RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 RGL2O15211 777 aa14.36□□□□□ -0.11
SSBP1-209ENST00000473783 A1BGP04217 495 aa14.36□□□□□ -0.11
SSBP1-209ENST00000473783 IL13P35225 146 aa14.36□□□□□ -0.11
SSBP1-209ENST00000473783 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
SSBP1-209ENST00000473783 CDC37L1Q7L3B6 337 aa14.36□□□□□ -0.11
SSBP1-209ENST00000473783 NIM1KQ8IY84 436 aa14.36□□□□□ -0.11
SSBP1-209ENST00000473783 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
SSBP1-209ENST00000473783 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
SSBP1-209ENST00000473783 FAM155AB1AL88 458 aaPredicted RBP14.35□□□□□ -0.11
SSBP1-209ENST00000473783 TRPA1O75762 1119 aa14.35□□□□□ -0.11
SSBP1-209ENST00000473783 PKN2Q16513 984 aaKnown RBP14.35□□□□□ -0.11
SSBP1-209ENST00000473783 CRY2Q49AN0 593 aa14.35□□□□□ -0.11
SSBP1-209ENST00000473783 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
SSBP1-209ENST00000473783 RGMBQ6NW40 437 aa14.34□□□□□ -0.11
SSBP1-209ENST00000473783 CCDC102AQ96A19 550 aa14.34□□□□□ -0.11
SSBP1-209ENST00000473783 NPC1L1Q9UHC9 1359 aa14.34□□□□□ -0.11
SSBP1-209ENST00000473783 MTHFSDQ2M296 383 aaKnown RBP14.33□□□□□ -0.12
SSBP1-209ENST00000473783 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
SSBP1-209ENST00000473783 NIP7Q9Y221 180 aaKnown RBP eCLIP14.33□□□□□ -0.12
SSBP1-209ENST00000473783 POLR2AP24928 1970 aaKnown RBP14.33□□□□□ -0.12
SSBP1-209ENST00000473783 KIF23Q02241 960 aaPredicted RBP14.32□□□□□ -0.12
SSBP1-209ENST00000473783 TEFQ10587 303 aa14.32□□□□□ -0.12
SSBP1-209ENST00000473783 VPS33BQ9H267 617 aa14.32□□□□□ -0.12
SSBP1-209ENST00000473783 PPIP5K2O43314 1243 aa14.31□□□□□ -0.12
SSBP1-209ENST00000473783 GTF2E1P29083 439 aaPredicted RBP14.31□□□□□ -0.12
SSBP1-209ENST00000473783 GMPSP49915 693 aaPredicted RBP14.31□□□□□ -0.12
SSBP1-209ENST00000473783 RIC1Q4ADV7 1423 aa14.31□□□□□ -0.12
SSBP1-209ENST00000473783 HOXA10P31260 410 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-209ENST00000473783 FXR1P51114 621 aaKnown RBP eCLIP14.3□□□□□ -0.12
SSBP1-209ENST00000473783 HIRAP54198 1017 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-209ENST00000473783 CXCL9Q07325 125 aa14.3□□□□□ -0.12
SSBP1-209ENST00000473783 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-209ENST00000473783 ZNRF3Q9ULT6 936 aa14.3□□□□□ -0.12
SSBP1-209ENST00000473783 KIF7Q2M1P5 1343 aa14.3□□□□□ -0.12
SSBP1-209ENST00000473783 CUL9Q8IWT3 2517 aa14.3□□□□□ -0.12
SSBP1-209ENST00000473783 HMOX1P09601 288 aa14.29□□□□□ -0.12
SSBP1-209ENST00000473783 ZNF157P51786 506 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-209ENST00000473783 AOC3Q16853 763 aa14.29□□□□□ -0.12
SSBP1-209ENST00000473783 MORC1Q86VD1 984 aa14.29□□□□□ -0.12
SSBP1-209ENST00000473783 C2orf69Q8N8R5 385 aa14.29□□□□□ -0.12
SSBP1-209ENST00000473783 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
SSBP1-209ENST00000473783 GBA2Q9HCG7 927 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-209ENST00000473783 ABCC12Q96J65 1359 aa14.29□□□□□ -0.12
SSBP1-209ENST00000473783 KIAA0100Q14667 2235 aaKnown RBP14.29□□□□□ -0.12
SSBP1-209ENST00000473783 FAM177BA6PVY3 158 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 CEP290O15078 2479 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 SLC10A3P09131 477 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 MKI67P46013 3256 aaKnown RBP14.28□□□□□ -0.12
SSBP1-209ENST00000473783 USP48Q86UV5 1035 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 TRPM4Q8TD43 1214 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 CSRNP1Q96S65 589 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 BCL2L13Q9BXK5 485 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 NYXQ9GZU5 481 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 TRIOBPQ9H2D6 2365 aa14.28□□□□□ -0.12
SSBP1-209ENST00000473783 PPEF1O14829 653 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-209ENST00000473783 CRAMP1Q96RY5 1269 aa14.27□□□□□ -0.13
SSBP1-209ENST00000473783 HDAC9Q9UKV0 1011 aa14.27□□□□□ -0.13
SSBP1-209ENST00000473783 NUP98P52948 1817 aa14.27□□□□□ -0.13
SSBP1-209ENST00000473783 PIP4K2AP48426 406 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-209ENST00000473783 TNIP1Q15025 636 aa14.26□□□□□ -0.13
SSBP1-209ENST00000473783 SUPT20HQ8NEM7 779 aa14.26□□□□□ -0.13
SSBP1-209ENST00000473783 IL17REQ8NFR9 667 aa14.26□□□□□ -0.13
SSBP1-209ENST00000473783 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-209ENST00000473783 USP16Q9Y5T5 823 aa14.26□□□□□ -0.13
SSBP1-209ENST00000473783 RBBP6Q7Z6E9 1792 aaKnown RBP14.25□□□□□ -0.13
SSBP1-209ENST00000473783 H7C1D1 291 aa14.25□□□□□ -0.13
SSBP1-209ENST00000473783 FBXO46Q6PJ61 603 aaPredicted RBP14.25□□□□□ -0.13
SSBP1-209ENST00000473783 KRT26Q7Z3Y9 468 aa14.25□□□□□ -0.13
SSBP1-209ENST00000473783 RBM17Q96I25 401 aaKnown RBP14.25□□□□□ -0.13
SSBP1-209ENST00000473783 CNOT7Q9UIV1 285 aaKnown RBP14.25□□□□□ -0.13
SSBP1-209ENST00000473783 IBTKQ9P2D0 1353 aaPredicted RBP14.24□□□□□ -0.13
SSBP1-209ENST00000473783 GNAT3A8MTJ3 354 aa14.24□□□□□ -0.13
SSBP1-209ENST00000473783 POTEDQ86YR6 584 aa14.24□□□□□ -0.13
SSBP1-209ENST00000473783 RTFDC1Q9BY42 306 aaPredicted RBP14.24□□□□□ -0.13
SSBP1-209ENST00000473783 CEMIPQ8WUJ3 1361 aa14.23□□□□□ -0.13
SSBP1-209ENST00000473783 HLFQ16534 295 aa14.23□□□□□ -0.13
SSBP1-209ENST00000473783 NOM1Q5C9Z4 860 aaKnown RBP14.23□□□□□ -0.13
SSBP1-209ENST00000473783 DLK2Q6UY11 383 aa14.23□□□□□ -0.13
SSBP1-209ENST00000473783 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
SSBP1-209ENST00000473783 ZNF296Q8WUU4 475 aaPredicted RBP14.23□□□□□ -0.13
SSBP1-209ENST00000473783 POLR3GLQ9BT43 218 aa14.23□□□□□ -0.13
SSBP1-209ENST00000473783 BTBD11A6QL63 1104 aa14.22□□□□□ -0.13
SSBP1-209ENST00000473783 TCERG1O14776 1098 aaKnown RBP14.22□□□□□ -0.13
SSBP1-209ENST00000473783 RAD17O75943 681 aa14.22□□□□□ -0.13
SSBP1-209ENST00000473783 KIAA2012Q0VF49 1180 aa14.22□□□□□ -0.13
SSBP1-209ENST00000473783 SLC51AQ86UW1 340 aa14.22□□□□□ -0.13
SSBP1-209ENST00000473783 MICALL2Q8IY33 904 aa14.22□□□□□ -0.13
SSBP1-209ENST00000473783 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
SSBP1-209ENST00000473783 PANK3Q9H999 370 aa14.22□□□□□ -0.13
SSBP1-209ENST00000473783 ATP6V0A2Q9Y487 856 aa14.22□□□□□ -0.13
SSBP1-209ENST00000473783 NBPF26B4DH59 902 aa14.21□□□□□ -0.13
SSBP1-209ENST00000473783 KCNQ3O43525 872 aa14.21□□□□□ -0.13
SSBP1-209ENST00000473783 SNRPA1P09661 255 aaKnown RBP14.21□□□□□ -0.13
SSBP1-209ENST00000473783 NBPF10Q6P3W6 841 aaKnown RBP14.21□□□□□ -0.13
SSBP1-209ENST00000473783 RASAL3Q86YV0 1011 aa14.21□□□□□ -0.13
SSBP1-209ENST00000473783 DPF2Q92785 391 aa14.21□□□□□ -0.13
SSBP1-209ENST00000473783 DCPSQ96C86 337 aaKnown RBP14.21□□□□□ -0.13
SSBP1-209ENST00000473783 LAMB4A4D0S4 1761 aa14.21□□□□□ -0.13
SSBP1-209ENST00000473783 SHTN1A0MZ66 631 aa14.2□□□□□ -0.14
SSBP1-209ENST00000473783 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms