RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SEMA3FQ13275 785 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 FZD5Q13467 585 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 SLC9A9Q8IVB4 645 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 DCAF11Q8TEB1 546 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 NUDT8Q8WV74 236 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 SNRKQ9NRH2 765 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 TBC1D2BQ9UPU7 963 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 RNF114Q9Y508 228 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 PCDHGA11Q9Y5H2 935 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 NOS3P29474 1203 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 SSTR4P31391 388 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 PSMA6P60900 246 aaKnown RBP5.59□□□□□ -1.51
CCDC39-203ENST00000473854 PSME1Q06323 249 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 MSL1Q68DK7 614 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 C7orf43Q8WVR3 580 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 PNMA5Q96PV4 448 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 ZNF358Q9NW07 568 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 FRRS1LQ9P0K9 344 aa5.59□□□□□ -1.51
CCDC39-203ENST00000473854 SFI1A8K8P3 1242 aa5.58□□□□□ -1.52
CCDC39-203ENST00000473854 TAL1P17542 331 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-203ENST00000473854 ILDR2Q71H61 639 aa5.58□□□□□ -1.52
CCDC39-203ENST00000473854 IGFLR1Q9H665 355 aa5.58□□□□□ -1.52
CCDC39-203ENST00000473854 DNAJB12Q9NXW2 375 aaKnown RBP5.58□□□□□ -1.52
CCDC39-203ENST00000473854 EPHA4P54764 986 aa5.57□□□□□ -1.52
CCDC39-203ENST00000473854 GTF2IP78347 998 aa5.57□□□□□ -1.52
CCDC39-203ENST00000473854 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
CCDC39-203ENST00000473854 WFDC8Q8IUA0 241 aa5.57□□□□□ -1.52
CCDC39-203ENST00000473854 KIAA1324LA8MWY0 1029 aaPredicted RBP5.56□□□□□ -1.52
CCDC39-203ENST00000473854 GP2P55259 537 aaKnown RBP5.56□□□□□ -1.52
CCDC39-203ENST00000473854 VAC14Q08AM6 782 aa5.56□□□□□ -1.52
CCDC39-203ENST00000473854 IRF5Q13568 498 aa5.56□□□□□ -1.52
CCDC39-203ENST00000473854 DZIP1LQ8IYY4 767 aaKnown RBP5.56□□□□□ -1.52
CCDC39-203ENST00000473854 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.56□□□□□ -1.52
CCDC39-203ENST00000473854 MEGF10Q96KG7 1140 aa5.56□□□□□ -1.52
CCDC39-203ENST00000473854 AKTIPQ9H8T0 292 aa5.56□□□□□ -1.52
CCDC39-203ENST00000473854 ARID4AP29374 1257 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-203ENST00000473854 GRIK1P39086 918 aa5.55□□□□□ -1.52
CCDC39-203ENST00000473854 FAM35AQ86V20 835 aa5.55□□□□□ -1.52
CCDC39-203ENST00000473854 NFATC2IPQ8NCF5 419 aa5.55□□□□□ -1.52
CCDC39-203ENST00000473854 IL27Q8NEV9 243 aa5.55□□□□□ -1.52
CCDC39-203ENST00000473854 TTC9Q92623 222 aa5.55□□□□□ -1.52
CCDC39-203ENST00000473854 HSH2DQ96JZ2 352 aa5.55□□□□□ -1.52
CCDC39-203ENST00000473854 SUSD3Q96L08 255 aa5.55□□□□□ -1.52
CCDC39-203ENST00000473854 PHACTR1Q9C0D0 580 aa5.55□□□□□ -1.52
CCDC39-203ENST00000473854 MRPL18Q9H0U6 180 aaKnown RBP5.55□□□□□ -1.52
CCDC39-203ENST00000473854 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-203ENST00000473854 EPB42P16452 691 aa5.54□□□□□ -1.52
CCDC39-203ENST00000473854 CCINQ13939 588 aa5.54□□□□□ -1.52
CCDC39-203ENST00000473854 INTS5Q6P9B9 1019 aaKnown RBP5.54□□□□□ -1.52
CCDC39-203ENST00000473854 POTEAQ6S8J7 498 aa5.54□□□□□ -1.52
CCDC39-203ENST00000473854 BTLAQ7Z6A9 289 aa5.54□□□□□ -1.52
CCDC39-203ENST00000473854 TRIM50Q86XT4 487 aa5.54□□□□□ -1.52
CCDC39-203ENST00000473854 SRA1Q9HD15 236 aaKnown RBP5.54□□□□□ -1.52
CCDC39-203ENST00000473854 NAGPAQ9UK23 515 aa5.54□□□□□ -1.52
CCDC39-203ENST00000473854 OAS3Q9Y6K5 1087 aaKnown RBP5.54□□□□□ -1.52
CCDC39-203ENST00000473854 IER5Q5VY09 327 aa5.53□□□□□ -1.52
CCDC39-203ENST00000473854 ELMSAN1Q6PJG2 1045 aa5.53□□□□□ -1.52
CCDC39-203ENST00000473854 TNS4Q8IZW8 715 aa5.53□□□□□ -1.52
CCDC39-203ENST00000473854 TMEM130Q8N3G9 435 aa5.53□□□□□ -1.52
CCDC39-203ENST00000473854 MAP3K6O95382 1288 aa5.52□□□□□ -1.53
CCDC39-203ENST00000473854 IGLV1-40P01703 118 aa5.52□□□□□ -1.53
CCDC39-203ENST00000473854 TBCELQ5QJ74 424 aa5.52□□□□□ -1.53
CCDC39-203ENST00000473854 MAP4K3Q8IVH8 894 aa5.52□□□□□ -1.53
CCDC39-203ENST00000473854 GSX2Q9BZM3 304 aa5.52□□□□□ -1.53
CCDC39-203ENST00000473854 RAXQ9Y2V3 346 aa5.52□□□□□ -1.53
CCDC39-203ENST00000473854 M0R2N6 131 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 DLL1O00548 723 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 SKIP12755 728 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 CPB1P15086 417 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 NFKB1P19838 968 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 ATP1A2P50993 1020 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 BRPF1P55201 1214 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-203ENST00000473854 NEUROD2Q15784 382 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 SH3PXD2AQ5TCZ1 1133 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 ZNF280CQ8ND82 737 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 LPIN3Q9BQK8 851 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 C11orf16Q9NQ32 467 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 HCN4Q9Y3Q4 1203 aa5.51□□□□□ -1.53
CCDC39-203ENST00000473854 GRIK5Q16478 980 aa5.5□□□□□ -1.53
CCDC39-203ENST00000473854 STAG2Q8N3U4 1231 aa5.5□□□□□ -1.53
CCDC39-203ENST00000473854 F8W735 103 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-203ENST00000473854 ABL2P42684 1182 aa5.49□□□□□ -1.53
CCDC39-203ENST00000473854 NCOA4Q13772 614 aa5.49□□□□□ -1.53
CCDC39-203ENST00000473854 Q6ZS46 218 aa5.49□□□□□ -1.53
CCDC39-203ENST00000473854 GAS2L2Q8NHY3 880 aa5.49□□□□□ -1.53
CCDC39-203ENST00000473854 TRPM4Q8TD43 1214 aa5.49□□□□□ -1.53
CCDC39-203ENST00000473854 TSPAN10Q9H1Z9 355 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-203ENST00000473854 STOML1Q9UBI4 398 aa5.49□□□□□ -1.53
CCDC39-203ENST00000473854 RBM19Q9Y4C8 960 aaKnown RBP5.49□□□□□ -1.53
CCDC39-203ENST00000473854 TGFBR3LH3BV60 316 aa5.48□□□□□ -1.53
CCDC39-203ENST00000473854 DHX15O43143 795 aaKnown RBP5.48□□□□□ -1.53
CCDC39-203ENST00000473854 PPP1R12BO60237 982 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-203ENST00000473854 GPLD1P80108 840 aa5.48□□□□□ -1.53
CCDC39-203ENST00000473854 PERM1Q5SV97 790 aa5.48□□□□□ -1.53
CCDC39-203ENST00000473854 ALDH16A1Q8IZ83 802 aa5.48□□□□□ -1.53
CCDC39-203ENST00000473854 TPCN2Q8NHX9 752 aa5.48□□□□□ -1.53
CCDC39-203ENST00000473854 PIK3CDO00329 1044 aa5.47□□□□□ -1.53
CCDC39-203ENST00000473854 DEAF1O75398 565 aaPredicted RBP5.47□□□□□ -1.53
CCDC39-203ENST00000473854 WNT11O96014 354 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms