RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 RGL2O15211 777 aa10.49□□□□□ -0.73
CNN3-205ENST00000474409 CLEC4GQ6UXB4 293 aa10.49□□□□□ -0.73
CNN3-205ENST00000474409 COL23A1Q86Y22 540 aaPredicted RBP10.49□□□□□ -0.73
CNN3-205ENST00000474409 MEIS3Q99687 375 aa10.49□□□□□ -0.73
CNN3-205ENST00000474409 ISCA1Q9BUE6 129 aa10.49□□□□□ -0.73
CNN3-205ENST00000474409 NIP7Q9Y221 180 aaKnown RBP eCLIP10.49□□□□□ -0.73
CNN3-205ENST00000474409 CARMIL3Q8ND23 1372 aa10.49□□□□□ -0.73
CNN3-205ENST00000474409 GRM8O00222 908 aa10.48□□□□□ -0.73
CNN3-205ENST00000474409 GNAI3P08754 354 aa10.48□□□□□ -0.73
CNN3-205ENST00000474409 UBTFL1P0CB47 393 aaPredicted RBP10.48□□□□□ -0.73
CNN3-205ENST00000474409 GCKRQ14397 625 aa10.48□□□□□ -0.73
CNN3-205ENST00000474409 PARP10Q53GL7 1025 aa10.48□□□□□ -0.73
CNN3-205ENST00000474409 BICDL1Q6ZP65 573 aa10.48□□□□□ -0.73
CNN3-205ENST00000474409 CCDC191Q8NCU4 936 aa10.48□□□□□ -0.73
CNN3-205ENST00000474409 BCL2L12Q9HB09 334 aa10.48□□□□□ -0.73
CNN3-205ENST00000474409 UBN2Q6ZU65 1347 aa10.48□□□□□ -0.73
CNN3-205ENST00000474409 FAM177BA6PVY3 158 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 NPHP1O15259 732 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 GYS1P13807 737 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 AAMPQ13685 434 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 TBC1D9BQ66K14 1250 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 UBE3BQ7Z3V4 1068 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 PPP1R42Q7Z4L9 355 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 NLRP10Q86W26 655 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 ZNF34Q8IZ26 560 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 C1orf115Q9H7X2 142 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 KIAA1551Q9HCM1 1747 aa10.47□□□□□ -0.73
CNN3-205ENST00000474409 ZBTB7BO15156 539 aaPredicted RBP10.46□□□□□ -0.73
CNN3-205ENST00000474409 TRIM28Q13263 835 aaKnown RBP10.46□□□□□ -0.73
CNN3-205ENST00000474409 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.73
CNN3-205ENST00000474409 SETDB2Q96T68 719 aa10.46□□□□□ -0.73
CNN3-205ENST00000474409 HDAC5Q9UQL6 1122 aa10.46□□□□□ -0.73
CNN3-205ENST00000474409 GTF3C3Q9Y5Q9 886 aa10.46□□□□□ -0.73
CNN3-205ENST00000474409 ARAP2Q8WZ64 1704 aa10.46□□□□□ -0.74
CNN3-205ENST00000474409 LRRC37AA6NMS7 1700 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 LRP5O75197 1615 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 UTYO14607 1347 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 SH3TC1Q8TE82 1336 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 GNAI2P04899 355 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 PCCAP05165 728 aaPredicted RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 NBPF7P0C2Y1 421 aaPredicted RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 GTF2E1P29083 439 aaPredicted RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 RTL5Q5HYW3 569 aaPredicted RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 MSL1Q68DK7 614 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 NBPF5PQ86XG9 351 aaPredicted RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 ZBTB38Q8NAP3 1195 aaPredicted RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 UTP14AQ9BVJ6 771 aaKnown RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 NYXQ9GZU5 481 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 USP44Q9H0E7 712 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 ZBTB40Q9NUA8 1239 aa10.45□□□□□ -0.74
CNN3-205ENST00000474409 TRMT112Q9UI30 125 aaKnown RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 LRRFIP2Q9Y608 721 aaKnown RBP10.45□□□□□ -0.74
CNN3-205ENST00000474409 ABCC12Q96J65 1359 aa10.44□□□□□ -0.74
CNN3-205ENST00000474409 CDHR2Q9BYE9 1310 aa10.44□□□□□ -0.74
CNN3-205ENST00000474409 NTSR2O95665 410 aa10.44□□□□□ -0.74
CNN3-205ENST00000474409 NFIXQ14938 502 aa10.44□□□□□ -0.74
CNN3-205ENST00000474409 R3HDM1Q15032 1099 aaKnown RBP10.44□□□□□ -0.74
CNN3-205ENST00000474409 SUSD4Q5VX71 490 aa10.44□□□□□ -0.74
CNN3-205ENST00000474409 NLGN1Q8N2Q7 840 aa10.44□□□□□ -0.74
CNN3-205ENST00000474409 CNBD1Q8NA66 436 aa10.44□□□□□ -0.74
CNN3-205ENST00000474409 JARID2Q92833 1246 aaPredicted RBP10.44□□□□□ -0.74
CNN3-205ENST00000474409 CCDC88AQ3V6T2 1871 aa10.44□□□□□ -0.74
CNN3-205ENST00000474409 RIC1Q4ADV7 1423 aa10.43□□□□□ -0.74
CNN3-205ENST00000474409 ARFGEF1Q9Y6D6 1849 aa10.43□□□□□ -0.74
CNN3-205ENST00000474409 PSDA5PKW4 1024 aaPredicted RBP10.43□□□□□ -0.74
CNN3-205ENST00000474409 ST5P78524 1137 aa10.43□□□□□ -0.74
CNN3-205ENST00000474409 NUTM1Q86Y26 1132 aa10.43□□□□□ -0.74
CNN3-205ENST00000474409 FAM89AQ96GI7 184 aa10.43□□□□□ -0.74
CNN3-205ENST00000474409 SUCLG2Q96I99 432 aa10.43□□□□□ -0.74
CNN3-205ENST00000474409 MYH7P12883 1935 aa10.43□□□□□ -0.74
CNN3-205ENST00000474409 H7C1W4 665 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 MMP10P09238 476 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 HSP90B1P14625 803 aaKnown RBP10.42□□□□□ -0.74
CNN3-205ENST00000474409 TPTE2Q6XPS3 522 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 SLC16A10Q8TF71 515 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 CCDC136Q96JN2 1154 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 PDGFDQ9GZP0 370 aaPredicted RBP10.42□□□□□ -0.74
CNN3-205ENST00000474409 PPP4R2Q9NY27 417 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 CHMP3Q9Y3E7 222 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 PARP3Q9Y6F1 533 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 CHD4Q14839 1912 aa10.42□□□□□ -0.74
CNN3-205ENST00000474409 POLRMTO00411 1230 aaKnown RBP10.41□□□□□ -0.74
CNN3-205ENST00000474409 IRS4O14654 1257 aaPredicted RBP10.41□□□□□ -0.74
CNN3-205ENST00000474409 HMMRO75330 724 aa10.41□□□□□ -0.74
CNN3-205ENST00000474409 SERPINB2P05120 415 aa10.41□□□□□ -0.74
CNN3-205ENST00000474409 CASP7P55210 303 aa10.41□□□□□ -0.74
CNN3-205ENST00000474409 DDR1Q08345 913 aa10.41□□□□□ -0.74
CNN3-205ENST00000474409 ERFEQ4G0M1 354 aa10.41□□□□□ -0.74
CNN3-205ENST00000474409 CEP85Q6P2H3 762 aa10.41□□□□□ -0.74
CNN3-205ENST00000474409 BICC1Q9H694 974 aaKnown RBP10.41□□□□□ -0.74
CNN3-205ENST00000474409 SLX4Q8IY92 1834 aa10.41□□□□□ -0.74
CNN3-205ENST00000474409 COL4A1P02462 1669 aa10.41□□□□□ -0.74
CNN3-205ENST00000474409 PDE8AO60658 829 aa10.4□□□□□ -0.74
CNN3-205ENST00000474409 ZBTB7AO95365 584 aa10.4□□□□□ -0.74
CNN3-205ENST00000474409 TM4SF1P30408 202 aa10.4□□□□□ -0.74
CNN3-205ENST00000474409 CTSWP56202 376 aa10.4□□□□□ -0.74
CNN3-205ENST00000474409 PRR5LQ6MZQ0 368 aa10.4□□□□□ -0.74
CNN3-205ENST00000474409 RPAP2Q8IXW5 612 aaPredicted RBP10.4□□□□□ -0.74
CNN3-205ENST00000474409 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
CNN3-205ENST00000474409 PLA2G12BQ9BX93 195 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms