.6
EDEM3-206ENST00000474725 TTLL11Q8NHH1 800 aa25.06■■□□□ 1.6
EDEM3-206ENST00000474725 SF3B2Q13435 895 aaKnown RBP25.04■■□□□ 1.6
EDEM3-206ENST00000474725 FAM161AQ3B820 660 aa25.04■■□□□ 1.6
EDEM3-206ENST00000474725 ERC1Q8IUD2 1116 aa25.04■■□□□ 1.6
EDEM3-206ENST00000474725 SASH1O94885 1247 aa25.04■■□□□ 1.6
EDEM3-206ENST00000474725 GYS1P13807 737 aa25.04■■□□□ 1.6
EDEM3-206ENST00000474725 CCDC57Q2TAC2 916 aa25.03■■□□□ 1.6
EDEM3-206ENST00000474725 ERFEQ4G0M1 354 aa25.03■■□□□ 1.6
EDEM3-206ENST00000474725 ZNF594Q96JF6 807 aaPredicted RBP25.03■■□□□ 1.6
EDEM3-206ENST00000474725 NFIXQ14938 502 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms