RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 RGL2O15211 777 aa21.92■■□□□ 1.1
HPS4-210ENST00000473782 LMOD1P29536 600 aaPredicted RBP21.92■■□□□ 1.1
HPS4-210ENST00000473782 CFAP44Q96MT7 982 aa21.92■■□□□ 1.1
HPS4-210ENST00000473782 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
HPS4-210ENST00000473782 COL3A1P02461 1466 aaPredicted RBP21.91■■□□□ 1.1
HPS4-210ENST00000473782 BTBD11A6QL63 1104 aa21.91■■□□□ 1.1
HPS4-210ENST00000473782 CA12O43570 354 aa21.91■■□□□ 1.1
HPS4-210ENST00000473782 ZIC5Q96T25 663 aa21.91■■□□□ 1.1
HPS4-210ENST00000473782 ZNF652Q9Y2D9 606 aa21.91■■□□□ 1.1
HPS4-210ENST00000473782 BRPF1P55201 1214 aaPredicted RBP21.9■■□□□ 1.1
HPS4-210ENST00000473782 DGKZQ13574 1117 aa21.9■■□□□ 1.1
HPS4-210ENST00000473782 GAS2L2Q8NHY3 880 aa21.9■■□□□ 1.1
HPS4-210ENST00000473782 HHIPL1Q96JK4 782 aa21.9■■□□□ 1.1
HPS4-210ENST00000473782 EIF4G2P78344 907 aaKnown RBP eCLIP21.89■■□□□ 1.09
HPS4-210ENST00000473782 CELF2O95319 508 aaKnown RBP21.88■■□□□ 1.09
HPS4-210ENST00000473782 HOXA10P31260 410 aaPredicted RBP21.88■■□□□ 1.09
HPS4-210ENST00000473782 CC2D2BQ6DHV5 1058 aa21.88■■□□□ 1.09
HPS4-210ENST00000473782 CIAPIN1Q6FI81 312 aa21.88■■□□□ 1.09
HPS4-210ENST00000473782 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
HPS4-210ENST00000473782 GPRC5DQ9NZD1 345 aa21.88■■□□□ 1.09
HPS4-210ENST00000473782 PGAP2Q9UHJ9 254 aa21.88■■□□□ 1.09
HPS4-210ENST00000473782 NUTM1Q86Y26 1132 aa21.87■■□□□ 1.09
HPS4-210ENST00000473782 LARGE2Q8N3Y3 721 aa21.87■■□□□ 1.09
HPS4-210ENST00000473782 GLIS2Q9BZE0 524 aaPredicted RBP21.87■■□□□ 1.09
HPS4-210ENST00000473782 ADARB2Q9NS39 739 aaKnown RBP21.87■■□□□ 1.09
HPS4-210ENST00000473782 PER1O15534 1290 aaPredicted RBP21.86■■□□□ 1.09
HPS4-210ENST00000473782 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
HPS4-210ENST00000473782 HIRAP54198 1017 aaPredicted RBP21.85■■□□□ 1.09
HPS4-210ENST00000473782 CXCL9Q07325 125 aa21.83■■□□□ 1.09
HPS4-210ENST00000473782 KIF7Q2M1P5 1343 aa21.82■■□□□ 1.08
HPS4-210ENST00000473782 RIC1Q4ADV7 1423 aa21.82■■□□□ 1.08
HPS4-210ENST00000473782 C3orf67Q6ZVT6 689 aa21.82■■□□□ 1.08
HPS4-210ENST00000473782 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
HPS4-210ENST00000473782 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
HPS4-210ENST00000473782 GTF2E1P29083 439 aaPredicted RBP21.81■■□□□ 1.08
HPS4-210ENST00000473782 AOC3Q16853 763 aa21.81■■□□□ 1.08
HPS4-210ENST00000473782 GRIPAP1Q4V328 841 aa21.81■■□□□ 1.08
HPS4-210ENST00000473782 DLK2Q6UY11 383 aa21.81■■□□□ 1.08
HPS4-210ENST00000473782 NIM1KQ8IY84 436 aa21.81■■□□□ 1.08
HPS4-210ENST00000473782 SOX10P56693 466 aa21.8■■□□□ 1.08
HPS4-210ENST00000473782 CRAMP1Q96RY5 1269 aa21.8■■□□□ 1.08
HPS4-210ENST00000473782 UBN2Q6ZU65 1347 aa21.8■■□□□ 1.08
HPS4-210ENST00000473782 PPIP5K2O43314 1243 aa21.79■■□□□ 1.08
HPS4-210ENST00000473782 GMPSP49915 693 aaPredicted RBP21.79■■□□□ 1.08
HPS4-210ENST00000473782 CC2D1BQ5T0F9 858 aaKnown RBP21.79■■□□□ 1.08
HPS4-210ENST00000473782 SHTN1A0MZ66 631 aa21.78■■□□□ 1.08
HPS4-210ENST00000473782 FAM155AB1AL88 458 aaPredicted RBP21.78■■□□□ 1.08
HPS4-210ENST00000473782 TCERG1O14776 1098 aaKnown RBP21.78■■□□□ 1.08
HPS4-210ENST00000473782 PPEF1O14829 653 aaPredicted RBP21.78■■□□□ 1.08
HPS4-210ENST00000473782 MCM10Q7L590 875 aa21.78■■□□□ 1.08
HPS4-210ENST00000473782 TRPM4Q8TD43 1214 aa21.78■■□□□ 1.08
HPS4-210ENST00000473782 NYXQ9GZU5 481 aa21.78■■□□□ 1.08
HPS4-210ENST00000473782 RSPH6AQ9H0K4 717 aa21.78■■□□□ 1.08
HPS4-210ENST00000473782 ZNF408Q9H9D4 720 aa21.78■■□□□ 1.08
HPS4-210ENST00000473782 ERVV-1B6SEH8 477 aa21.77■■□□□ 1.08
HPS4-210ENST00000473782 NOGQ13253 232 aa21.77■■□□□ 1.08
HPS4-210ENST00000473782 SUSD4Q5VX71 490 aa21.77■■□□□ 1.08
HPS4-210ENST00000473782 ZC3H15Q8WU90 426 aaKnown RBP21.77■■□□□ 1.08
HPS4-210ENST00000473782 RPGRQ92834 1020 aaKnown RBP21.77■■□□□ 1.08
HPS4-210ENST00000473782 ZNRF3Q9ULT6 936 aa21.77■■□□□ 1.08
HPS4-210ENST00000473782 PRKAR2BP31323 418 aa21.76■■□□□ 1.07
HPS4-210ENST00000473782 RTFDC1Q9BY42 306 aaPredicted RBP21.76■■□□□ 1.07
HPS4-210ENST00000473782 VPS33BQ9H267 617 aa21.76■■□□□ 1.07
HPS4-210ENST00000473782 DCTN1Q14203 1278 aa21.75■■□□□ 1.07
HPS4-210ENST00000473782 PRPF38BQ5VTL8 546 aaKnown RBP21.75■■□□□ 1.07
HPS4-210ENST00000473782 TTLL7Q6ZT98 887 aa21.75■■□□□ 1.07
HPS4-210ENST00000473782 CDC37L1Q7L3B6 337 aa21.75■■□□□ 1.07
HPS4-210ENST00000473782 RBM17Q96I25 401 aaKnown RBP21.75■■□□□ 1.07
HPS4-210ENST00000473782 IBTKQ9P2D0 1353 aaPredicted RBP21.74■■□□□ 1.07
HPS4-210ENST00000473782 ATP6V0A2Q9Y487 856 aa21.74■■□□□ 1.07
HPS4-210ENST00000473782 MAP3K15Q6ZN16 1313 aa21.74■■□□□ 1.07
HPS4-210ENST00000473782 NTSR2O95665 410 aa21.73■■□□□ 1.07
HPS4-210ENST00000473782 GPTP24298 496 aa21.73■■□□□ 1.07
HPS4-210ENST00000473782 HUNKP57058 714 aa21.73■■□□□ 1.07
HPS4-210ENST00000473782 USP48Q86UV5 1035 aa21.73■■□□□ 1.07
HPS4-210ENST00000473782 ZNF34Q8IZ26 560 aa21.73■■□□□ 1.07
HPS4-210ENST00000473782 NGEFQ8N5V2 710 aa21.73■■□□□ 1.07
HPS4-210ENST00000473782 NUP98P52948 1817 aa21.72■■□□□ 1.07
HPS4-210ENST00000473782 SAGE1Q9NXZ1 904 aa21.72■■□□□ 1.07
HPS4-210ENST00000473782 CDHR2Q9BYE9 1310 aa21.72■■□□□ 1.07
HPS4-210ENST00000473782 YDJCA8MPS7 323 aa21.71■■□□□ 1.07
HPS4-210ENST00000473782 RAD17O75943 681 aa21.71■■□□□ 1.07
HPS4-210ENST00000473782 RNF186Q9NXI6 227 aa21.71■■□□□ 1.07
HPS4-210ENST00000473782 MIS18AQ9NYP9 233 aa21.71■■□□□ 1.07
HPS4-210ENST00000473782 CNOT7Q9UIV1 285 aaKnown RBP21.7■■□□□ 1.06
HPS4-210ENST00000473782 KIF23Q02241 960 aaPredicted RBP21.69■■□□□ 1.06
HPS4-210ENST00000473782 KIAA2012Q0VF49 1180 aa21.69■■□□□ 1.06
HPS4-210ENST00000473782 RGMBQ6NW40 437 aa21.69■■□□□ 1.06
HPS4-210ENST00000473782 ABCC4O15439 1325 aa21.69■■□□□ 1.06
HPS4-210ENST00000473782 TRPA1O75762 1119 aa21.68■■□□□ 1.06
HPS4-210ENST00000473782 EGFRP00533 1210 aa21.67■■□□□ 1.06
HPS4-210ENST00000473782 SLC10A5Q5PT55 438 aa21.67■■□□□ 1.06
HPS4-210ENST00000473782 ZBTB3Q9H5J0 574 aa21.67■■□□□ 1.06
HPS4-210ENST00000473782 TAF7Q15545 349 aaPredicted RBP21.66■■□□□ 1.06
HPS4-210ENST00000473782 SAMD7Q7Z3H4 446 aa21.66■■□□□ 1.06
HPS4-210ENST00000473782 MICALL2Q8IY33 904 aa21.66■■□□□ 1.06
HPS4-210ENST00000473782 SUPT20HQ8NEM7 779 aa21.66■■□□□ 1.06
HPS4-210ENST00000473782 BCL2L13Q9BXK5 485 aa21.66■■□□□ 1.06
HPS4-210ENST00000473782 LAMB4A4D0S4 1761 aa21.66■■□□□ 1.06
HPS4-210ENST00000473782 TNIP1Q15025 636 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms