RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 DNTTIP2Q5QJE6 756 aaKnown RBP16.79■□□□□ 0.28
RPGR-206ENST00000474584 RNF20Q5VTR2 975 aa16.79■□□□□ 0.28
RPGR-206ENST00000474584 PIBF1Q8WXW3 757 aa16.79■□□□□ 0.28
RPGR-206ENST00000474584 MAP4K1Q92918 833 aa16.79■□□□□ 0.28
RPGR-206ENST00000474584 KDM4AO75164 1064 aa16.79■□□□□ 0.28
RPGR-206ENST00000474584 NMIQ13287 307 aaPredicted RBP16.79■□□□□ 0.28
RPGR-206ENST00000474584 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
RPGR-206ENST00000474584 FUCA2Q9BTY2 467 aa16.79■□□□□ 0.28
RPGR-206ENST00000474584 UTYO14607 1347 aa16.78■□□□□ 0.28
RPGR-206ENST00000474584 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
RPGR-206ENST00000474584 PDCP20941 246 aa16.78■□□□□ 0.28
RPGR-206ENST00000474584 ANKRD1Q15327 319 aa16.78■□□□□ 0.28
RPGR-206ENST00000474584 GIMAP6Q6P9H5 292 aa16.78■□□□□ 0.28
RPGR-206ENST00000474584 SUCLG2Q96I99 432 aa16.78■□□□□ 0.28
RPGR-206ENST00000474584 FAM227BQ96M60 508 aa16.78■□□□□ 0.28
RPGR-206ENST00000474584 BICC1Q9H694 974 aaKnown RBP16.78■□□□□ 0.28
RPGR-206ENST00000474584 SASH1O94885 1247 aa16.77■□□□□ 0.28
RPGR-206ENST00000474584 KRT85P78386 507 aa16.77■□□□□ 0.28
RPGR-206ENST00000474584 ST3GAL1Q11201 340 aa16.77■□□□□ 0.28
RPGR-206ENST00000474584 MTERF4Q7Z6M4 381 aaKnown RBP16.77■□□□□ 0.28
RPGR-206ENST00000474584 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
RPGR-206ENST00000474584 SNRKQ9NRH2 765 aa16.77■□□□□ 0.28
RPGR-206ENST00000474584 LARP1BQ659C4 914 aaKnown RBP16.77■□□□□ 0.27
RPGR-206ENST00000474584 NECAB1Q8N987 351 aa16.77■□□□□ 0.27
RPGR-206ENST00000474584 EAF2Q96CJ1 260 aaPredicted RBP16.77■□□□□ 0.27
RPGR-206ENST00000474584 FSD1Q9BTV5 496 aa16.77■□□□□ 0.27
RPGR-206ENST00000474584 TPCN1Q9ULQ1 816 aa16.77■□□□□ 0.27
RPGR-206ENST00000474584 SLC27A2O14975 620 aa16.76■□□□□ 0.27
RPGR-206ENST00000474584 CCDC192P0DO97 292 aa16.76■□□□□ 0.27
RPGR-206ENST00000474584 BLOC1S2Q6QNY1 142 aa16.76■□□□□ 0.27
RPGR-206ENST00000474584 DDX21Q9NR30 783 aaKnown RBP eCLIP16.76■□□□□ 0.27
RPGR-206ENST00000474584 ADAMTS7Q9UKP4 1686 aa16.76■□□□□ 0.27
RPGR-206ENST00000474584 SLIT3O75094 1523 aa16.76■□□□□ 0.27
RPGR-206ENST00000474584 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
RPGR-206ENST00000474584 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
RPGR-206ENST00000474584 LMTK3Q96Q04 1460 aa16.76■□□□□ 0.27
RPGR-206ENST00000474584 PRAMEF22A3QJZ6 481 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 PLCB2Q00722 1185 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 MPNDQ8N594 471 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 ZNF830Q96NB3 372 aaPredicted RBP16.75■□□□□ 0.27
RPGR-206ENST00000474584 ELP1O95163 1332 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 GCP02774 474 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 AIMP1Q12904 312 aaKnown RBP16.75■□□□□ 0.27
RPGR-206ENST00000474584 NOLC1Q14978 699 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPGR-206ENST00000474584 ARHGEF25Q86VW2 580 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 TTC12Q9H892 705 aaPredicted RBP16.75■□□□□ 0.27
RPGR-206ENST00000474584 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
RPGR-206ENST00000474584 MED23Q9ULK4 1368 aa16.74■□□□□ 0.27
RPGR-206ENST00000474584 MRC1P22897 1456 aa16.74■□□□□ 0.27
RPGR-206ENST00000474584 A0A0D9SFI3 127 aa16.74■□□□□ 0.27
RPGR-206ENST00000474584 NEXNQ0ZGT2 675 aa16.74■□□□□ 0.27
RPGR-206ENST00000474584 PRIMPOLQ96LW4 560 aa16.74■□□□□ 0.27
RPGR-206ENST00000474584 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
RPGR-206ENST00000474584 NPHP4O75161 1426 aaPredicted RBP16.74■□□□□ 0.27
RPGR-206ENST00000474584 C5P01031 1676 aa16.74■□□□□ 0.27
RPGR-206ENST00000474584 DTNBO60941 627 aa16.73■□□□□ 0.27
RPGR-206ENST00000474584 TPM3P06753 285 aa16.73■□□□□ 0.27
RPGR-206ENST00000474584 HMGN5P82970 282 aaKnown RBP16.73■□□□□ 0.27
RPGR-206ENST00000474584 CDC37L1Q7L3B6 337 aa16.73■□□□□ 0.27
RPGR-206ENST00000474584 RIC3Q7Z5B4 369 aa16.73■□□□□ 0.27
RPGR-206ENST00000474584 SIL1Q9H173 461 aa16.73■□□□□ 0.27
RPGR-206ENST00000474584 TLR7Q9NYK1 1049 aaKnown RBP16.73■□□□□ 0.27
RPGR-206ENST00000474584 RPS6KB1P23443 525 aa16.73■□□□□ 0.27
RPGR-206ENST00000474584 LARP1Q6PKG0 1096 aaKnown RBP16.73■□□□□ 0.27
RPGR-206ENST00000474584 RBM33Q96EV2 1170 aaKnown RBP16.73■□□□□ 0.27
RPGR-206ENST00000474584 ALDH8A1Q9H2A2 487 aaPredicted RBP16.73■□□□□ 0.27
RPGR-206ENST00000474584 MAP3K11Q16584 847 aa16.72■□□□□ 0.27
RPGR-206ENST00000474584 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
RPGR-206ENST00000474584 MYRIPQ8NFW9 859 aa16.72■□□□□ 0.27
RPGR-206ENST00000474584 SCAND2PQ9GZW5 306 aaPredicted RBP16.72■□□□□ 0.27
RPGR-206ENST00000474584 NUP62CLQ9H1M0 184 aa16.72■□□□□ 0.27
RPGR-206ENST00000474584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
RPGR-206ENST00000474584 JCADQ9P266 1359 aa16.72■□□□□ 0.27
RPGR-206ENST00000474584 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
RPGR-206ENST00000474584 FERMT3Q86UX7 667 aa16.72■□□□□ 0.27
RPGR-206ENST00000474584 ANKLE2Q86XL3 938 aa16.72■□□□□ 0.27
RPGR-206ENST00000474584 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
RPGR-206ENST00000474584 SCN11AQ9UI33 1791 aa16.71■□□□□ 0.27
RPGR-206ENST00000474584 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.27
RPGR-206ENST00000474584 AFDNP55196 1824 aaKnown RBP16.71■□□□□ 0.27
RPGR-206ENST00000474584 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
RPGR-206ENST00000474584 IGKV5-2P06315 115 aa16.71■□□□□ 0.27
RPGR-206ENST00000474584 KRT32Q14532 448 aa16.71■□□□□ 0.27
RPGR-206ENST00000474584 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.27
RPGR-206ENST00000474584 PDIA6Q15084 440 aa16.7■□□□□ 0.26
RPGR-206ENST00000474584 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
RPGR-206ENST00000474584 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
RPGR-206ENST00000474584 NPHP3Q7Z494 1330 aa16.7■□□□□ 0.26
RPGR-206ENST00000474584 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
RPGR-206ENST00000474584 TOB2Q14106 344 aaPredicted RBP16.7■□□□□ 0.26
RPGR-206ENST00000474584 GCKRQ14397 625 aa16.69■□□□□ 0.26
RPGR-206ENST00000474584 LMOD2Q6P5Q4 547 aa16.69■□□□□ 0.26
RPGR-206ENST00000474584 ZNF589Q86UQ0 364 aaPredicted RBP16.69■□□□□ 0.26
RPGR-206ENST00000474584 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
RPGR-206ENST00000474584 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
RPGR-206ENST00000474584 ZNF142P52746 1687 aaPredicted RBP16.68■□□□□ 0.26
RPGR-206ENST00000474584 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
RPGR-206ENST00000474584 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms